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Items: 25

1.

The novel lncRNA lnc-NR2F1 is pro-neurogenic and mutated in human neurodevelopmental disorders.

Ang CE, Ma Q, Wapinski OL, Fan S, Flynn RA, Lee QY, Coe B, Onoguchi M, Olmos VH, Do BT, Dukes-Rimsky L, Xu J, Tanabe K, Wang L, Elling U, Penninger JM, Zhao Y, Qu K, Eichler EE, Srivastava A, Wernig M, Chang HY.

Elife. 2019 Jan 10;8. pii: e41770. doi: 10.7554/eLife.41770.

2.

Behavioral problems are associated with cognitive and language scores in toddlers born extremely preterm.

Lowe JR, Fuller JF, Do BT, Vohr BR, Das A, Hintz SR, Watterberg KL, Higgins RD; Eunice Kennedy Shriver National Institute of Child Health; Human Development Neonatal Research Network.

Early Hum Dev. 2019 Jan;128:48-54. doi: 10.1016/j.earlhumdev.2018.11.007. Epub 2018 Dec 4.

PMID:
30522091
3.

Opportunities and obstacles for deep learning in biology and medicine.

Ching T, Himmelstein DS, Beaulieu-Jones BK, Kalinin AA, Do BT, Way GP, Ferrero E, Agapow PM, Zietz M, Hoffman MM, Xie W, Rosen GL, Lengerich BJ, Israeli J, Lanchantin J, Woloszynek S, Carpenter AE, Shrikumar A, Xu J, Cofer EM, Lavender CA, Turaga SC, Alexandari AM, Lu Z, Harris DJ, DeCaprio D, Qi Y, Kundaje A, Peng Y, Wiley LK, Segler MHS, Boca SM, Swamidass SJ, Huang A, Gitter A, Greene CS.

J R Soc Interface. 2018 Apr;15(141). pii: 20170387. doi: 10.1098/rsif.2017.0387. Review.

4.

Outcome of Preterm Infants with Transient Cystic Periventricular Leukomalacia on Serial Cranial Imaging Up to Term Equivalent Age.

Sarkar S, Shankaran S, Barks J, Do BT, Laptook AR, Das A, Ambalavanan N, Van Meurs KP, Bell EF, Sanchez PJ, Hintz SR, Wyckoff MH, Stoll BJ, Carlo WA; Eunice Kennedy Shriver National Institute of Child Health and Human Development Neonatal Research Network.

J Pediatr. 2018 Apr;195:59-65.e3. doi: 10.1016/j.jpeds.2017.12.010. Epub 2018 Feb 2.

5.

Late-onset Sepsis in Extremely Premature Infants: 2000-2011.

Greenberg RG, Kandefer S, Do BT, Smith PB, Stoll BJ, Bell EF, Carlo WA, Laptook AR, Sánchez PJ, Shankaran S, Van Meurs KP, Ball MB, Hale EC, Newman NS, Das A, Higgins RD, Cotten CM; Eunice Kennedy Shriver National Institute of Child Health and Human Development Neonatal Research Network.

Pediatr Infect Dis J. 2017 Aug;36(8):774-779. doi: 10.1097/INF.0000000000001570.

6.

Efficacy of pharmacologic closure of patent ductus arteriosus in small-for-gestational-age extremely preterm infants.

Boghossian NS, Do BT, Bell EF, Dagle JM, Brumbaugh JE, Stoll BJ, Vohr BR, Das A, Shankaran S, Sanchez PJ, Wyckoff MH, Bethany Ball M; Eunice Kennedy Shriver National Institute of Child Health and Human Development Neonatal Research Network.

Early Hum Dev. 2017 Oct;113:10-17. doi: 10.1016/j.earlhumdev.2017.07.011. Epub 2017 Jul 8.

7.

Clinical Practice Guideline: Benign Paroxysmal Positional Vertigo (Update).

Bhattacharyya N, Gubbels SP, Schwartz SR, Edlow JA, El-Kashlan H, Fife T, Holmberg JM, Mahoney K, Hollingsworth DB, Roberts R, Seidman MD, Steiner RW, Do BT, Voelker CC, Waguespack RW, Corrigan MD.

Otolaryngol Head Neck Surg. 2017 Mar;156(3_suppl):S1-S47. doi: 10.1177/0194599816689667.

PMID:
28248609
8.

irCLIP platform for efficient characterization of protein-RNA interactions.

Zarnegar BJ, Flynn RA, Shen Y, Do BT, Chang HY, Khavari PA.

Nat Methods. 2016 Jun;13(6):489-92. doi: 10.1038/nmeth.3840. Epub 2016 Apr 25.

9.

Stress from Nucleotide Depletion Activates the Transcriptional Regulator HEXIM1 to Suppress Melanoma.

Tan JL, Fogley RD, Flynn RA, Ablain J, Yang S, Saint-André V, Fan ZP, Do BT, Laga AC, Fujinaga K, Santoriello C, Greer CB, Kim YJ, Clohessy JG, Bothmer A, Pandell N, Avagyan S, Brogie JE, van Rooijen E, Hagedorn EJ, Shyh-Chang N, White RM, Price DH, Pandolfi PP, Peterlin BM, Zhou Y, Kim TH, Asara JM, Chang HY, Young RA, Zon LI.

Mol Cell. 2016 Apr 7;62(1):34-46. doi: 10.1016/j.molcel.2016.03.013.

10.

Medulloblastoma-associated DDX3 variant selectively alters the translational response to stress.

