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Items: 1 to 50 of 237

1.

Spontaneous ribosomal translocation of mRNA and tRNAs into a chimeric hybrid state.

Zhou J, Lancaster L, Donohue JP, Noller HF.

Proc Natl Acad Sci U S A. 2019 Apr 16;116(16):7813-7818. doi: 10.1073/pnas.1901310116. Epub 2019 Apr 1.

PMID:
30936299
2.

Autogenous cross-regulation of Quaking mRNA processing and translation balances Quaking functions in splicing and translation.

Fagg WS, Liu N, Fair JH, Shiue L, Katzman S, Donohue JP, Ares M Jr.

Genes Dev. 2017 Sep 15;31(18):1894-1909. doi: 10.1101/gad.302059.117. Epub 2017 Oct 11.

3.

RNA-binding protein CPEB1 remodels host and viral RNA landscapes.

Batra R, Stark TJ, Clark E, Belzile JP, Wheeler EC, Yee BA, Huang H, Gelboin-Burkhart C, Huelga SC, Aigner S, Roberts BT, Bos TJ, Sathe S, Donohue JP, Rigo F, Ares M Jr, Spector DH, Yeo GW.

Nat Struct Mol Biol. 2016 Dec;23(12):1101-1110. doi: 10.1038/nsmb.3310. Epub 2016 Oct 24.

4.

Protein-RNA Networks Regulated by Normal and ALS-Associated Mutant HNRNPA2B1 in the Nervous System.

Martinez FJ, Pratt GA, Van Nostrand EL, Batra R, Huelga SC, Kapeli K, Freese P, Chun SJ, Ling K, Gelboin-Burkhart C, Fijany L, Wang HC, Nussbacher JK, Broski SM, Kim HJ, Lardelli R, Sundararaman B, Donohue JP, Javaherian A, Lykke-Andersen J, Finkbeiner S, Bennett CF, Ares M Jr, Burge CB, Taylor JP, Rigo F, Yeo GW.

Neuron. 2016 Nov 23;92(4):780-795. doi: 10.1016/j.neuron.2016.09.050. Epub 2016 Oct 20.

5.

Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses.

Kapeli K, Pratt GA, Vu AQ, Hutt KR, Martinez FJ, Sundararaman B, Batra R, Freese P, Lambert NJ, Huelga SC, Chun SJ, Liang TY, Chang J, Donohue JP, Shiue L, Zhang J, Zhu H, Cambi F, Kasarskis E, Hoon S, Ares M Jr, Burge CB, Ravits J, Rigo F, Yeo GW.

Nat Commun. 2016 Jul 5;7:12143. doi: 10.1038/ncomms12143.

6.

The role of metabolic therapy in treating glioblastoma multiforme.

Maroon JC, Seyfried TN, Donohue JP, Bost J.

Surg Neurol Int. 2015 Apr 16;6:61. doi: 10.4103/2152-7806.155259. eCollection 2015.

7.

Initiation of translation in bacteria by a structured eukaryotic IRES RNA.

Colussi TM, Costantino DA, Zhu J, Donohue JP, Korostelev AA, Jaafar ZA, Plank TD, Noller HF, Kieft JS.

Nature. 2015 Mar 5;519(7541):110-3. doi: 10.1038/nature14219. Epub 2015 Feb 4.

8.

How the ribosome hands the A-site tRNA to the P site during EF-G-catalyzed translocation.

Zhou J, Lancaster L, Donohue JP, Noller HF.

Science. 2014 Sep 5;345(6201):1188-91. doi: 10.1126/science.1255030.

9.

Molecular mechanics of 30S subunit head rotation.

Mohan S, Donohue JP, Noller HF.

Proc Natl Acad Sci U S A. 2014 Sep 16;111(37):13325-30. doi: 10.1073/pnas.1413731111. Epub 2014 Sep 3.

10.

Competition between pre-mRNAs for the splicing machinery drives global regulation of splicing.

Munding EM, Shiue L, Katzman S, Donohue JP, Ares M Jr.

Mol Cell. 2013 Aug 8;51(3):338-48. doi: 10.1016/j.molcel.2013.06.012. Epub 2013 Jul 25.

11.

Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation.

Zhou J, Lancaster L, Donohue JP, Noller HF.

Science. 2013 Jun 28;340(6140):1236086. doi: 10.1126/science.1236086.

12.

Crystal structure of the 70S ribosome bound with the Q253P mutant form of release factor RF2.

Santos N, Zhu J, Donohue JP, Korostelev AA, Noller HF.

Structure. 2013 Jul 2;21(7):1258-63. doi: 10.1016/j.str.2013.04.028. Epub 2013 Jun 13.

13.

Quaking and PTB control overlapping splicing regulatory networks during muscle cell differentiation.

Hall MP, Nagel RJ, Fagg WS, Shiue L, Cline MS, Perriman RJ, Donohue JP, Ares M Jr.

RNA. 2013 May;19(5):627-38. doi: 10.1261/rna.038422.113. Epub 2013 Mar 22.

14.

Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs.

