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Items: 1 to 50 of 149

1.

Metagenomics of Atacama Lithobiontic Extremophile Life Unveils Highlights on Fungal Communities, Biogeochemical Cycles and Carbohydrate-Active Enzymes.

Gómez-Silva B, Vilo-Muñoz C, Galetović A, Dong Q, Castelán-Sánchez HG, Pérez-Llano Y, Sánchez-Carbente MDR, Dávila-Ramos S, Cortés-López NG, Martínez-Ávila L, Dobson ADW, Batista-García RA.

Microorganisms. 2019 Nov 27;7(12). pii: E619. doi: 10.3390/microorganisms7120619.

2.

A Review on Viral Metagenomics in Extreme Environments.

Dávila-Ramos S, Castelán-Sánchez HG, Martínez-Ávila L, Sánchez-Carbente MDR, Peralta R, Hernández-Mendoza A, Dobson ADW, Gonzalez RA, Pastor N, Batista-García RA.

Front Microbiol. 2019 Oct 18;10:2403. doi: 10.3389/fmicb.2019.02403. eCollection 2019. Review.

3.
5.

Genome Mining Coupled with OSMAC-Based Cultivation Reveal Differential Production of Surugamide A by the Marine Sponge Isolate Streptomyces sp. SM17 When Compared to Its Terrestrial Relative S. albidoflavus J1074.

Almeida EL, Kaur N, Jennings LK, Carrillo Rincón AF, Jackson SA, Thomas OP, Dobson ADW.

Microorganisms. 2019 Sep 26;7(10). pii: E394. doi: 10.3390/microorganisms7100394.

7.

Microalgal Enzymes with Biotechnological Applications.

Vingiani GM, De Luca P, Ianora A, Dobson ADW, Lauritano C.

Mar Drugs. 2019 Aug 5;17(8). pii: E459. doi: 10.3390/md17080459. Review.

8.

Integrating models of human behaviour between the individual and population levels to inform conservation interventions.

Dobson ADM, de Lange E, Keane A, Ibbett H, Milner-Gulland EJ.

Philos Trans R Soc Lond B Biol Sci. 2019 Sep 16;374(1781):20180053. doi: 10.1098/rstb.2018.0053. Epub 2019 Jul 29.

9.

Biochemical Characterization of a Novel Monospecific Endo-β-1,4-Glucanase Belonging to GH Family 5 From a Rhizosphere Metagenomic Library.

Wierzbicka-Woś A, Henneberger R, Batista-García RA, Martínez-Ávila L, Jackson SA, Kennedy J, Dobson ADW.

Front Microbiol. 2019 Jun 14;10:1342. doi: 10.3389/fmicb.2019.01342. eCollection 2019.

10.

Microbial Population Changes in Decaying Ascophyllum nodosum Result in Macroalgal-Polysaccharide-Degrading Bacteria with Potential Applicability in Enzyme-Assisted Extraction Technologies.

Ihua MW, Guihéneuf F, Mohammed H, Margassery LM, Jackson SA, Stengel DB, Clarke DJ, Dobson ADW.

Mar Drugs. 2019 Mar 29;17(4). pii: E200. doi: 10.3390/md17040200.

11.

Extremophile deep-sea viral communities from hydrothermal vents: Structural and functional analysis.

Castelán-Sánchez HG, Lopéz-Rosas I, García-Suastegui WA, Peralta R, Dobson ADW, Batista-García RA, Dávila-Ramos S.

Mar Genomics. 2019 Aug;46:16-28. doi: 10.1016/j.margen.2019.03.001. Epub 2019 Mar 9.

12.

Genome Sequence of Paracoccus sp. JM45, a Bacterial Strain Isolated from a Marine Sponge with a Dual Quorum Sensing Inhibition Activity.

Gutiérrez-Barranquero JA, Parages ML, Dobson ADW, Reen FJ, O'Gara F.

Microbiol Resour Announc. 2019 Jan 10;8(2). pii: e01496-18. doi: 10.1128/MRA.01496-18. eCollection 2019 Jan.

13.

Graphene Facilitates Biomethane Production from Protein-Derived Glycine in Anaerobic Digestion.

Lin R, Deng C, Cheng J, Xia A, Lens PNL, Jackson SA, Dobson ADW, Murphy JD.

iScience. 2018 Dec 21;10:158-170. doi: 10.1016/j.isci.2018.11.030. Epub 2018 Nov 22.

14.

Detecting deterrence from patrol data.

Dobson ADM, Milner-Gulland EJ, Beale CM, Ibbett H, Keane A.

Conserv Biol. 2019 Jun;33(3):665-675. doi: 10.1111/cobi.13222. Epub 2018 Nov 28.