Oh S, Flynn RA, Floor SN, Purzner J, Martin L, Do BT, Schubert S, Vaka D, Morrissy S, Li Y, Kool M, Hovestadt V, Jones DT, Northcott PA, Risch T, Warnatz HJ, Yaspo ML, Adams CM, Leib RD, Breese M, Marra MA, Malkin D, Lichter P, Doudna JA, Pfister SM, Taylor MD, Chang HY, Cho YJ.

Oncotarget. 2016 May 10;7(19):28169-82. doi: 10.18632/oncotarget.8612.

11.

7SK-BAF axis controls pervasive transcription at enhancers.

Flynn RA, Do BT, Rubin AJ, Calo E, Lee B, Kuchelmeister H, Rale M, Chu C, Kool ET, Wysocka J, Khavari PA, Chang HY.

Nat Struct Mol Biol. 2016 Mar;23(3):231-8. doi: 10.1038/nsmb.3176. Epub 2016 Feb 15.

12.

Annual Incidence of Knee Symptoms and Four Knee Osteoarthritis Outcomes in the Johnston County Osteoarthritis Project.

Murphy LB, Moss S, Do BT, Helmick CG, Schwartz TA, Barbour KE, Renner J, Kalsbeek W, Jordan JM.

Arthritis Care Res (Hoboken). 2016 Jan;68(1):55-65. doi: 10.1002/acr.22641.

13.

Dissecting noncoding and pathogen RNA-protein interactomes.

Flynn RA, Martin L, Spitale RC, Do BT, Sagan SM, Zarnegar B, Qu K, Khavari PA, Quake SR, Sarnow P, Chang HY.

RNA. 2015 Jan;21(1):135-43. doi: 10.1261/rna.047803.114. Epub 2014 Nov 19.

14.

Dicer-microRNA-Myc circuit promotes transcription of hundreds of long noncoding RNAs.

Zheng GX, Do BT, Webster DE, Khavari PA, Chang HY.

Nat Struct Mol Biol. 2014 Jul;21(7):585-90. doi: 10.1038/nsmb.2842. Epub 2014 Jun 15.

15.

Respiratory outcomes of the surfactant positive pressure and oximetry randomized trial (SUPPORT).

Stevens TP, Finer NN, Carlo WA, Szilagyi PG, Phelps DL, Walsh MC, Gantz MG, Laptook AR, Yoder BA, Faix RG, Newman JE, Das A, Do BT, Schibler K, Rich W, Newman NS, Ehrenkranz RA, Peralta-Carcelen M, Vohr BR, Wilson-Costello DE, Yolton K, Heyne RJ, Evans PW, Vaucher YE, Adams-Chapman I, McGowan EC, Bodnar A, Pappas A, Hintz SR, Acarregui MJ, Fuller J, Goldstein RF, Bauer CR, O'Shea TM, Myers GJ, Higgins RD; SUPPORT Study Group of the Eunice Kennedy Shriver National Institute of Child Health and Human Development Neonatal Research Network.

J Pediatr. 2014 Aug;165(2):240-249.e4. doi: 10.1016/j.jpeds.2014.02.054. Epub 2014 Apr 13.

16.

Monitoring healthy people 2010 arthritis management objectives: education and clinician counseling for weight loss and exercise.

Do BT, Hootman JM, Helmick CG, Brady TJ.

Ann Fam Med. 2011 Mar-Apr;9(2):136-41. doi: 10.1370/afm.1210.

17.
18.

Properties of optical breakdown in BK7 glass induced by an extended-cavity femtosecond laser oscillator.

Do BT, Phillips MC, Miller PA, Kimmel MW, Britsch J, Cho SH.

Opt Express. 2009 Feb 16;17(4):2739-55.

PMID:
19219179
19.

Bulk and surface laser damage of silica by picosecond and nanosecond pulses at 1064 nm.

Smith AV, Do BT.

Appl Opt. 2008 Sep 10;47(26):4812-32.

PMID:
18784787
20.

Stemless self-quenching reporter molecules identify target sequences in mRNA.

Gifford LK, Jordan D, Pattanayak V, Vernovsky K, Do BT, Gewirtz AM, Lu P.

Anal Biochem. 2005 Dec 1;347(1):77-88. Epub 2005 Sep 19.

PMID:
16246289
21.

Identification of antisense nucleic acid hybridization sites in mRNA molecules with self-quenching fluorescent reporter molecules.

Gifford LK, Opalinska JB, Jordan D, Pattanayak V, Greenham P, Kalota A, Robbins M, Vernovsky K, Rodriguez LC, Do BT, Lu P, Gewirtz AM.

Nucleic Acids Res. 2005 Feb 17;33(3):e28.

22.

Formation, isomerization, and derivatization of Keggin tungstoaluminates.

Cowan JJ, Bailey AJ, Heintz RA, Do BT, Hardcastle KI, Hill CL, Weinstock IA.

Inorg Chem. 2001 Dec 17;40(26):6666-75.

PMID:
11735477
23.

Ag(5)PV(2)Mo(10)O(40), a heterogeneous catalyst for air-based selective oxidation at ambient temperature.

Rhule JT, Neiwert WA, Hardcastle KI, Do BT, Hill CL.

J Am Chem Soc. 2001 Dec 5;123(48):12101-2. No abstract available.

PMID:
11724625
24.
25.

Differential structure-function requirements of the transmembranal domain of the B cell antigen receptor.

Parikh VS, Bishop GA, Liu KJ, Do BT, Ghosh MR, Kim BS, Tucker PW.

J Exp Med. 1992 Oct 1;176(4):1025-31.

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