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Items: 1 to 50 of 70

1.

Draft Genome Sequence of Phenol-Degrading Variovorax boronicumulans Strain HAB-30.

Aziz FAA, Suzuki K, Moriuchi R, Dohra H, Tashiro Y, Futamata H.

Microbiol Resour Announc. 2020 Feb 13;9(7). pii: e01478-19. doi: 10.1128/MRA.01478-19.

2.

Chryseotalea sanaruensis gen. nov., sp., nov., a Member of the Family Cytophagaceae, Isolated from a Brackish Lake in Hamamatsu Japan.

Maejima Y, Iino T, Muraguchi Y, Fukuda K, Ohkuma M, Suzuki T, Moriuchi R, Dohra H, Kimbara K, Shintani M.

Curr Microbiol. 2020 Feb;77(2):306-312. doi: 10.1007/s00284-019-01823-4. Epub 2019 Dec 2.

PMID:
31792570
3.

Floral organ- and temperature-dependent regulation of anthocyanin biosynthesis in Cymbidium hybrid flowers.

Nakatsuka T, Suzuki T, Harada K, Kobayashi Y, Dohra H, Ohno H.

Plant Sci. 2019 Oct;287:110173. doi: 10.1016/j.plantsci.2019.110173. Epub 2019 Jun 24.

PMID:
31481204
4.

Draft Genome Sequence of Nitrosococcus oceani Strain NS58, a Marine Ammonia-Oxidizing Gammaproteobacterium Isolated from Tokyo Bay Sediment.

Dohra H, Arai K, Urakawa H, Fujiwara T.

Microbiol Resour Announc. 2019 Aug 29;8(35). pii: e00923-19. doi: 10.1128/MRA.00923-19.

5.

Draft Genome Sequence of Buttiauxella sp. Strain A111, Which Converts 2-Azahypoxanthine to 2-Aza-8-Oxohypoxanthine.

Choi JH, Moriuchi R, Sukprasitchai A, Tokuyama S, Kawagishi H, Dohra H.

Microbiol Resour Announc. 2019 Jul 18;8(29). pii: e00664-19. doi: 10.1128/MRA.00664-19.

6.

Isolation and characterization of a moderate thermophilic Paenibacillus naphthalenovorans strain 4B1 capable of degrading dibenzofuran from dioxin-contaminated soil in Vietnam.

Thanh LTH, Thi TVN, Shintani M, Moriuchi R, Dohra H, Loc NH, Kimbara K.

J Biosci Bioeng. 2019 Nov;128(5):571-577. doi: 10.1016/j.jbiosc.2019.05.006. Epub 2019 Jun 13.

PMID:
31202727
7.

Genome sequence analysis of the fairy ring-forming fungus Lepista sordida and gene candidates for interaction with plants.

Takano T, Yamamoto N, Suzuki T, Dohra H, Choi JH, Terashima Y, Yokoyama K, Kawagishi H, Yano K.

Sci Rep. 2019 Apr 10;9(1):5888. doi: 10.1038/s41598-019-42231-9.

8.

Evaluation of the Bactericidal and Fungicidal Activities of Poly([2-(methacryloyloxy)ethyl]trimethyl Ammonium Chloride)(Poly (METAC))-Based Materials.

Shiga T, Mori H, Uemura K, Moriuchi R, Dohra H, Yamawaki-Ogata A, Narita Y, Saito A, Kotsuchibashi Y.

Polymers (Basel). 2018 Aug 26;10(9). pii: E947. doi: 10.3390/polym10090947.

10.

Draft Genome Sequence of Streptomyces spongiicola Strain 531S, an Actinobacterium Isolated from Marine Sediment.

Dohra H, Kaweewan I, Casareto BE, Suzuki Y, Kodani S.

Microbiol Resour Announc. 2019 Jan 17;8(3). pii: e01198-18. doi: 10.1128/MRA.01198-18. eCollection 2019 Jan.

