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Gene expression profiling of whole blood: A comparative assessment of RNA-stabilizing collection methods.

Donohue DE, Gautam A, Miller SA, Srinivasan S, Abu-Amara D, Campbell R, Marmar CR, Hammamieh R, Jett M.

PLoS One. 2019 Oct 10;14(10):e0223065. doi: 10.1371/journal.pone.0223065. eCollection 2019.


Multi-omic biomarker identification and validation for diagnosing warzone-related post-traumatic stress disorder.

Dean KR, Hammamieh R, Mellon SH, Abu-Amara D, Flory JD, Guffanti G, Wang K, Daigle BJ Jr, Gautam A, Lee I, Yang R, Almli LM, Bersani FS, Chakraborty N, Donohue D, Kerley K, Kim TK, Laska E, Young Lee M, Lindqvist D, Lori A, Lu L, Misganaw B, Muhie S, Newman J, Price ND, Qin S, Reus VI, Siegel C, Somvanshi PR, Thakur GS, Zhou Y; PTSD Systems Biology Consortium, Hood L, Ressler KJ, Wolkowitz OM, Yehuda R, Jett M, Doyle FJ 3rd, Marmar C.

Mol Psychiatry. 2019 Sep 10. doi: 10.1038/s41380-019-0496-z. [Epub ahead of print]


Metabolomic analysis of male combat veterans with post traumatic stress disorder.

Mellon SH, Bersani FS, Lindqvist D, Hammamieh R, Donohue D, Dean K, Jett M, Yehuda R, Flory J, Reus VI, Bierer LM, Makotkine I, Abu Amara D, Henn Haase C, Coy M, Doyle FJ 3rd, Marmar C, Wolkowitz OM.

PLoS One. 2019 Mar 18;14(3):e0213839. doi: 10.1371/journal.pone.0213839. eCollection 2019.


Metabolomic analyses reveal lipid abnormalities and hepatic dysfunction in non-human primate model for Yersinia pestis.

Gautam A, Muhie S, Chakraborty N, Hoke A, Donohue D, Miller SA, Hammamieh R, Jett M.

Metabolomics. 2018 Dec 29;15(1):2. doi: 10.1007/s11306-018-1457-2.


Long Segment Blocking Screws Increase the Stability of Retrograde Nail Fixation in Geriatric Supracondylar Femur Fractures: Eliminating the "Bell-Clapper Effect".

Auston D, Donohue D, Stoops K, Cox J, Diaz M, Santoni B, Mir H.

J Orthop Trauma. 2018 Nov;32(11):559-564. doi: 10.1097/BOT.0000000000001284.


Opportunistic CT Screening for Osteoporosis in Patients With Pelvic and Acetabular Trauma: Technique and Potential Clinical Impact.

Donohue D, Decker S, Ford J, Foley R, Dunbar K, Kumm T, Achors K, Mir H.

J Orthop Trauma. 2018 Aug;32(8):408-413. doi: 10.1097/BOT.0000000000001231.


Biomechanical Comparison of 3 Inferiorly Directed Versus 3 Superiorly Directed Locking Screws on Stability in a 3-Part Proximal Humerus Fracture Model.

Donohue DM, Santoni BG, Stoops TK, Tanner G, Diaz MA, Mighell M.

J Orthop Trauma. 2018 Jun;32(6):306-312. doi: 10.1097/BOT.0000000000001112.


Gene-metabolite profile integration to understand the cause of spaceflight induced immunodeficiency.

Chakraborty N, Cheema A, Gautam A, Donohue D, Hoke A, Conley C, Jett M, Hammamieh R.

NPJ Microgravity. 2018 Jan 29;4:4. doi: 10.1038/s41526-017-0038-4. eCollection 2018.


Gene expression associated with suicide attempts in US veterans.

Flory JD, Donohue D, Muhie S, Yang R, Miller SA, Hammamieh R, Ryberg K, Yehuda R.

Transl Psychiatry. 2017 Sep 5;7(9):e1226. doi: 10.1038/tp.2017.179.


Whole-genome DNA methylation status associated with clinical PTSD measures of OIF/OEF veterans.

Hammamieh R, Chakraborty N, Gautam A, Muhie S, Yang R, Donohue D, Kumar R, Daigle BJ Jr, Zhang Y, Amara DA, Miller SA, Srinivasan S, Flory J, Yehuda R, Petzold L, Wolkowitz OM, Mellon SH, Hood L, Doyle FJ 3rd, Marmar C, Jett M.

