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Items: 1 to 50 of 129

1.

CRISPR-Cas, DNA Supercoiling, and Nucleoid-Associated Proteins.

Dorman CJ, Ní Bhriain N.

Trends Microbiol. 2019 Sep 10. pii: S0966-842X(19)30217-3. doi: 10.1016/j.tim.2019.08.004. [Epub ahead of print] Review.

PMID:
31519332
2.

DNA supercoiling and transcription in bacteria: a two-way street.

Dorman CJ.

BMC Mol Cell Biol. 2019 Jul 18;20(1):26. doi: 10.1186/s12860-019-0211-6. Review.

3.

Regulatory Hierarchies Controlling Virulence Gene Expression in Shigella flexneri and Vibrio cholerae.

Dorman MJ, Dorman CJ.

Front Microbiol. 2018 Nov 9;9:2686. doi: 10.3389/fmicb.2018.02686. eCollection 2018. Review.

4.

Negative supercoiling of DNA by gyrase is inhibited in Salmonella enterica serovar Typhimurium during adaptation to acid stress.

Colgan AM, Quinn HJ, Kary SC, Mitchenall LA, Maxwell A, Cameron ADS, Dorman CJ.

Mol Microbiol. 2018 Mar;107(6):734-746. doi: 10.1111/mmi.13911. Epub 2018 Feb 5.

5.

Broad-scale redistribution of mRNA abundance and transcriptional machinery in response to growth rate in Salmonella enterica serovar Typhimurium.

Cameron ADS, Dillon SC, Kröger C, Beran L, Dorman CJ.

Microb Genom. 2017 Aug 4;3(10):e000127. doi: 10.1099/mgen.0.000127. eCollection 2017 Oct.

6.

The interplay between DNA topology and accessory factors in site-specific recombination in bacteria and their bacteriophages.

Dorman CJ, Bogue MM.

Sci Prog. 2016 Dec 1;99(4):420-437. doi: 10.3184/003685016X14811202974921. Review.

PMID:
28742481
7.

Control of virulence gene transcription by indirect readout in Vibrio cholerae and Salmonella enterica serovar Typhimurium.

Dorman CJ, Dorman MJ.

Environ Microbiol. 2017 Oct;19(10):3834-3845. doi: 10.1111/1462-2920.13838. Epub 2017 Jul 24. Review.

8.

DNA supercoiling is a fundamental regulatory principle in the control of bacterial gene expression.

Dorman CJ, Dorman MJ.

Biophys Rev. 2016 Sep;8(3):209-220. doi: 10.1007/s12551-016-0205-y. Epub 2016 Jun 16. Review.

9.

DNA supercoiling is a fundamental regulatory principle in the control of bacterial gene expression.

Dorman CJ, Dorman MJ.

Biophys Rev. 2016 Nov;8(Suppl 1):89-100. doi: 10.1007/s12551-016-0238-2. Epub 2016 Nov 14. Review.

10.

Bacterial pathogen gene regulation: a DNA-structure-centred view of a protein-dominated domain.

Dorman CJ, Colgan A, Dorman MJ.

Clin Sci (Lond). 2016 Jul 1;130(14):1165-77. doi: 10.1042/CS20160024. Review.

PMID:
27252403
11.

Re-engineering cellular physiology by rewiring high-level global regulatory genes.

Fitzgerald S, Dillon SC, Chao TC, Wiencko HL, Hokamp K, Cameron AD, Dorman CJ.

Sci Rep. 2015 Dec 3;5:17653. doi: 10.1038/srep17653.

12.

Agnès Fouet - departing Editor-in-Chief.

Dorman CJ.

Microbiology. 2015 Jun;161(6):1149. doi: 10.1099/mic.0.000098. No abstract available.

PMID:
26148754
13.

Integrating small molecule signalling and H-NS antagonism in Vibrio cholerae, a bacterium with two chromosomes.

Dorman CJ.

Mol Microbiol. 2015 Aug;97(4):612-5. doi: 10.1111/mmi.13063. Epub 2015 Jun 25.

14.

H-NS-like nucleoid-associated proteins, mobile genetic elements and horizontal gene transfer in bacteria.

Dorman CJ.

Plasmid. 2014 Sep;75:1-11. doi: 10.1016/j.plasmid.2014.06.004. Epub 2014 Jul 3. Review.

PMID:
24998344
15.

Bacterial regulon evolution: distinct responses and roles for the identical OmpR proteins of Salmonella Typhimurium and Escherichia coli in the acid stress response.

Quinn HJ, Cameron AD, Dorman CJ.

PLoS Genet. 2014 Mar 6;10(3):e1004215. doi: 10.1371/journal.pgen.1004215. eCollection 2014 Mar.

