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Items: 1 to 50 of 77

1.

Bridging large-scale neuronal recordings and large-scale network models using dimensionality reduction.

Williamson RC, Doiron B, Smith MA, Yu BM.

Curr Opin Neurobiol. 2019 Jan 21;55:40-47. doi: 10.1016/j.conb.2018.12.009. [Epub ahead of print] Review.

PMID:
30677702
2.

Circuit Models of Low-Dimensional Shared Variability in Cortical Networks.

Huang C, Ruff DA, Pyle R, Rosenbaum R, Cohen MR, Doiron B.

Neuron. 2019 Jan 16;101(2):337-348.e4. doi: 10.1016/j.neuron.2018.11.034. Epub 2018 Dec 20.

PMID:
30581012
3.

Training and Spontaneous Reinforcement of Neuronal Assemblies by Spike Timing Plasticity.

Ocker GK, Doiron B.

Cereb Cortex. 2019 Mar 1;29(3):937-951. doi: 10.1093/cercor/bhy001.

PMID:
29415191
4.

A novel experimental model for human mixed acinar-ductal pancreatic cancer.

Doiron B, DeFronzo RA.

Carcinogenesis. 2018 Feb 9;39(2):180-190. doi: 10.1093/carcin/bgx119.

5.

From the statistics of connectivity to the statistics of spike times in neuronal networks.

Ocker GK, Hu Y, Buice MA, Doiron B, Josić K, Rosenbaum R, Shea-Brown E.

Curr Opin Neurobiol. 2017 Oct;46:109-119. doi: 10.1016/j.conb.2017.07.011. Epub 2017 Aug 30. Review.

6.

Titanium Oxynitride Thin Films with Tunable Double Epsilon-Near-Zero Behavior for Nanophotonic Applications.

Braic L, Vasilantonakis N, Mihai A, Villar Garcia IJ, Fearn S, Zou B, Alford NM, Doiron B, Oulton RF, Maier SA, Zayats AV, Petrov PK.

ACS Appl Mater Interfaces. 2017 Sep 6;9(35):29857-29862. doi: 10.1021/acsami.7b07660. Epub 2017 Aug 24.

7.

Population activity structure of excitatory and inhibitory neurons.

Bittner SR, Williamson RC, Snyder AC, Litwin-Kumar A, Doiron B, Chase SM, Smith MA, Yu BM.

PLoS One. 2017 Aug 17;12(8):e0181773. doi: 10.1371/journal.pone.0181773. eCollection 2017.

8.

Once upon a (slow) time in the land of recurrent neuronal networks….

Huang C, Doiron B.

Curr Opin Neurobiol. 2017 Oct;46:31-38. doi: 10.1016/j.conb.2017.07.003. Epub 2017 Jul 27. Review.

PMID:
28756341
9.

Attentional modulation of neuronal variability in circuit models of cortex.

Kanashiro T, Ocker GK, Cohen MR, Doiron B.

Elife. 2017 Jun 7;6. pii: e23978. doi: 10.7554/eLife.23978.

10.

Noise-enhanced coding in phasic neuron spike trains.

Ly C, Doiron B.

PLoS One. 2017 May 4;12(5):e0176963. doi: 10.1371/journal.pone.0176963. eCollection 2017.

11.

Integrating Hebbian and homeostatic plasticity: the current state of the field and future research directions.

Keck T, Toyoizumi T, Chen L, Doiron B, Feldman DE, Fox K, Gerstner W, Haydon PG, Hübener M, Lee HK, Lisman JE, Rose T, Sengpiel F, Stellwagen D, Stryker MP, Turrigiano GG, van Rossum MC.

Philos Trans R Soc Lond B Biol Sci. 2017 Mar 5;372(1715). pii: 20160158. doi: 10.1098/rstb.2016.0158.

12.

Scaling Properties of Dimensionality Reduction for Neural Populations and Network Models.

Williamson RC, Cowley BR, Litwin-Kumar A, Doiron B, Kohn A, Smith MA, Yu BM.

PLoS Comput Biol. 2016 Dec 7;12(12):e1005141. doi: 10.1371/journal.pcbi.1005141. eCollection 2016 Dec.

13.

The spatial structure of correlated neuronal variability.

Rosenbaum R, Smith MA, Kohn A, Rubin JE, Doiron B.

Nat Neurosci. 2017 Jan;20(1):107-114. doi: 10.1038/nn.4433. Epub 2016 Oct 31.

14.

The mechanics of state-dependent neural correlations.

Doiron B, Litwin-Kumar A, Rosenbaum R, Ocker GK, Josić K.

Nat Neurosci. 2016 Mar;19(3):383-93. doi: 10.1038/nn.4242. Review.

15.

Inhibitory stabilization and visual coding in cortical circuits with multiple interneuron subtypes.

Litwin-Kumar A, Rosenbaum R, Doiron B.

