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Items: 1 to 50 of 96

1.

[Artificial Intelligence and Brain Science: the Present and the Future].

Doya K, Matsuo Y.

Brain Nerve. 2019 Jul;71(7):649-655. doi: 10.11477/mf.1416201337. Review. Japanese.

PMID:
31289239
2.

Identification of depression subtypes and relevant brain regions using a data-driven approach.

Tokuda T, Yoshimoto J, Shimizu Y, Okada G, Takamura M, Okamoto Y, Yamawaki S, Doya K.

Sci Rep. 2018 Sep 20;8(1):14082. doi: 10.1038/s41598-018-32521-z.

3.

Reward probability and timing uncertainty alter the effect of dorsal raphe serotonin neurons on patience.

Miyazaki K, Miyazaki KW, Yamanaka A, Tokuda T, Tanaka KF, Doya K.

Nat Commun. 2018 Jun 1;9(1):2048. doi: 10.1038/s41467-018-04496-y.

4.

Connectivity inference from neural recording data: Challenges, mathematical bases and research directions.

Magrans de Abril I, Yoshimoto J, Doya K.

Neural Netw. 2018 Jun;102:120-137. doi: 10.1016/j.neunet.2018.02.016. Epub 2018 Mar 10. Review.

5.

Reward-Predictive Neural Activities in Striatal Striosome Compartments.

Yoshizawa T, Ito M, Doya K.

eNeuro. 2018 Feb 5;5(1). pii: ENEURO.0367-17.2018. doi: 10.1523/ENEURO.0367-17.2018. eCollection 2018 Jan-Feb.

6.

Sigmoid-weighted linear units for neural network function approximation in reinforcement learning.

Elfwing S, Uchibe E, Doya K.

Neural Netw. 2018 Nov;107:3-11. doi: 10.1016/j.neunet.2017.12.012. Epub 2018 Jan 11.

7.

Multiple co-clustering based on nonparametric mixture models with heterogeneous marginal distributions.

Tokuda T, Yoshimoto J, Shimizu Y, Okada G, Takamura M, Okamoto Y, Yamawaki S, Doya K.

PLoS One. 2017 Oct 19;12(10):e0186566. doi: 10.1371/journal.pone.0186566. eCollection 2017.

8.

Prediction of clinical depression scores and detection of changes in whole-brain using resting-state functional MRI data with partial least squares regression.

Yoshida K, Shimizu Y, Yoshimoto J, Takamura M, Okada G, Okamoto Y, Yamawaki S, Doya K.

PLoS One. 2017 Jul 12;12(7):e0179638. doi: 10.1371/journal.pone.0179638. eCollection 2017.

9.

Computational Model of Recurrent Subthalamo-Pallidal Circuit for Generation of Parkinsonian Oscillations.

Shouno O, Tachibana Y, Nambu A, Doya K.

Front Neuroanat. 2017 Mar 21;11:21. doi: 10.3389/fnana.2017.00021. eCollection 2017.

10.

Sparse kernel canonical correlation analysis for discovery of nonlinear interactions in high-dimensional data.

Yoshida K, Yoshimoto J, Doya K.

BMC Bioinformatics. 2017 Feb 14;18(1):108. doi: 10.1186/s12859-017-1543-x.

11.

Adaptive Baseline Enhances EM-Based Policy Search: Validation in a View-Based Positioning Task of a Smartphone Balancer.

Wang J, Uchibe E, Doya K.

Front Neurorobot. 2017 Jan 23;11:1. doi: 10.3389/fnbot.2017.00001. eCollection 2017.

12.

Brain computation mechanism of prediction and decision making by dorsal raphe serotonin neurons.

Miyazaki K, Miyazaki K, Doya K.

Nihon Yakurigaku Zasshi. 2017;149(1):34-39. doi: 10.1254/fpj.149.34. Japanese. No abstract available.

PMID:
28049876
13.