PMID:
30238502
15.

Dominance of the genus Polaromonas in the microbial ecology of an Intermittently Aerated Sequencing Batch Reactor (IASBR) treating dairy processing wastewater under varying aeration rates.

Gil-Pulido B, Tarpey E, Finnegan W, Zhan X, Dobson AD, O'Leary N.

J Dairy Res. 2018 Aug;85(3):388-390. doi: 10.1017/S0022029918000572. Epub 2018 Aug 8.

PMID:
30088464
16.

Extending the "One Strain Many Compounds" (OSMAC) Principle to Marine Microorganisms.

Romano S, Jackson SA, Patry S, Dobson ADW.

Mar Drugs. 2018 Jul 23;16(7). pii: E244. doi: 10.3390/md16070244. Review.

17.

Evaluation of dairy processing wastewater biotreatment in an IASBR system: Aeration rate impacts on performance and microbial ecology.

Gil-Pulido B, Tarpey E, Almeida EL, Finnegan W, Zhan X, Dobson ADW, O'Leary N.

Biotechnol Rep (Amst). 2018 Jun 5;19:e00263. doi: 10.1016/j.btre.2018.e00263. eCollection 2018 Sep.

18.
19.

Diverse and Abundant Secondary Metabolism Biosynthetic Gene Clusters in the Genomes of Marine Sponge Derived Streptomyces spp. Isolates.

Jackson SA, Crossman L, Almeida EL, Margassery LM, Kennedy J, Dobson ADW.

Mar Drugs. 2018 Feb 20;16(2). pii: E67. doi: 10.3390/md16020067.

20.

Draft Genome Sequence of the Antimycin-Producing Bacterium Streptomyces sp. Strain SM8, Isolated from the Marine Sponge Haliclona simulans.

Almeida EL, Margassery LM, Kennedy J, Dobson ADW.

Genome Announc. 2018 Jan 25;6(4). pii: e01535-17. doi: 10.1128/genomeA.01535-17.

21.

Draft Genome Sequence of Pseudomonas putida CA-3, a Bacterium Capable of Styrene Degradation and Medium-Chain-Length Polyhydroxyalkanoate Synthesis.

Almeida EL, Margassery LM, O'Leary N, Dobson ADW.

Genome Announc. 2018 Jan 25;6(4). pii: e01534-17. doi: 10.1128/genomeA.01534-17.

22.

Disruption of N-acyl-homoserine lactone-specific signalling and virulence in clinical pathogens by marine sponge bacteria.

Gutiérrez-Barranquero JA, Reen FJ, Parages ML, McCarthy R, Dobson ADW, O'Gara F.

Microb Biotechnol. 2019 Sep;12(5):1049-1063. doi: 10.1111/1751-7915.12867. Epub 2017 Nov 3.

23.

Identification of Secondary Metabolite Gene Clusters in the Pseudovibrio Genus Reveals Encouraging Biosynthetic Potential toward the Production of Novel Bioactive Compounds.

Naughton LM, Romano S, O'Gara F, Dobson ADW.

Front Microbiol. 2017 Aug 18;8:1494. doi: 10.3389/fmicb.2017.01494. eCollection 2017.

24.

Current Status and Future Prospects of Marine Natural Products (MNPs) as Antimicrobials.

Choudhary A, Naughton LM, Montánchez I, Dobson ADW, Rai DK.

Mar Drugs. 2017 Aug 28;15(9). pii: E272. doi: 10.3390/md15090272. Review.

25.

Synthesis of Nm-PHB (nanomelanin-polyhydroxy butyrate) nanocomposite film and its protective effect against biofilm-forming multi drug resistant Staphylococcus aureus.

Kiran GS, Jackson SA, Priyadharsini S, Dobson ADW, Selvin J.

Sci Rep. 2017 Aug 22;7(1):9167. doi: 10.1038/s41598-017-08816-y.

26.

Degradation intermediates of polyhydroxy butyrate inhibits phenotypic expression of virulence factors and biofilm formation in luminescent Vibrio sp. PUGSK8.

Seghal Kiran G, Priyadharshini S, Dobson ADW, Gnanamani E, Selvin J.

NPJ Biofilms Microbiomes. 2016 Jun 15;2:16002. doi: 10.1038/npjbiofilms.2016.2. eCollection 2016.

27.

Biotechnological Potential of Cold Adapted Pseudoalteromonas spp. Isolated from 'Deep Sea' Sponges.

Borchert E, Knobloch S, Dwyer E, Flynn S, Jackson SA, Jóhannsson R, Marteinsson VT, O'Gara F, Dobson ADW.

Mar Drugs. 2017 Jun 19;15(6). pii: E184. doi: 10.3390/md15060184.

28.