11.

Draft Genome Sequence of the Phenol-Degrading Bacterium Cupriavidus sp. Strain P-10, Isolated from Trichloroethene-Contaminated Aquifer Soil.

Suzuki K, Aziz FAA, Honjo M, Nishimura T, Masuda K, Minoura A, Kudo Y, Moriuchi R, Dohra H, Tashiro Y, Futamata H.

Microbiol Resour Announc. 2018 Nov 8;7(18). pii: e01009-18. doi: 10.1128/MRA.01009-18. eCollection 2018 Nov.

12.

Novel Self-Transmissible and Broad-Host-Range Plasmids Exogenously Captured From Anaerobic Granules or Cow Manure.

Yanagiya K, Maejima Y, Nakata H, Tokuda M, Moriuchi R, Dohra H, Inoue K, Ohkuma M, Kimbara K, Shintani M.

Front Microbiol. 2018 Nov 6;9:2602. doi: 10.3389/fmicb.2018.02602. eCollection 2018.

13.

Elementary processes of antimicrobial peptide PGLa-induced pore formation in lipid bilayers.

Parvez F, Alam JM, Dohra H, Yamazaki M.

Biochim Biophys Acta Biomembr. 2018 Nov;1860(11):2262-2271. doi: 10.1016/j.bbamem.2018.08.018. Epub 2018 Sep 3.

14.

A GH family 28 endo-polygalacturonase from the brown-rot fungus Fomitopsis palustris: Purification, gene cloning, enzymatic characterization and effects of oxalate.

Tanaka Y, Suzuki T, Nakamura L, Nakamura M, Ebihara S, Kurokura T, Iigo M, Dohra H, Habu N, Konno N.

Int J Biol Macromol. 2019 Feb 15;123:108-116. doi: 10.1016/j.ijbiomac.2018.11.004. Epub 2018 Nov 3.

PMID:
30399383
15.

Identification of a Hexenal Reductase That Modulates the Composition of Green Leaf Volatiles.

Tanaka T, Ikeda A, Shiojiri K, Ozawa R, Shiki K, Nagai-Kunihiro N, Fujita K, Sugimoto K, Yamato KT, Dohra H, Ohnishi T, Koeduka T, Matsui K.

Plant Physiol. 2018 Oct;178(2):552-564. doi: 10.1104/pp.18.00632. Epub 2018 Aug 20.

16.

Silkworms suppress the release of green leaf volatiles by mulberry leaves with an enzyme from their spinnerets.

Takai H, Ozawa R, Takabayashi J, Fujii S, Arai K, Ichiki RT, Koeduka T, Dohra H, Ohnishi T, Taketazu S, Kobayashi J, Kainoh Y, Nakamura S, Fujii T, Ishikawa Y, Kiuchi T, Katsuma S, Uefune M, Shimada T, Matsui K.

Sci Rep. 2018 Aug 9;8(1):11942. doi: 10.1038/s41598-018-30328-6.

17.

Streptopeptolin, a Cyanopeptolin-Type Peptide from Streptomyces olivochromogenes.

Kodani S, Komaki H, Hemmi H, Miyake Y, Kaweewan I, Dohra H.

ACS Omega. 2018 Jul 31;3(7):8104-8110. doi: 10.1021/acsomega.8b01042. Epub 2018 Jul 19.

18.

The effects of gene disruption of Kre6-like proteins on the phenotype of β-glucan-producing Aureobasidium pullulans.

Uchiyama H, Iwai A, Dohra H, Ohnishi T, Kato T, Park EY.

Appl Microbiol Biotechnol. 2018 May;102(10):4467-4475. doi: 10.1007/s00253-018-8947-z. Epub 2018 Mar 30.

PMID:
29600492
19.

Insulin-like peptide 3 expressed in the silkworm possesses intrinsic disulfide bonds and full biological activity.

Miyazaki T, Ishizaki M, Dohra H, Park S, Terzic A, Kato T, Kohsaka T, Park EY.