Neural substrate of dynamic Bayesian inference in the cerebral cortex.

Funamizu A, Kuhn B, Doya K.

Nat Neurosci. 2016 Dec;19(12):1682-1689. doi: 10.1038/nn.4390. Epub 2016 Sep 19.

PMID:
27643432
14.

From free energy to expected energy: Improving energy-based value function approximation in reinforcement learning.

Elfwing S, Uchibe E, Doya K.

Neural Netw. 2016 Dec;84:17-27. doi: 10.1016/j.neunet.2016.07.013. Epub 2016 Aug 26.

15.

Model-based action planning involves cortico-cerebellar and basal ganglia networks.

Fermin AS, Yoshida T, Yoshimoto J, Ito M, Tanaka SC, Doya K.

Sci Rep. 2016 Aug 19;6:31378. doi: 10.1038/srep31378.

16.

Consensus Paper: Towards a Systems-Level View of Cerebellar Function: the Interplay Between Cerebellum, Basal Ganglia, and Cortex.

Caligiore D, Pezzulo G, Baldassarre G, Bostan AC, Strick PL, Doya K, Helmich RC, Dirkx M, Houk J, Jörntell H, Lago-Rodriguez A, Galea JM, Miall RC, Popa T, Kishore A, Verschure PF, Zucca R, Herreros I.

Cerebellum. 2017 Feb;16(1):203-229. doi: 10.1007/s12311-016-0763-3.

17.

Parallel Representation of Value-Based and Finite State-Based Strategies in the Ventral and Dorsal Striatum.

Ito M, Doya K.

PLoS Comput Biol. 2015 Nov 3;11(11):e1004540. doi: 10.1371/journal.pcbi.1004540. eCollection 2015 Nov.

18.

Toward Probabilistic Diagnosis and Understanding of Depression Based on Functional MRI Data Analysis with Logistic Group LASSO.

Shimizu Y, Yoshimoto J, Toki S, Takamura M, Yoshimura S, Okamoto Y, Yamawaki S, Doya K.

PLoS One. 2015 May 1;10(5):e0123524. doi: 10.1371/journal.pone.0123524. eCollection 2015.

19.

Condition interference in rats performing a choice task with switched variable- and fixed-reward conditions.

Funamizu A, Ito M, Doya K, Kanzaki R, Takahashi H.

Front Neurosci. 2015 Feb 13;9:27. doi: 10.3389/fnins.2015.00027. eCollection 2015.

20.

A spiking neural network model of model-free reinforcement learning with high-dimensional sensory input and perceptual ambiguity.

Nakano T, Otsuka M, Yoshimoto J, Doya K.

PLoS One. 2015 Mar 3;10(3):e0115620. doi: 10.1371/journal.pone.0115620. eCollection 2015.

21.
22.

[Brain mechanisms of depression--preliminary evidence from fMRI studies].

Okada G, Okamoto Y, Shishida K, Ueda K, Onoda K, Kunisato Y, Tanaka SC, Doya K, Yamawaki S.

Seishin Shinkeigaku Zasshi. 2014;116(10):825-31. Japanese.

PMID:
25672209
23.

Expected energy-based restricted Boltzmann machine for classification.

Elfwing S, Uchibe E, Doya K.

Neural Netw. 2015 Apr;64:29-38. doi: 10.1016/j.neunet.2014.09.006. Epub 2014 Sep 28.

24.

Optogenetic activation of dorsal raphe serotonin neurons enhances patience for future rewards.

Miyazaki KW, Miyazaki K, Tanaka KF, Yamanaka A, Takahashi A, Tabuchi S, Doya K.

Curr Biol. 2014 Sep 8;24(17):2033-40. doi: 10.1016/j.cub.2014.07.041. Epub 2014 Aug 21.

25.

Emergence of polymorphic mating strategies in robot colonies.

Elfwing S, Doya K.