Simple screening protocol for identification of potential mycoremediation tools for the elimination of polycyclic aromatic hydrocarbons and phenols from hyperalkalophile industrial effluents.

Batista-García RA, Kumar VV, Ariste A, Tovar-Herrera OE, Savary O, Peidro-Guzmán H, González-Abradelo D, Jackson SA, Dobson ADW, Sánchez-Carbente MDR, Folch-Mallol JL, Leduc R, Cabana H.

J Environ Manage. 2017 Aug 1;198(Pt 2):1-11. doi: 10.1016/j.jenvman.2017.05.010. Epub 2017 May 9.

PMID:
28499155
29.

Lyme disease ecology in a changing world: consensus, uncertainty and critical gaps for improving control.

Kilpatrick AM, Dobson ADM, Levi T, Salkeld DJ, Swei A, Ginsberg HS, Kjemtrup A, Padgett KA, Jensen PM, Fish D, Ogden NH, Diuk-Wasser MA.

Philos Trans R Soc Lond B Biol Sci. 2017 Jun 5;372(1722). pii: 20160117. doi: 10.1098/rstb.2016.0117. Review.

30.

Characterization of lignocellulolytic activities from fungi isolated from the deep-sea sponge Stelletta normani.

Batista-García RA, Sutton T, Jackson SA, Tovar-Herrera OE, Balcázar-López E, Sánchez-Carbente MD, Sánchez-Reyes A, Dobson AD, Folch-Mallol JL.

PLoS One. 2017 Mar 24;12(3):e0173750. doi: 10.1371/journal.pone.0173750. eCollection 2017.

31.

Study of the performance of a thermophilic biological methanation system.

Guneratnam AJ, Ahern E, FitzGerald JA, Jackson SA, Xia A, Dobson ADW, Murphy JD.

Bioresour Technol. 2017 Feb;225:308-315. doi: 10.1016/j.biortech.2016.11.066. Epub 2016 Nov 18.

PMID:
27898322
32.

Mycotoxins in spices and herbs-An update.

Kabak B, Dobson AD.

Crit Rev Food Sci Nutr. 2017 Jan 2;57(1):18-34. Review.

PMID:
26528824
33.

Diversity of Natural Product Biosynthetic Genes in the Microbiome of the Deep Sea Sponges Inflatella pellicula, Poecillastra compressa, and Stelletta normani.

Borchert E, Jackson SA, O'Gara F, Dobson AD.

Front Microbiol. 2016 Jun 29;7:1027. doi: 10.3389/fmicb.2016.01027. eCollection 2016.

34.

Comparative Genomic Analysis Reveals a Diverse Repertoire of Genes Involved in Prokaryote-Eukaryote Interactions within the Pseudovibrio Genus.

Romano S, Fernàndez-Guerra A, Reen FJ, Glöckner FO, Crowley SP, O'Sullivan O, Cotter PD, Adams C, Dobson AD, O'Gara F.

Front Microbiol. 2016 Mar 30;7:387. doi: 10.3389/fmicb.2016.00387. eCollection 2016.

35.

Epidemiological Implications of Host Biodiversity and Vector Biology: Key Insights from Simple Models.

Dobson AD, Auld SK.

Am Nat. 2016 Apr;187(4):405-22. doi: 10.1086/685445. Epub 2016 Feb 29.

PMID:
27028070
36.

Integrated (Meta) Genomic and Synthetic Biology Approaches to Develop New Biocatalysts.

Parages ML, Gutiérrez-Barranquero JA, Reen FJ, Dobson AD, O'Gara F.

Mar Drugs. 2016 Mar 21;14(3). pii: E62. doi: 10.3390/md14030062. Review.

37.

Correction: Rapid Diagnostic Tests for Dengue Virus Infection in Febrile Cambodian Children: Diagnostic Accuracy and Incorporation into Diagnostic Algorithms.

Carter MJ, Emary KR, Moore CE, Parry CM, Sona S, Putchhat H, Reaksmey S, Chanpheaktra N, Stoesser N, Dobson AD, Day NP, Kumar V, Blacksell SD.

PLoS Negl Trop Dis. 2016 Feb 5;10(2):e0004453. doi: 10.1371/journal.pntd.0004453. eCollection 2016 Feb. No abstract available.

38.

Methanosarcina Play an Important Role in Anaerobic Co-Digestion of the Seaweed Ulva lactuca: Taxonomy and Predicted Metabolism of Functional Microbial Communities.

FitzGerald JA, Allen E, Wall DM, Jackson SA, Murphy JD, Dobson AD.

PLoS One. 2015 Nov 10;10(11):e0142603. doi: 10.1371/journal.pone.0142603. eCollection 2015.

39.