Sci Rep. 2017 Dec 11;7(1):17339. doi: 10.1038/s41598-017-17707-1.

20.

Insight into cordycepin biosynthesis of Cordyceps militaris: Comparison between a liquid surface culture and a submerged culture through transcriptomic analysis.

Suparmin A, Kato T, Dohra H, Park EY.

PLoS One. 2017 Nov 1;12(11):e0187052. doi: 10.1371/journal.pone.0187052. eCollection 2017.

21.

High-Quality Draft Genome Sequence of Burkholderia contaminans CH-1, a Gram-Negative Bacterium That Metabolizes 2-Azahypoxanthine, a Plant Growth-Regulating Compound.

Choi JH, Sugiura H, Moriuchi R, Kawagishi H, Dohra H.

Genome Announc. 2017 Oct 12;5(41). pii: e01148-17. doi: 10.1128/genomeA.01148-17.

22.

Draft Genome Sequence of Streptomyces olivochromogenes NBRC 3561, a Bioactive Peptide-Producing Actinobacterium.

Dohra H, Miyake Y, Kodani S.

Genome Announc. 2017 Sep 28;5(39). pii: e01048-17. doi: 10.1128/genomeA.01048-17.

23.

Entry of a Six-Residue Antimicrobial Peptide Derived from Lactoferricin B into Single Vesicles and Escherichia coli Cells without Damaging their Membranes.

Moniruzzaman M, Islam MZ, Sharmin S, Dohra H, Yamazaki M.

Biochemistry. 2017 Aug 22;56(33):4419-4431. doi: 10.1021/acs.biochem.6b01274. Epub 2017 Aug 9.

PMID:
28752991
24.

Genome analysis of three novel lytic Vibrio coralliilyticus phages isolated from seawater, Okinawa, Japan.

Ramphul C, Casareto BE, Dohra H, Suzuki T, Yoshimatsu K, Yoshinaga K, Suzuki Y.

Mar Genomics. 2017 Oct;35:69-75. doi: 10.1016/j.margen.2017.06.005. Epub 2017 Jul 6.

PMID:
28689690
25.
26.

The biosynthetic pathway of 2-azahypoxanthine in fairy-ring forming fungus.

Suzuki T, Yamamoto N, Choi JH, Takano T, Sasaki Y, Terashima Y, Ito A, Dohra H, Hirai H, Nakamura Y, Yano K, Kawagishi H.

Sci Rep. 2016 Dec 19;6:39087. doi: 10.1038/srep39087.

27.

RNA-seq-based evaluation of bicolor tepal pigmentation in Asiatic hybrid lilies (Lilium spp.).

Suzuki K, Suzuki T, Nakatsuka T, Dohra H, Yamagishi M, Matsuyama K, Matsuura H.

BMC Genomics. 2016 Aug 11;17(1):611. doi: 10.1186/s12864-016-2995-5.

28.

Analysis of ethanol fermentation mechanism of ethanol producing white-rot fungus Phlebia sp. MG-60 by RNA-seq.

Wang J, Suzuki T, Dohra H, Takigami S, Kako H, Soga A, Kamei I, Mori T, Kawagishi H, Hirai H.

BMC Genomics. 2016 Aug 11;17(1):616. doi: 10.1186/s12864-016-2977-7.

29.

Draft Genome Sequence of Planomonospora sphaerica JCM9374, a Rare Actinomycete.

Dohra H, Suzuki T, Inoue Y, Kodani S.

Genome Announc. 2016 Aug 4;4(4). pii: e00779-16. doi: 10.1128/genomeA.00779-16.

30.

Effects of Lipid Composition on the Entry of Cell-Penetrating Peptide Oligoarginine into Single Vesicles.

Sharmin S, Islam MZ, Karal MA, Alam Shibly SU, Dohra H, Yamazaki M.