PLoS One. 2014 Apr 9;9(4):e93622. doi: 10.1371/journal.pone.0093622. eCollection 2014.

26.

A model-based prediction of the calcium responses in the striatal synaptic spines depending on the timing of cortical and dopaminergic inputs and post-synaptic spikes.

Nakano T, Yoshimoto J, Doya K.

Front Comput Neurosci. 2013 Sep 13;7:119. doi: 10.3389/fncom.2013.00119. eCollection 2013.

27.

Evaluation of linearly solvable Markov decision process with dynamic model learning in a mobile robot navigation task.

Kinjo K, Uchibe E, Doya K.

Front Neurorobot. 2013 Apr 5;7:7. doi: 10.3389/fnbot.2013.00007. eCollection 2013.

28.

Scaled free-energy based reinforcement learning for robust and efficient learning in high-dimensional state spaces.

Elfwing S, Uchibe E, Doya K.

Front Neurorobot. 2013 Feb 28;7:3. doi: 10.3389/fnbot.2013.00003. eCollection 2013.

29.

The mechanism of saccade motor pattern generation investigated by a large-scale spiking neuron model of the superior colliculus.

Morén J, Shibata T, Doya K.

PLoS One. 2013;8(2):e57134. doi: 10.1371/journal.pone.0057134. Epub 2013 Feb 19.

30.

Decision making.

Doya K, Shadlen MN.

Curr Opin Neurobiol. 2012 Dec;22(6):911-3. doi: 10.1016/j.conb.2012.10.003. Epub 2012 Nov 21. No abstract available.

PMID:
23177659
31.

Activation of dorsal raphe serotonin neurons is necessary for waiting for delayed rewards.

Miyazaki KW, Miyazaki K, Doya K.

J Neurosci. 2012 Aug 1;32(31):10451-7. doi: 10.1523/JNEUROSCI.0915-12.2012.

32.

[Effects of serotonin on delay discounting for rewards--an application for understanding of pathophysiology in psychiatric disorders].

Okamoto Y, Okada G, Shishida K, Fukumoto T, Machino A, Yamashita H, Tanaka SC, Doya K, Yamawaki S.

Seishin Shinkeigaku Zasshi. 2012;114(2):108-14. Japanese.

PMID:
22568113
33.

Uncertainty in action-value estimation affects both action choice and learning rate of the choice behaviors of rats.

Funamizu A, Ito M, Doya K, Kanzaki R, Takahashi H.

Eur J Neurosci. 2012 Apr;35(7):1180-9. doi: 10.1111/j.1460-9568.2012.08025.x.

34.

The role of serotonin in the regulation of patience and impulsivity.

Miyazaki K, Miyazaki KW, Doya K.

Mol Neurobiol. 2012 Apr;45(2):213-24. doi: 10.1007/s12035-012-8232-6. Epub 2012 Jan 20. Review.

35.

Neural and personality correlates of individual differences related to the effects of acute tryptophan depletion on future reward evaluation.

Demoto Y, Okada G, Okamoto Y, Kunisato Y, Aoyama S, Onoda K, Munakata A, Nomura M, Tanaka SC, Schweighofer N, Doya K, Yamawaki S.

Neuropsychobiology. 2012;65(2):55-64. doi: 10.1159/000328990. Epub 2012 Jan 5.

PMID:
22222380
36.

MOSAIC for multiple-reward environments.

Sugimoto N, Haruno M, Doya K, Kawato M.

Neural Comput. 2012 Mar;24(3):577-606. doi: 10.1162/NECO_a_00246. Epub 2011 Dec 14.

PMID:
22168558
37.

Changing the structure of complex visuo-motor sequences selectively activates the fronto-parietal network.

Pammi VS, Miyapuram KP, Ahmed, Samejima K, Bapi RS, Doya K.

Neuroimage. 2012 Jan 16;59(2):1180-9. doi: 10.1016/j.neuroimage.2011.08.006. Epub 2011 Aug 16.