Transl Psychiatry. 2017 Jul 11;7(7):e1169. doi: 10.1038/tp.2017.129.


The attitudes of typically developing adolescents towards their sibling with autism spectrum disorder.

Van der Merwe C, Bornman J, Donohue D, Harty M.

S Afr J Commun Disord. 2017 Apr 26;64(1):e1-e7. doi: 10.4102/sajcd.v64i1.184.


Institutional and Seasonal Variations in the Incidence and Causative Organisms for Posttraumatic Infection following Open Fractures.

Sagi HC, Donohue D, Cooper S, Barei DP, Siebler J, Archdeacon MT, Sciadini M, Romeo M, Bergin PF, Higgins T, Mir H; Center for Bone and Joint Infection.

J Orthop Trauma. 2017 Feb;31(2):78-84. doi: 10.1097/BOT.0000000000000730.


Lectin-Glycan Interaction Network-Based Identification of Host Receptors of Microbial Pathogenic Adhesins.

Ielasi FS, Alioscha-Perez M, Donohue D, Claes S, Sahli H, Schols D, Willaert RG.

MBio. 2016 Jul 12;7(4). pii: e00584-16. doi: 10.1128/mBio.00584-16.


Ketorolac Administered in the Recovery Room for Acute Pain Management Does Not Affect Healing Rates of Femoral and Tibial Fractures.

Donohue D, Sanders D, Serrano-Riera R, Jordan C, Gaskins R, Sanders R, Sagi HC.

J Orthop Trauma. 2016 Sep;30(9):479-82. doi: 10.1097/BOT.0000000000000620.


Erythrokinetics: quantitative measurements of red cell production and destruction in normal subjects and patients with anemia.

Giblett ER, Coleman DH, Pirzio-Biroli G, Donohue DM, Motulsky AG, Finch CA.

Blood. 2016 Mar 17;127(11):1375. doi: 10.1182/blood-2016-01-692863.


Erratum to: The somatic autosomal mutation matrix in cancer genomes.

Temiz NA, Donohue DE, Bacolla A, Vasquez KM, Cooper DN, Mudunuri U, Ivanic J, Cer RZ, Yi M, Stephens RM, Collins JR, Luke BT.

Hum Genet. 2015 Aug;134(8):865-7. doi: 10.1007/s00439-015-1576-z. No abstract available.


The somatic autosomal mutation matrix in cancer genomes.

Temiz NA, Donohue DE, Bacolla A, Vasquez KM, Cooper DN, Mudunuri U, Ivanic J, Cer RZ, Yi M, Stephens RM, Collins JR, Luke BT.

Hum Genet. 2015 Aug;134(8):851-64. doi: 10.1007/s00439-015-1566-1. Epub 2015 May 23. Erratum in: Hum Genet. 2015 Aug;134(8):865-7.


Acute and chronic plasma metabolomic and liver transcriptomic stress effects in a mouse model with features of post-traumatic stress disorder.

Gautam A, D'Arpa P, Donohue DE, Muhie S, Chakraborty N, Luke BT, Grapov D, Carroll EE, Meyerhoff JL, Hammamieh R, Jett M.

PLoS One. 2015 Jan 28;10(1):e0117092. doi: 10.1371/journal.pone.0117092. eCollection 2015.


Household size is associated with unintelligible speech in children who have intellectual disabilities: A South African study.

Donohue DK, Bornman J, Granlund M.

Dev Neurorehabil. 2015;18(6):402-6. doi: 10.3109/17518423.2014.890256. Epub 2014 Mar 20.


Facile and efficient Lewis acid catalyzed synthesis of an asymmetric tetrazine useful for bio-orthogonal click chemistry applications.

Alge DL, Donohue DF, Anseth KS.

Tetrahedron Lett. 2013 Oct 9;54(41). doi: 10.1016/j.tetlet.2013.08.010.


Guanine holes are prominent targets for mutation in cancer and inherited disease.

Bacolla A, Temiz NA, Yi M, Ivanic J, Cer RZ, Donohue DE, Ball EV, Mudunuri US, Wang G, Jain A, Volfovsky N, Luke BT, Stephens RM, Cooper DN, Collins JR, Vasquez KM.