Lagier-Tourenne C, Polymenidou M, Hutt KR, Vu AQ, Baughn M, Huelga SC, Clutario KM, Ling SC, Liang TY, Mazur C, Wancewicz E, Kim AS, Watt A, Freier S, Hicks GG, Donohue JP, Shiue L, Bennett CF, Ravits J, Cleveland DW, Yeo GW.

Nat Neurosci. 2012 Nov;15(11):1488-97. doi: 10.1038/nn.3230. Epub 2012 Sep 30.

15.

Comparison of relative distribution of ketamine and norketamine in decomposed skeletal tissues following single and repeated exposures.

Watterson JH, Donohue JP, Betit CC.

J Anal Toxicol. 2012 Jul;36(6):429-33. doi: 10.1093/jat/bks045. Epub 2012 May 11.

PMID:
22582220
16.

Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins.

Huelga SC, Vu AQ, Arnold JD, Liang TY, Liu PP, Yan BY, Donohue JP, Shiue L, Hoon S, Brenner S, Ares M Jr, Yeo GW.

Cell Rep. 2012 Feb 23;1(2):167-78.

17.
18.

A randomized, double-blind study of AMG 108 (a fully human monoclonal antibody to IL-1R1) in patients with osteoarthritis of the knee.

Cohen SB, Proudman S, Kivitz AJ, Burch FX, Donohue JP, Burstein D, Sun YN, Banfield C, Vincent MS, Ni L, Zack DJ.

Arthritis Res Ther. 2011 Jul 29;13(4):R125. doi: 10.1186/ar3430.

19.

Long pre-mRNA depletion and RNA missplicing contribute to neuronal vulnerability from loss of TDP-43.

Polymenidou M, Lagier-Tourenne C, Hutt KR, Huelga SC, Moran J, Liang TY, Ling SC, Sun E, Wancewicz E, Mazur C, Kordasiewicz H, Sedaghat Y, Donohue JP, Shiue L, Bennett CF, Yeo GW, Cleveland DW.

Nat Neurosci. 2011 Apr;14(4):459-68. doi: 10.1038/nn.2779. Epub 2011 Feb 27.

20.

Crystal structures of complexes containing domains from two viral internal ribosome entry site (IRES) RNAs bound to the 70S ribosome.

Zhu J, Korostelev A, Costantino DA, Donohue JP, Noller HF, Kieft JS.

Proc Natl Acad Sci U S A. 2011 Feb 1;108(5):1839-44. doi: 10.1073/pnas.1018582108. Epub 2011 Jan 18.

21.

[Nerve sparing retroperitoneal lymphadenectomy (RLA)].

Albers P, Foster RS, Voges GE, Donohue JP.

Aktuelle Urol. 2010 May;41(3):201-10, 212; quiz 211. doi: 10.1055/s-0029-1233503. Epub 2010 May 18. German. No abstract available.

PMID:
20486037
22.

Aberrant alternative splicing and extracellular matrix gene expression in mouse models of myotonic dystrophy.

Du H, Cline MS, Osborne RJ, Tuttle DL, Clark TA, Donohue JP, Hall MP, Shiue L, Swanson MS, Thornton CA, Ares M Jr.

Nat Struct Mol Biol. 2010 Feb;17(2):187-93. doi: 10.1038/nsmb.1720. Epub 2010 Jan 24.

23.

Long-term outcome for patients with high volume retroperitoneal teratoma undergoing post-chemotherapy surgery.

Beck SD, Foster RS, Bihrle R, Einhorn LH, Donohue JP.

J Urol. 2009 Jun;181(6):2526-32. doi: 10.1016/j.juro.2009.01.116. Epub 2009 Apr 16.

PMID:
19371895
24.

Rehabilitation in ankylosing spondylitis.

Nghiem FT, Donohue JP.

Curr Opin Rheumatol. 2008 Mar;20(2):203-7. doi: 10.1097/BOR.0b013e3282f56868. Review.

PMID:
18349752
25.

Structural RNAs of known and unknown function identified in malaria parasites by comparative genomics and RNA analysis.

Chakrabarti K, Pearson M, Grate L, Sterne-Weiler T, Deans J, Donohue JP, Ares M Jr.

RNA. 2007 Nov;13(11):1923-39. Epub 2007 Sep 27.

26.

Is full bilateral retroperitoneal lymph node dissection always necessary for postchemotherapy residual tumor?

Beck SD, Foster RS, Bihrle R, Donohue JP, Einhorn LH.

Cancer. 2007 Sep 15;110(6):1235-40.

27.

Short-term morbidity of primary retroperitoneal lymph node dissection in a contemporary group of patients.

Beck SD, Peterson MD, Bihrle R, Donohue JP, Foster RS.

J Urol. 2007 Aug;178(2):504-6; discussion 506. Epub 2007 Jun 11.

PMID:
17561131
28.

Post chemotherapy RPLND in patients with elevated markers: current concepts and clinical outcome.

Beck SD, Foster RS, Bihrle R, Einhorn LH, Donohue JP.

Urol Clin North Am. 2007 May;34(2):219-25; abstract ix-x. Review.

PMID:
17484926
30.

Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay.

Ni JZ, Grate L, Donohue JP, Preston C, Nobida N, O'Brien G, Shiue L, Clark TA, Blume JE, Ares M Jr.

Genes Dev. 2007 Mar 15;21(6):708-18.

31.

Retroperitoneal lymph node dissection in testicular cancer.

Jacobsen NE, Foster RS, Donohue JP.

Surg Oncol Clin N Am. 2007 Jan;16(1):199-220. Review.

PMID:
17336244
32.
33.

Pathologic findings and therapeutic outcome of desperation post-chemotherapy retroperitoneal lymph node dissection in advanced germ cell cancer.

Beck SD, Foster RS, Bihrle R, Einhorn LH, Donohue JP.

Urol Oncol. 2005 Nov-Dec;23(6):423-30.

PMID:
16301122
34.

Does the histology of nodal metastasis predict systemic relapse after retroperitoneal lymph node dissection in pathological stage B1 germ cell tumors?

Beck SD, Foster RS, Bihrle R, Cheng L, Donohue JP.

J Urol. 2005 Oct;174(4 Pt 1):1287-90; discussion 1290.

PMID:
16145394
35.

Outcome analysis for patients with elevated serum tumor markers at postchemotherapy retroperitoneal lymph node dissection.

Beck SD, Foster RS, Bihrle R, Einhorn LH, Donohue JP.

J Clin Oncol. 2005 Sep 1;23(25):6149-56.

PMID:
16135481
36.

Impact of the number of positive lymph nodes on disease-free survival in patients with pathological stage B1 nonseminomatous germ cell tumor.

Beck SD, Foster RS, Bihrle R, Cheng L, Ulbright TM, Donohue JP.

J Urol. 2005 Jul;174(1):143-5.

PMID:
15947600
37.

Complications of post-chemotherapy retroperitoneal lymph node dissection for testis cancer.

Mosharafa AA, Foster RS, Koch MO, Bihrle R, Donohue JP.

J Urol. 2004 May;171(5):1839-41.

PMID:
15076289
38.

Histology in mixed germ cell tumors. Is there a favorite pairing?

Mosharafa AA, Foster RS, Leibovich BC, Ulbright TM, Bihrle R, Einhorn LH, Donohue JP.

J Urol. 2004 Apr;171(4):1471-3.

PMID:
15017200
39.

Does retroperitoneal lymph node dissection have a curative role for patients with sex cord-stromal testicular tumors?

Mosharafa AA, Foster RS, Bihrle R, Koch MO, Ulbright TM, Einhorn LH, Donohue JP.

Cancer. 2003 Aug 15;98(4):753-7.

41.

Is post-chemotherapy resection of seminomatous elements associated with higher acute morbidity?

Mosharafa AA, Foster RS, Leibovich BC, Bihrle R, Johnson C, Donohue JP.

J Urol. 2003 Jun;169(6):2126-8.

PMID:
12771733
42.

The role of retroperitoneal surgery in testis cancer.

Leisinger HJ, Donohue JP.

Crit Rev Oncol Hematol. 2002 Oct;44(1):71-80. Review.

PMID:
12399000
43.

Teratoma in the orchiectomy specimen and volume of metastasis are predictors of retroperitoneal teratoma in post-chemotherapy nonseminomatous testis cancer.

Beck SD, Foster RS, Bihrle R, Ulbright T, Koch MO, Wahle GR, Einhorn LH, Donohue JP.

J Urol. 2002 Oct;168(4 Pt 1):1402-4.

PMID:
12352402
44.

Aortic replacement during post-chemotherapy retroperitoneal lymph node dissection.

Beck SD, Foster RS, Bihrle R, Koch MO, Wahle GR, Donohue JP.

J Urol. 2001 May;165(5):1517-20.

PMID:
11342909
45.

Germ cell tumor associated primitive neuroectodermal tumors.

Ganjoo KN, Foster RS, Michael H, Donohue JP, Einhorn LH.

J Urol. 2001 May;165(5):1514-6.

PMID:
11342908
46.

Validation of a prediction model and its predictors for the histology of residual masses in nonseminomatous testicular cancer.

Vergouwe Y, Steyerberg EW, Foster RS, Habbema JD, Donohue JP.

J Urol. 2001 Jan;165(1):84-8; discussion 88.

PMID:
11125370
47.

Cutaneous inflammatory disorder in integrin alphaE (CD103)-deficient mice.

Schön MP, Schön M, Warren HB, Donohue JP, Parker CM.

J Immunol. 2000 Dec 1;165(11):6583-9.

48.
49.

Retroperitoneal lymph node dissection for the management of clinical stage I nonseminoma.

Foster RS, Donohue JP.

J Urol. 2000 Jun;163(6):1788-92. Review.

PMID:
10799183
50.

Risk of systemic metastases in clinical stage I nonseminoma germ cell testis tumor managed by retroperitoneal lymph node dissection.

Hermans BP, Sweeney CJ, Foster RS, Einhorn LE, Donohue JP.

J Urol. 2000 Jun;163(6):1721-4.

PMID:
10799168

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