16.

Function of nucleoid-associated proteins in chromosome structuring and transcriptional regulation.

Dorman CJ.

J Mol Microbiol Biotechnol. 2014;24(5-6):316-31. doi: 10.1159/000368850. Epub 2015 Feb 17. Review.

PMID:
25732335
17.

Transmission of an oxygen availability signal at the Salmonella enterica serovar Typhimurium fis promoter.

Cameron AD, Kröger C, Quinn HJ, Scally IK, Daly AJ, Kary SC, Dorman CJ.

PLoS One. 2013 Dec 16;8(12):e84382. doi: 10.1371/journal.pone.0084382. eCollection 2013.

18.

A novel role for antibiotic resistance plasmids in facilitating Salmonella adaptation to non-host environments.

Paytubi S, Aznar S, Madrid C, Balsalobre C, Dillon SC, Dorman CJ, Juárez A.

Environ Microbiol. 2014 Apr;16(4):950-62. doi: 10.1111/1462-2920.12244. Epub 2013 Sep 12.

PMID:
24024872
19.

Genome architecture and global gene regulation in bacteria: making progress towards a unified model?

Dorman CJ.

Nat Rev Microbiol. 2013 May;11(5):349-55. doi: 10.1038/nrmicro3007. Epub 2013 Apr 3. Review.

PMID:
23549066
20.

Co-operative roles for DNA supercoiling and nucleoid-associated proteins in the regulation of bacterial transcription.

Dorman CJ.

Biochem Soc Trans. 2013 Apr;41(2):542-7. doi: 10.1042/BST20120222. Review.

PMID:
23514151
21.

VirB-mediated positive feedback control of the virulence gene regulatory cascade of Shigella flexneri.

Kane KA, Dorman CJ.

J Bacteriol. 2012 Oct;194(19):5264-73. doi: 10.1128/JB.00800-12. Epub 2012 Jul 20.

22.

LeuO is a global regulator of gene expression in Salmonella enterica serovar Typhimurium.

Dillon SC, Espinosa E, Hokamp K, Ussery DW, Casadesús J, Dorman CJ.

Mol Microbiol. 2012 Sep;85(6):1072-89. doi: 10.1111/j.1365-2958.2012.08162.x. Epub 2012 Jul 23.

23.

The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium.

Kröger C, Dillon SC, Cameron AD, Papenfort K, Sivasankaran SK, Hokamp K, Chao Y, Sittka A, Hébrard M, Händler K, Colgan A, Leekitcharoenphon P, Langridge GC, Lohan AJ, Loftus B, Lucchini S, Ussery DW, Dorman CJ, Thomson NR, Vogel J, Hinton JC.

Proc Natl Acad Sci U S A. 2012 May 15;109(20):E1277-86. doi: 10.1073/pnas.1201061109. Epub 2012 Apr 25.

24.

A fundamental regulatory mechanism operating through OmpR and DNA topology controls expression of Salmonella pathogenicity islands SPI-1 and SPI-2.

Cameron AD, Dorman CJ.

PLoS Genet. 2012;8(3):e1002615. doi: 10.1371/journal.pgen.1002615. Epub 2012 Mar 22.

25.

Rational design of an artificial genetic switch: Co-option of the H-NS-repressed proU operon by the VirB virulence master regulator.

Kane KA, Dorman CJ.

J Bacteriol. 2011 Nov;193(21):5950-60. doi: 10.1128/JB.05557-11. Epub 2011 Aug 26.

26.

Regulation of transcription by DNA supercoiling in Mycoplasma genitalium: global control in the smallest known self-replicating genome.

Dorman CJ.

Mol Microbiol. 2011 Jul;81(2):302-4. doi: 10.1111/j.1365-2958.2011.07718.x. Epub 2011 Jun 16.

27.

DNA supercoiling is differentially regulated by environmental factors and FIS in Escherichia coli and Salmonella enterica.

Cameron AD, Stoebel DM, Dorman CJ.

Mol Microbiol. 2011 Apr;80(1):85-101. doi: 10.1111/j.1365-2958.2011.07560.x. Epub 2011 Feb 15.

28.

Nucleoid-associated protein HU controls three regulons that coordinate virulence, response to stress and general physiology in Salmonella enterica serovar Typhimurium.

Mangan MW, Lucchini S, Ó Cróinín T, Fitzgerald S, Hinton JC, Dorman CJ.

Microbiology. 2011 Apr;157(Pt 4):1075-87. doi: 10.1099/mic.0.046359-0. Epub 2011 Jan 6.

PMID:
21212121
29.
30.

Genome-wide analysis of the H-NS and Sfh regulatory networks in Salmonella Typhimurium identifies a plasmid-encoded transcription silencing mechanism.