J Neurophysiol. 2016 Mar;115(3):1399-409. doi: 10.1152/jn.00732.2015. Epub 2016 Jan 6.

16.
17.

Self-Organization of Microcircuits in Networks of Spiking Neurons with Plastic Synapses.

Ocker GK, Litwin-Kumar A, Doiron B.

PLoS Comput Biol. 2015 Aug 20;11(8):e1004458. doi: 10.1371/journal.pcbi.1004458. eCollection 2015 Aug.

18.

Formation and maintenance of neuronal assemblies through synaptic plasticity.

Litwin-Kumar A, Doiron B.

Nat Commun. 2014 Nov 14;5:5319. doi: 10.1038/ncomms6319.

PMID:
25395015
19.

Balanced neural architecture and the idling brain.

Doiron B, Litwin-Kumar A.

Front Comput Neurosci. 2014 May 27;8:56. doi: 10.3389/fncom.2014.00056. eCollection 2014.

20.

Kv7 channels regulate pairwise spiking covariability in health and disease.

Ocker GK, Doiron B.

J Neurophysiol. 2014 Jul 15;112(2):340-52. doi: 10.1152/jn.00084.2014. Epub 2014 Apr 30.

21.

Optimizing working memory with heterogeneity of recurrent cortical excitation.

Kilpatrick ZP, Ermentrout B, Doiron B.

J Neurosci. 2013 Nov 27;33(48):18999-9011. doi: 10.1523/JNEUROSCI.1641-13.2013.

22.

Axonal and synaptic failure suppress the transfer of firing rate oscillations, synchrony and information during high frequency deep brain stimulation.

Rosenbaum R, Zimnik A, Zheng F, Turner RS, Alzheimer C, Doiron B, Rubin JE.

Neurobiol Dis. 2014 Feb;62:86-99. doi: 10.1016/j.nbd.2013.09.006. Epub 2013 Sep 16.

23.

Short-term synaptic depression and stochastic vesicle dynamics reduce and shape neuronal correlations.

Rosenbaum R, Rubin JE, Doiron B.

J Neurophysiol. 2013 Jan;109(2):475-84. doi: 10.1152/jn.00733.2012. Epub 2012 Oct 31.

24.

The spatial structure of stimuli shapes the timescale of correlations in population spiking activity.

Litwin-Kumar A, Chacron MJ, Doiron B.

PLoS Comput Biol. 2012;8(9):e1002667. doi: 10.1371/journal.pcbi.1002667. Epub 2012 Sep 13.

25.

Slow dynamics and high variability in balanced cortical networks with clustered connections.

Litwin-Kumar A, Doiron B.

Nat Neurosci. 2012 Nov;15(11):1498-505. doi: 10.1038/nn.3220. Epub 2012 Sep 23.

26.

Short term synaptic depression imposes a frequency dependent filter on synaptic information transfer.

Rosenbaum R, Rubin J, Doiron B.

PLoS Comput Biol. 2012;8(6):e1002557. doi: 10.1371/journal.pcbi.1002557. Epub 2012 Jun 21.

27.

Correlated neural variability in persistent state networks.

Polk A, Litwin-Kumar A, Doiron B.

Proc Natl Acad Sci U S A. 2012 Apr 17;109(16):6295-300. doi: 10.1073/pnas.1121274109. Epub 2012 Apr 2.

28.

Cellular and circuit mechanisms maintain low spike co-variability and enhance population coding in somatosensory cortex.

Ly C, Middleton JW, Doiron B.

Front Comput Neurosci. 2012 Mar 8;6:7. doi: 10.3389/fncom.2012.00007. eCollection 2012.

29.

Diverse levels of an inwardly rectifying potassium conductance generate heterogeneous neuronal behavior in a population of dorsal cochlear nucleus pyramidal neurons.

Leao RM, Li S, Doiron B, Tzounopoulos T.

J Neurophysiol. 2012 Jun;107(11):3008-19. doi: 10.1152/jn.00660.2011. Epub 2012 Feb 29.

30.

Correlation transfer from basal ganglia to thalamus in Parkinson's disease.

Reitsma P, Doiron B, Rubin J.

Front Comput Neurosci. 2011 Dec 13;5:58. doi: 10.3389/fncom.2011.00058. eCollection 2011.

31.

Neural correlation is stimulus modulated by feedforward inhibitory circuitry.

Middleton JW, Omar C, Doiron B, Simons DJ.

J Neurosci. 2012 Jan 11;32(2):506-18. doi: 10.1523/JNEUROSCI.3474-11.2012.

32.

Lentivirus shRNA Grb10 targeting the pancreas induces apoptosis and improved glucose tolerance due to decreased plasma glucagon levels.

Doiron B, Hu W, Norton L, DeFronzo RA.

Diabetologia. 2012 Mar;55(3):719-28. doi: 10.1007/s00125-011-2414-z. Epub 2012 Jan 7.