PLoS Genet. 2013;9(9):e1003816. doi: 10.1371/journal.pgen.1003816. Epub 2013 Sep 26.


Children's voices--Differentiating a child perspective from a child's perspective.

Nilsson S, Björkman B, Almqvist AL, Almqvist L, Björk-Willén P, Donohue D, Enskär K, Granlund M, Huus K, Hvit S.

Dev Neurorehabil. 2015 Jun;18(3):162-8. doi: 10.3109/17518423.2013.801529. Epub 2013 Aug 7. Review.


Synthetically tractable click hydrogels for three-dimensional cell culture formed using tetrazine-norbornene chemistry.

Alge DL, Azagarsamy MA, Donohue DF, Anseth KS.

Biomacromolecules. 2013 Apr 8;14(4):949-53. doi: 10.1021/bm4000508. Epub 2013 Mar 8.


APOBEC3B is an enzymatic source of mutation in breast cancer.

Burns MB, Lackey L, Carpenter MA, Rathore A, Land AM, Leonard B, Refsland EW, Kotandeniya D, Tretyakova N, Nikas JB, Yee D, Temiz NA, Donohue DE, McDougle RM, Brown WL, Law EK, Harris RS.

Nature. 2013 Feb 21;494(7437):366-70. doi: 10.1038/nature11881. Epub 2013 Feb 6. Erratum in: Nature. 2013 Oct 24;502(7472):580.


Non-B DB v2.0: a database of predicted non-B DNA-forming motifs and its associated tools.

Cer RZ, Donohue DE, Mudunuri US, Temiz NA, Loss MA, Starner NJ, Halusa GN, Volfovsky N, Yi M, Luke BT, Bacolla A, Collins JR, Stephens RM.

Nucleic Acids Res. 2013 Jan;41(Database issue):D94-D100. doi: 10.1093/nar/gks955. Epub 2012 Nov 3.


SDF and GABA interact to regulate axophilic migration of GnRH neurons.

Casoni F, Hutchins BI, Donohue D, Fornaro M, Condie BG, Wray S.

J Cell Sci. 2012 Nov 1;125(Pt 21):5015-25. doi: 10.1242/jcs.101675. Epub 2012 Sep 12.


The role of methylation in the intrinsic dynamics of B- and Z-DNA.

Temiz NA, Donohue DE, Bacolla A, Luke BT, Collins JR.

PLoS One. 2012;7(4):e35558. doi: 10.1371/journal.pone.0035558. Epub 2012 Apr 17.


Searching for non-B DNA-forming motifs using nBMST (non-B DNA motif search tool).

Cer RZ, Bruce KH, Donohue DE, Temiz NA, Mudunuri US, Yi M, Volfovsky N, Bacolla A, Luke BT, Collins JR, Stephens RM.

Curr Protoc Hum Genet. 2012 Apr;Chapter 18:Unit 18.7.1-22. doi: 10.1002/0471142905.hg1807s73.


Production and characterization of plutonium dioxide particles as a quality control material for safeguards purposes.

Shinonaga T, Donohue D, Aigner H, Bürger S, Klose D, Kärkelä T, Zilliacus R, Auvinen A, Marie O, Pointurier F.

Anal Chem. 2012 Mar 20;84(6):2638-46. doi: 10.1021/ac202502z. Epub 2012 Feb 28.


Dysregulation of Semaphorin7A/β1-integrin signaling leads to defective GnRH-1 cell migration, abnormal gonadal development and altered fertility.

Messina A, Ferraris N, Wray S, Cagnoni G, Donohue DE, Casoni F, Kramer PR, Derijck AA, Adolfs Y, Fasolo A, Pasterkamp RJ, Giacobini P.

Hum Mol Genet. 2011 Dec 15;20(24):4759-74. doi: 10.1093/hmg/ddr403. Epub 2011 Sep 8.


The N-terminal part of Als1 protein from Candida albicans specifically binds fucose-containing glycans.

Donohue DS, Ielasi FS, Goossens KV, Willaert RG.

Mol Microbiol. 2011 Jun;80(6):1667-79. doi: 10.1111/j.1365-2958.2011.07676.x. Epub 2011 May 17.


Teacher-student relationship climate and school outcomes: implications for educational policy initiatives.

Barile JP, Donohue DK, Anthony ER, Baker AM, Weaver SR, Henrich CC.