Insufficient evidence of infection-induced phototactic behaviour in Spodoptera exigua: a comment on van Houte et al. (2014).

Dobson AD, Auld SK, Tinsley MC.

Biol Lett. 2015 Oct;11(10). pii: 20150132. doi: 10.1098/rsbl.2015.0132. No abstract available.

40.

The Sound of Silence: Activating Silent Biosynthetic Gene Clusters in Marine Microorganisms.

Reen FJ, Romano S, Dobson AD, O'Gara F.

Mar Drugs. 2015 Jul 31;13(8):4754-83. doi: 10.3390/md13084754. Review.

41.

Emerging concepts promising new horizons for marine biodiscovery and synthetic biology.

Reen FJ, Gutiérrez-Barranquero JA, Dobson AD, Adams C, O'Gara F.

Mar Drugs. 2015 May 13;13(5):2924-54. doi: 10.3390/md13052924. Review.

42.

Maribacter spongiicola sp. nov. and Maribacter vaceletii sp. nov., isolated from marine sponges, and emended description of the genus Maribacter.

Jackson SA, Kennedy J, Morrissey JP, O'Gara F, Dobson AD.

Int J Syst Evol Microbiol. 2015 Jul;65(7):2097-103. doi: 10.1099/ijs.0.000224. Epub 2015 Apr 1.

PMID:
25833155
43.

Metagenomics for the discovery of novel biosurfactants of environmental interest from marine ecosystems.

Jackson SA, Borchert E, O'Gara F, Dobson AD.

Curr Opin Biotechnol. 2015 Jun;33:176-82. doi: 10.1016/j.copbio.2015.03.004. Epub 2015 Mar 24. Review.

PMID:
25812477
44.

Rapid diagnostic tests for dengue virus infection in febrile Cambodian children: diagnostic accuracy and incorporation into diagnostic algorithms.

Carter MJ, Emary KR, Moore CE, Parry CM, Sona S, Putchhat H, Reaksmey S, Chanpheaktra N, Stoesser N, Dobson AD, Day NP, Kumar V, Blacksell SD.

PLoS Negl Trop Dis. 2015 Feb 24;9(2):e0003424. doi: 10.1371/journal.pntd.0003424. eCollection 2015 Feb. Erratum in: PLoS Negl Trop Dis. 2015 Mar;9(3):e0003654. PLoS Negl Trop Dis. 2016 Feb;10(2):e0004453. Moore, Catherine E [corrected to Moore, Catrin E].

45.

Erratum to: deciphering the role of coumarin as a novel quorum sensing inhibitor suppressing virulence phenotypes in bacterial pathogens.

Gutiérrez-Barranquero JA, Reen FJ, McCarthy RR, Dobson AD, O'Gara F.

Appl Microbiol Biotechnol. 2015 Mar;99(6):2923. doi: 10.1007/s00253-015-6465-9. No abstract available.

PMID:
25693673
46.

Inhibition of the growth of Bacillus subtilis DSM10 by a newly discovered antibacterial protein from the soil metagenome.

O'Mahony MM, Henneberger R, Selvin J, Kennedy J, Doohan F, Marchesi JR, Dobson AD.

Bioengineered. 2015;6(2):89-98. doi: 10.1080/21655979.2015.1018493.

47.

A novel erythromycin resistance plasmid from Bacillus sp. strain HS24, isolated from the marine sponge Haliclona simulans.

Barbosa TM, Phelan RW, Leong D, Morrissey JP, Adams C, Dobson AD, O'Gara F.

PLoS One. 2014 Dec 30;9(12):e115583. doi: 10.1371/journal.pone.0115583. eCollection 2014.

48.

Characterisation of non-autoinducing tropodithietic Acid (TDA) production from marine sponge Pseudovibrio species.

Harrington C, Reen FJ, Mooij MJ, Stewart FA, Chabot JB, Guerra AF, Glöckner FO, Nielsen KF, Gram L, Dobson AD, Adams C, O'Gara F.

Mar Drugs. 2014 Dec 10;12(12):5960-78. doi: 10.3390/md12125960.

49.

Marine Pseudovibrio sp. as a novel source of antimicrobials.

Crowley SP, O'Gara F, O'Sullivan O, Cotter PD, Dobson AD.

Mar Drugs. 2014 Dec 9;12(12):5916-29. doi: 10.3390/md12125916. Review.

50.

A halotolerant thermostable lipase from the marine bacterium Oceanobacillus sp. PUMB02 with an ability to disrupt bacterial biofilms.

Seghal Kiran G, Nishanth Lipton A, Kennedy J, Dobson AD, Selvin J.

Bioengineered. 2014 Sep-Oct;5(5):305-18. doi: 10.4161/bioe.29898.

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