PMID:
22222503
33.

Balanced synaptic input shapes the correlation between neural spike trains.

Litwin-Kumar A, Oswald AM, Urban NN, Doiron B.

PLoS Comput Biol. 2011 Dec;7(12):e1002305. doi: 10.1371/journal.pcbi.1002305. Epub 2011 Dec 22.

34.

Combined LTP and LTD of modulatory inputs controls neuronal processing of primary sensory inputs.

Doiron B, Zhao Y, Tzounopoulos T.

J Neurosci. 2011 Jul 20;31(29):10579-92. doi: 10.1523/JNEUROSCI.1592-11.2011.

35.

Timescale-dependent shaping of correlation by olfactory bulb lateral inhibition.

Giridhar S, Doiron B, Urban NN.

Proc Natl Acad Sci U S A. 2011 Apr 5;108(14):5843-8. doi: 10.1073/pnas.1015165108. Epub 2011 Mar 21.

36.

Balancing organization and flexibility in foraging dynamics.

Tabone M, Ermentrout B, Doiron B.

J Theor Biol. 2010 Oct 7;266(3):391-400. doi: 10.1016/j.jtbi.2010.07.004. Epub 2010 Jul 11.

PMID:
20627107
37.

Slope-based stochastic resonance: how noise enables phasic neurons to encode slow signals.

Gai Y, Doiron B, Rinzel J.

PLoS Comput Biol. 2010 Jun 24;6(6):e1000825. doi: 10.1371/journal.pcbi.1000825.

38.

Noise-gated encoding of slow inputs by auditory brain stem neurons with a low-threshold K+ current.

Gai Y, Doiron B, Kotak V, Rinzel J.

J Neurophysiol. 2009 Dec;102(6):3447-60. doi: 10.1152/jn.00538.2009. Epub 2009 Oct 7.

39.

Spatial profile and differential recruitment of GABAB modulate oscillatory activity in auditory cortex.

Oswald AM, Doiron B, Rinzel J, Reyes AD.

J Neurosci. 2009 Aug 19;29(33):10321-34. doi: 10.1523/JNEUROSCI.1703-09.2009.

40.

Stimulus-dependent correlations and population codes.

Josić K, Shea-Brown E, Doiron B, de la Rocha J.

Neural Comput. 2009 Oct;21(10):2774-804. doi: 10.1162/neco.2009.10-08-879.

PMID:
19635014
41.

Divisive gain modulation with dynamic stimuli in integrate-and-fire neurons.

Ly C, Doiron B.

PLoS Comput Biol. 2009 Apr;5(4):e1000365. doi: 10.1371/journal.pcbi.1000365. Epub 2009 Apr 24. Erratum in: PLoS Comput Biol. 2009 Jun;5(6). doi: 10.1371/annotation/9c4474f6-e58e-41ea-af4b-090bbb86f474.

42.

Feedback-induced gain control in stochastic spiking networks.

Sutherland C, Doiron B, Longtin A.

Biol Cybern. 2009 Jun;100(6):475-89. doi: 10.1007/s00422-009-0298-5. Epub 2009 Mar 4.

PMID:
19259695
43.

Regulation of somatic firing dynamics by backpropagating dendritic spikes.

Mehaffey WH, Fernandez FR, Doiron B, Turner RW.

J Physiol Paris. 2008 Jul-Nov;102(4-6):181-94. doi: 10.1016/j.jphysparis.2008.10.011. Epub 2008 Oct 17.

PMID:
18984047
44.

Correlation and synchrony transfer in integrate-and-fire neurons: basic properties and consequences for coding.

Shea-Brown E, Josić K, de la Rocha J, Doiron B.

Phys Rev Lett. 2008 Mar 14;100(10):108102. Epub 2008 Mar 11.

PMID:
18352234
45.
46.

Gamma oscillations of spiking neural populations enhance signal discrimination.

Masuda N, Doiron B.

PLoS Comput Biol. 2007 Nov;3(11):e236. Epub 2007 Oct 17.

47.

Correlation between neural spike trains increases with firing rate.

de la Rocha J, Doiron B, Shea-Brown E, Josić K, Reyes A.

Nature. 2007 Aug 16;448(7155):802-6.

PMID:
17700699
48.

Interval coding. II. Dendrite-dependent mechanisms.

Doiron B, Oswald AM, Maler L.

J Neurophysiol. 2007 Apr;97(4):2744-57.

49.

Interval coding. I. Burst interspike intervals as indicators of stimulus intensity.

Oswald AM, Doiron B, Maler L.

J Neurophysiol. 2007 Apr;97(4):2731-43.

50.

Towards blueprints for network architecture, biophysical dynamics and signal transduction.

Coombes S, Doiron B, Josić K, Shea-Brown E.

Philos Trans A Math Phys Eng Sci. 2006 Dec 15;364(1849):3301-18. Review.

PMID:
17090461

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