Biochemistry. 2016 Aug 2;55(30):4154-65. doi: 10.1021/acs.biochem.6b00189. Epub 2016 Jul 22.

PMID:
27420912
31.

Complete Genome Sequence of Algoriphagus sp. Strain M8-2, Isolated from a Brackish Lake.

Muraguchi Y, Kushimoto K, Ohtsubo Y, Suzuki T, Dohra H, Kimbara K, Shintani M.

Genome Announc. 2016 May 12;4(3). pii: e00347-16. doi: 10.1128/genomeA.00347-16.

32.

Genome Sequence of Pectobacterium carotovorum Phage PPWS1, Isolated from Japanese Horseradish [Eutrema japonicum (Miq.) Koidz] Showing Soft-Rot Symptoms.

Hirata H, Kashihara M, Horiike T, Suzuki T, Dohra H, Netsu O, Tsuyumu S.

Genome Announc. 2016 Apr 21;4(2). pii: e01625-15. doi: 10.1128/genomeA.01625-15.

33.

Seasonal induction of alternative principal pathway for rose flower scent.

Hirata H, Ohnishi T, Tomida K, Ishida H, Kanda M, Sakai M, Yoshimura J, Suzuki H, Ishikawa T, Dohra H, Watanabe N.

Sci Rep. 2016 Feb 1;6:20234. doi: 10.1038/srep20234.

34.

Lactic acid is a sperm motility inactivation factor in the sperm storage tubules.

Matsuzaki M, Mizushima S, Hiyama G, Hirohashi N, Shiba K, Inaba K, Suzuki T, Dohra H, Ohnishi T, Sato Y, Kohsaka T, Ichikawa Y, Atsumi Y, Yoshimura T, Sasanami T.

Sci Rep. 2015 Dec 1;5:17643. doi: 10.1038/srep17643.

35.

Genome Sequence of a Novel Iflavirus from mRNA Sequencing of the Pupa of Bombyx mori Inoculated with Cordyceps militaris.

Suzuki T, Takeshima Y, Mikamoto T, Saeki JD, Kato T, Park EY, Kawagishi H, Dohra H.

Genome Announc. 2015 Sep 17;3(5). pii: e01039-15. doi: 10.1128/genomeA.01039-15.

36.

Plastid Proteomic Analysis in Tomato Fruit Development.

Suzuki M, Takahashi S, Kondo T, Dohra H, Ito Y, Kiriiwa Y, Hayashi M, Kamiya S, Kato M, Fujiwara M, Fukao Y, Kobayashi M, Nagata N, Motohashi R.

PLoS One. 2015 Sep 15;10(9):e0137266. doi: 10.1371/journal.pone.0137266. eCollection 2015.

37.

Antimicrobial Peptide Lactoferricin B-Induced Rapid Leakage of Internal Contents from Single Giant Unilamellar Vesicles.

Moniruzzaman M, Alam JM, Dohra H, Yamazaki M.

Biochemistry. 2015 Sep 29;54(38):5802-14. doi: 10.1021/acs.biochem.5b00594. Epub 2015 Sep 17.

PMID:
26368853
38.

Analysis of amino acid and codon usage in Paramecium bursaria.

Dohra H, Fujishima M, Suzuki H.

FEBS Lett. 2015 Oct 7;589(20 Pt B):3113-8. doi: 10.1016/j.febslet.2015.08.033. Epub 2015 Sep 1.

39.

Volatile Glycosylation in Tea Plants: Sequential Glycosylations for the Biosynthesis of Aroma β-Primeverosides Are Catalyzed by Two Camellia sinensis Glycosyltransferases.

Ohgami S, Ono E, Horikawa M, Murata J, Totsuka K, Toyonaga H, Ohba Y, Dohra H, Asai T, Matsui K, Mizutani M, Watanabe N, Ohnishi T.

Plant Physiol. 2015 Jun;168(2):464-77. doi: 10.1104/pp.15.00403. Epub 2015 Apr 28.