PMID:
21867758
38.

Multi-scale, multi-modal neural modeling and simulation.

Ishii S, Diesmann M, Doya K.

Neural Netw. 2011 Nov;24(9):917. doi: 10.1016/j.neunet.2011.07.004. Epub 2011 Jul 14. No abstract available.

PMID:
21840687
39.

Inter-individual discount factor differences in reward prediction are topographically associated with caudate activation.

Onoda K, Okamoto Y, Kunisato Y, Aoyama S, Shishida K, Okada G, Tanaka SC, Schweighofer N, Yamaguchi S, Doya K, Yamawaki S.

Exp Brain Res. 2011 Aug;212(4):593-601. doi: 10.1007/s00221-011-2771-3. Epub 2011 Jun 22.

PMID:
21695536
40.

Multiple representations and algorithms for reinforcement learning in the cortico-basal ganglia circuit.

Ito M, Doya K.

Curr Opin Neurobiol. 2011 Jun;21(3):368-73. doi: 10.1016/j.conb.2011.04.001. Epub 2011 Apr 29. Review.

PMID:
21531544
41.

Activation of dorsal raphe serotonin neurons underlies waiting for delayed rewards.

Miyazaki K, Miyazaki KW, Doya K.

J Neurosci. 2011 Jan 12;31(2):469-79. doi: 10.1523/JNEUROSCI.3714-10.2011.

42.

Evidence for model-based action planning in a sequential finger movement task.

Fermin A, Yoshida T, Ito M, Yoshimoto J, Doya K.

J Mot Behav. 2010 Nov;42(6):371-9. doi: 10.1080/00222895.2010.526467.

PMID:
21184355
43.

An excellent year and a transition.

Doya K, Grossberg S, Taylor JG, Wang D.

Neural Netw. 2011 Jan;24(1):1. doi: 10.1016/j.neunet.2010.11.004. No abstract available.

PMID:
21118747
44.

Activation of the central serotonergic system in response to delayed but not omitted rewards.

Miyazaki KW, Miyazaki K, Doya K.

Eur J Neurosci. 2011 Jan;33(1):153-60. doi: 10.1111/j.1460-9568.2010.07480.x. Epub 2010 Nov 11.

45.

A kinetic model of dopamine- and calcium-dependent striatal synaptic plasticity.

Nakano T, Doi T, Yoshimoto J, Doya K.

PLoS Comput Biol. 2010 Feb 12;6(2):e1000670. doi: 10.1371/journal.pcbi.1000670.

46.

A computational neural model of goal-directed utterance selection.

Klein M, Kamp H, Palm G, Doya K.

Neural Netw. 2010 Jun;23(5):592-606. doi: 10.1016/j.neunet.2010.01.003. Epub 2010 Jan 13.

PMID:
20116973
47.

Serotonin affects association of aversive outcomes to past actions.

Tanaka SC, Shishida K, Schweighofer N, Okamoto Y, Yamawaki S, Doya K.

J Neurosci. 2009 Dec 16;29(50):15669-74. doi: 10.1523/JNEUROSCI.2799-09.2009.

48.

Editorial for 2010.

Doya K, Grossberg S, Taylor JG.

Neural Netw. 2010 Jan;23(1):1. doi: 10.1016/j.neunet.2009.11.006. Epub 2009 Nov 12. No abstract available.

PMID:
19942405
49.

Derivatives of logarithmic stationary distributions for policy gradient reinforcement learning.

Morimura T, Uchibe E, Yoshimoto J, Peters J, Doya K.

Neural Comput. 2010 Feb;22(2):342-76. doi: 10.1162/neco.2009.12-08-922.

PMID:
19842990
50.

Validation of decision-making models and analysis of decision variables in the rat basal ganglia.

Ito M, Doya K.

J Neurosci. 2009 Aug 5;29(31):9861-74. doi: 10.1523/JNEUROSCI.6157-08.2009.

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