J Youth Adolesc. 2012 Mar;41(3):256-67. doi: 10.1007/s10964-011-9652-8. Epub 2011 Mar 15.


Automated reconstruction of neuronal morphology: an overview.

Donohue DE, Ascoli GA.

Brain Res Rev. 2011 Jun 24;67(1-2):94-102. doi: 10.1016/j.brainresrev.2010.11.003. Epub 2010 Nov 27. Review.


The N-terminal domain of the Flo1 flocculation protein from Saccharomyces cerevisiae binds specifically to mannose carbohydrates.

Goossens KV, Stassen C, Stals I, Donohue DS, Devreese B, De Greve H, Willaert RG.

Eukaryot Cell. 2011 Jan;10(1):110-7. doi: 10.1128/EC.00185-10. Epub 2010 Nov 12.


Self-concept development and measurement in children with mild intellectual disabilities.

Donohue D, Wise JC, Romski M, Henrich CC, Sevcik RA.

Dev Neurorehabil. 2010;13(5):322-34. doi: 10.3109/17518423.2010.496765.


Treating obstructive sleep apnea with CPAP.

Donohue DA.

Nurs Manage. 2010 Jul;41(7):49-50. doi: 10.1097/01.NUMA.0000384035.63293.12. No abstract available.


Use of an active-fixation coronary sinus lead to implant a biventricular pacemaker via the femoral vein.

Shandling A, Donohue D, Tobias S, Wu I, Brar R.

Tex Heart Inst J. 2010;37(1):92-4.


Configuration of an alpha-gamma coincidence spectrometer for utilization of safeguards measurements.

Breitenecker K, Donohue D, Eisenwagner H, Maddison AP, Siegmund H.

Appl Radiat Isot. 2009 Dec;67(12):2088-91. doi: 10.1016/j.apradiso.2009.04.022. Epub 2009 May 18.


Application of a model for the development of a mental health service delivery collaboration between police and the health service.

Laing R, Halsey R, Donohue D, Newman C, Cashin A.

Issues Ment Health Nurs. 2009 May;30(5):337-41. doi: 10.1080/01612840902754644.


Not just a sunburn: initial presentation may disguise mustard attack.

Donohue D.

JEMS. 2008 Nov;33(11):12-3. No abstract available.


NeuroMorpho.Org implementation of digital neuroscience: dense coverage and integration with the NIF.

Halavi M, Polavaram S, Donohue DE, Hamilton G, Hoyt J, Smith KP, Ascoli GA.

Neuroinformatics. 2008 Sep;6(3):241-52. doi: 10.1007/s12021-008-9030-1. Epub 2008 Oct 24.


The neuroscience information framework: a data and knowledge environment for neuroscience.

Gardner D, Akil H, Ascoli GA, Bowden DM, Bug W, Donohue DE, Goldberg DH, Grafstein B, Grethe JS, Gupta A, Halavi M, Kennedy DN, Marenco L, Martone ME, Miller PL, Müller HM, Robert A, Shepherd GM, Sternberg PW, Van Essen DC, Williams RW.

Neuroinformatics. 2008 Sep;6(3):149-60. doi: 10.1007/s12021-008-9024-z. Epub 2008 Oct 23.


A comparative computer simulation of dendritic morphology.

Donohue DE, Ascoli GA.

PLoS Comput Biol. 2008 Jun 6;4(5):e1000089. doi: 10.1371/journal.pcbi.1000089.


Medical triage for WMD incidents incidents: an adaptation of daily triage.

Donohue D.

JEMS. 2008 May;33(5):60-70. doi: 10.1016/S0197-2510(08)70191-8.


The prevalence of Brugada ECG in adult patients in a large university hospital in the western United States.

Donohue D, Tehrani F, Jamehdor R, Lam C, Movahed MR.

Am Heart Hosp J. 2008 Winter;6(1):48-50.


NeuroMorpho.Org: a central resource for neuronal morphologies.

Ascoli GA, Donohue DE, Halavi M.

J Neurosci. 2007 Aug 29;27(35):9247-51. No abstract available.


A guide to hazmat response.

Donohue D.

Emerg Med Serv. 2007 Apr;36(4):88-90.


Hazardous-materials recognition.

Donohue D.

Emerg Med Serv. 2007 Feb;36(2):62-6. No abstract available.


Safety of probiotics.

Donohue DC.

Asia Pac J Clin Nutr. 2006;15(4):563-9. Review.

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