40.

A-WINGS: an integrated genome database for Pleurocybella porrigens (Angel's wing oyster mushroom, Sugihiratake).

Yamamoto N, Suzuki T, Kobayashi M, Dohra H, Sasaki Y, Hirai H, Yokoyama K, Kawagishi H, Yano K.

BMC Res Notes. 2014 Dec 3;7:866. doi: 10.1186/1756-0500-7-866.

41.

The birth of quail chicks after intracytoplasmic sperm injection.

Mizushima S, Hiyama G, Shiba K, Inaba K, Dohra H, Ono T, Shimada K, Sasanami T.

Development. 2014 Oct;141(19):3799-806. doi: 10.1242/dev.111765.

43.

Heterologous expression of a lectin from Pleurocybella porrigens (PPL) in Phanerochaete sordida YK-624.

Suzuki T, Dohra H, Omae S, Takeshima Y, Choi JH, Hirai H, Kawagishi H.

J Microbiol Methods. 2014 May;100:70-6. doi: 10.1016/j.mimet.2014.02.016. Epub 2014 Mar 11.

PMID:
24631556
44.

Comparison of gene expression of Paramecium bursaria with and without Chlorella variabilis symbionts.

Kodama Y, Suzuki H, Dohra H, Sugii M, Kitazume T, Yamaguchi K, Shigenobu S, Fujishima M.

BMC Genomics. 2014 Mar 10;15:183. doi: 10.1186/1471-2164-15-183.

45.

Sperm activation by heat shock protein 70 supports the migration of sperm released from sperm storage tubules in Japanese quail (Coturnix japonica).

Hiyama G, Matsuzaki M, Mizushima S, Dohra H, Ikegami K, Yoshimura T, Shiba K, Inaba K, Sasanami T.

Reproduction. 2013 Dec 19;147(2):167-78. doi: 10.1530/REP-13-0439. Print 2014 Feb.

PMID:
24194572
46.

Draft Genome Sequence of Holospora undulata Strain HU1, a Micronucleus-Specific Symbiont of the Ciliate Paramecium caudatum.

Dohra H, Suzuki H, Suzuki T, Tanaka K, Fujishima M.

Genome Announc. 2013 Aug 22;1(4). pii: e00664-13. doi: 10.1128/genomeA.00664-13.

47.

A new omics data resource of Pleurocybella porrigens for gene discovery.

Suzuki T, Igarashi K, Dohra H, Someya T, Takano T, Harada K, Omae S, Hirai H, Yano K, Kawagishi H.

PLoS One. 2013 Jul 23;8(7):e69681. doi: 10.1371/journal.pone.0069681. Print 2013.

48.

A novel core fucose-specific lectin from the mushroom Pholiota squarrosa.

Kobayashi Y, Tateno H, Dohra H, Moriwaki K, Miyoshi E, Hirabayashi J, Kawagishi H.

J Biol Chem. 2012 Oct 5;287(41):33973-82. doi: 10.1074/jbc.M111.327692. Epub 2012 Aug 7.

49.

Sperm proteasome degrades egg envelope glycoprotein ZP1 during fertilization of Japanese quail (Coturnix japonica).

Sasanami T, Sugiura K, Tokumoto T, Yoshizaki N, Dohra H, Nishio S, Mizushima S, Hiyama G, Matsuda T.

Reproduction. 2012 Oct;144(4):423-31. doi: 10.1530/REP-12-0165. Epub 2012 Aug 2.

PMID:
22859519
50.

Mannose-specific lectin from the mushroom Hygrophorus russula.

Suzuki T, Sugiyama K, Hirai H, Ito H, Morita T, Dohra H, Murata T, Usui T, Tateno H, Hirabayashi J, Kobayashi Y, Kawagishi H.

Glycobiology. 2012 May;22(5):616-29. doi: 10.1093/glycob/cwr187. Epub 2011 Dec 22.

PMID:
22198564

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