Dillon SC, Cameron AD, Hokamp K, Lucchini S, Hinton JC, Dorman CJ.

Mol Microbiol. 2010 Jun 1;76(5):1250-65. doi: 10.1111/j.1365-2958.2010.07173.x. Epub 2010 Apr 27.

31.

The effect of mobile element IS10 on experimental regulatory evolution in Escherichia coli.

Stoebel DM, Dorman CJ.

Mol Biol Evol. 2010 Sep;27(9):2105-12. doi: 10.1093/molbev/msq101. Epub 2010 Apr 16.

32.

Bacterial nucleoid-associated proteins, nucleoid structure and gene expression.

Dillon SC, Dorman CJ.

Nat Rev Microbiol. 2010 Mar;8(3):185-95. doi: 10.1038/nrmicro2261. Epub 2010 Feb 8. Review.

PMID:
20140026
33.

Horizontally acquired homologues of the nucleoid-associated protein H-NS: implications for gene regulation.

Dorman CJ.

Mol Microbiol. 2010 Jan;75(2):264-7. doi: 10.1111/j.1365-2958.2009.06996.x. Epub 2009 Dec 9.

34.

DNA relaxation-dependent phase biasing of the fim genetic switch in Escherichia coli depends on the interplay of H-NS, IHF and LRP.

Corcoran CP, Dorman CJ.

Mol Microbiol. 2009 Dec;74(5):1071-82. doi: 10.1111/j.1365-2958.2009.06919.x. Epub 2009 Nov 2.

35.

Compensatory evolution of gene regulation in response to stress by Escherichia coli lacking RpoS.

Stoebel DM, Hokamp K, Last MS, Dorman CJ.

PLoS Genet. 2009 Oct;5(10):e1000671. doi: 10.1371/journal.pgen.1000671. Epub 2009 Oct 2.

36.

H-NS and genomic bridge building: lessons from the human pathogen Salmonella Typhi.

Dorman CJ.

Microbiology. 2009 Jul;155(Pt 7):2114-5. doi: 10.1099/mic.0.030551-0. Epub 2009 May 14. No abstract available.

PMID:
19443540
37.

Small molecule signaling.

Jenal U, Dorman CJ.

Curr Opin Microbiol. 2009 Apr;12(2):125-8. doi: 10.1016/j.mib.2009.02.002. Epub 2009 Mar 9. No abstract available.

PMID:
19278897
38.

Regulatory integration of horizontally-transferred genes in bacteria.

Dorman CJ.

Front Biosci (Landmark Ed). 2009 Jan 1;14:4103-12. Review.

PMID:
19273337
39.

Global regulators and environmental adaptation in Gram-negative pathogens.

Dorman CJ.

Clin Microbiol Infect. 2009 Jan;15 Suppl 1:47-50. doi: 10.1111/j.1469-0691.2008.02684.x. Review.

40.

Nucleoid-associated proteins and bacterial physiology.

Dorman CJ.

Adv Appl Microbiol. 2009;67:47-64. doi: 10.1016/S0065-2164(08)01002-2. Review.

PMID:
19245936
41.

DNA bridging and antibridging: a role for bacterial nucleoid-associated proteins in regulating the expression of laterally acquired genes.

Dorman CJ, Kane KA.

FEMS Microbiol Rev. 2009 May;33(3):587-92. doi: 10.1111/j.1574-6976.2008.00155.x. Epub 2008 Dec 22. Review.

42.

Bacterial DNA topology and infectious disease.

Dorman CJ, Corcoran CP.

Nucleic Acids Res. 2009 Feb;37(3):672-8. doi: 10.1093/nar/gkn996. Epub 2008 Dec 10. Review.

43.

Anti-silencing: overcoming H-NS-mediated repression of transcription in Gram-negative enteric bacteria.

Stoebel DM, Free A, Dorman CJ.

Microbiology. 2008 Sep;154(Pt 9):2533-45. doi: 10.1099/mic.0.2008/020693-0. Review.

PMID:
18757787
44.

Autoregulated expression of the gene coding for the leucine-responsive protein, Lrp, a global regulator in Salmonella enterica serovar Typhimurium.

McFarland KA, Dorman CJ.

Microbiology. 2008 Jul;154(Pt 7):2008-16. doi: 10.1099/mic.0.2008/018358-0.

PMID:
18599829
46.
48.

DNA supercoiling and bacterial gene expression.

Dorman CJ.

Sci Prog. 2006;89(Pt 3-4):151-66. Review.

PMID:
17338437
49.
50.

Probing bacterial nucleoid structure with optical tweezers.

Dorman CJ.

Bioessays. 2007 Mar;29(3):212-6.

PMID:
17295218

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