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Items: 39

1.

Considerations and consequences of allowing DNA sequence data as types of fungal taxa.

Zamora JC, Svensson M, Kirschner R, Olariaga I, Ryman S, Parra LA, Geml J, Rosling A, Adamčík S, Ahti T, Aime MC, Ainsworth AM, Albert L, Albertó E, García AA, Ageev D, Agerer R, Aguirre-Hudson B, Ammirati J, Andersson H, Angelini C, Antonín V, Aoki T, Aptroot A, Argaud D, Sosa BIA, Aronsen A, Arup U, Asgari B, Assyov B, Atienza V, Bandini D, Baptista-Ferreira JL, Baral HO, Baroni T, Barreto RW, Beker H, Bell A, Bellanger JM, Bellù F, Bemmann M, Bendiksby M, Bendiksen E, Bendiksen K, Benedek L, Bérešová-Guttová A, Berger F, Berndt R, Bernicchia A, Biketova AY, Bizio E, Bjork C, Boekhout T, Boertmann D, Böhning T, Boittin F, Boluda CG, Boomsluiter MW, Borovička J, Brandrud TE, Braun U, Brodo I, Bulyonkova T, Burdsall HH Jr, Buyck B, Burgaz AR, Calatayud V, Callac P, Campo E, Candusso M, Capoen B, Carbó J, Carbone M, Castañeda-Ruiz RF, Castellano MA, Chen J, Clerc P, Consiglio G, Corriol G, Courtecuisse R, Crespo A, Cripps C, Crous PW, da Silva GA, da Silva M, Dam M, Dam N, Dämmrich F, Das K, Davies L, De Crop E, De Kesel A, De Lange R, De Madrignac Bonzi B, Dela Cruz TEE, Delgat L, Demoulin V, Desjardin DE, Diederich P, Dima B, Dios MM, Divakar PK, Douanla-Meli C, Douglas B, Drechsler-Santos ER, Dyer PS, Eberhardt U, Ertz D, Esteve-Raventós F, Salazar JAE, Evenson V, Eyssartier G, Farkas E, Favre A, Fedosova AG, Filippa M, Finy P, Flakus A, Fos S, Fournier J, Fraiture A, Franchi P, Molano AEF, Friebes G, Frisch A, Fryday A, Furci G, Márquez RG, Garbelotto M, García-Martín JM, Otálora MAG, Sánchez DG, Gardiennet A, Garnica S, Benavent IG, Gates G, da Cruz Lima Gerlach A, Ghobad-Nejhad M, Gibertoni TB, Grebenc T, Greilhuber I, Grishkan B, Groenewald JZ, Grube M, Gruhn G, Gueidan C, Gulden G, Gusmão LF, Hafellner J, Hairaud M, Halama M, Hallenberg N, Halling RE, Hansen K, Harder CB, Heilmann-Clausen J, Helleman S, Henriot A, Hernandez-Restrepo M, Herve R, Hobart C, Hoffmeister M, Høiland K, Holec J, Holien H, Hughes K, Hubka V, Huhtinen S, Ivančević B, Jagers M, Jaklitsch W, Jansen A, Jayawardena RS, Jeppesen TS, Jeppson M, Johnston P, Jørgensen PM, Kärnefelt I, Kalinina LB, Kantvilas G, Karadelev M, Kasuya T, Kautmanová I, Kerrigan RW, Kirchmair M, Kiyashko A, Knapp DG, Knudsen H, Knudsen K, Knutsson T, Kolařík M, Kõljalg U, Košuthová A, Koszka A, Kotiranta H, Kotkova V, Koukol O, Kout J, Kovács GM, Kříž M, Kruys Å, Kučera V, Kudzma L, Kuhar F, Kukwa M, Arun Kumar TK, Kunca V, Kušan I, Kuyper TW, Lado C, Læssøe T, Lainé P, Langer E, Larsson E, Larsson KH, Laursen G, Lechat C, Lee S, Lendemer JC, Levin L, Lindemann U, Lindström H, Liu X, Hernandez RCL, Llop E, Locsmándi C, Lodge DJ, Loizides M, Lőkös L, Luangsa-Ard J, Lüderitz M, Lumbsch T, Lutz M, Mahoney D, Malysheva E, Malysheva V, Manimohan P, Marin-Felix Y, Marques G, Martínez-Gil R, Marson G, Mata G, Matheny PB, Mathiassen GH, Matočec N, Mayrhofer H, Mehrabi M, Melo I, Mešić A, Methven AS, Miettinen O, Romero AMM, Miller AN, Mitchell JK, Moberg R, Moreau PA, Moreno G, Morozova O, Morte A, Muggia L, González GM, Myllys L, Nagy I, Nagy LG, Neves MA, Niemelä T, Nimis PL, Niveiro N, Noordeloos ME, Nordin A, Noumeur SR, Novozhilov Y, Nuytinck J, Ohenoja E, Fiuza PO, Orange A, Ordynets A, Ortiz-Santana B, Pacheco L, Pál-Fám F, Palacio M, Palice Z, Papp V, Pärtel K, Pawlowska J, Paz A, Peintner U, Pennycook S, Pereira OL, Daniëls PP, Pérez-De-Gregorio Capella MÀ, Del Amo CMP, Gorjón SP, Pérez-Ortega S, Pérez-Vargas I, Perry BA, Petersen JH, Petersen RH, Pfister DH, Phukhamsakda C, Piątek M, Piepenbring M, Pino-Bodas R, Esquivel JPP, Pirot P, Popov ES, Popoff O, Álvaro MP, Printzen C, Psurtseva N, Purahong W, Quijada L, Rambold G, Ramírez NA, Raja H, Raspé O, Raymundo T, Réblová M, Rebriev YA, de Dios Reyes García J, Ripoll MÁR, Richard F, Richardson MJ, Rico VJ, Robledo GL, Barbosa FR, Rodriguez-Caycedo C, Rodriguez-Flakus P, Ronikier A, Casas LR, Rusevska K, Saar G, Saar I, Salcedo I, Martínez SMS, Montoya CAS, Sánchez-Ramírez S, Sandoval-Sierra JV, Santamaria S, Monteiro JS, Schroers HJ, Schulz B, Schmidt-Stohn G, Schumacher T, Senn-Irlet B, Ševčíková H, Shchepin O, Shirouzu T, Shiryaev A, Siepe K, Sir EB, Sohrabi M, Soop K, Spirin V, Spribille T, Stadler M, Stalpers J, Stenroos S, Suija A, Sunhede S, Svantesson S, Svensson S, Svetasheva TY, Świerkosz K, Tamm H, Taskin H, Taudière A, Tedebrand JO, Lahoz RT, Temina M, Thell A, Thines M, Thor G, Thüs H, Tibell L, Tibell S, Timdal E, Tkalčec Z, Tønsberg T, Trichies G, Triebel D, Tsurykau A, Tulloss RE, Tuovinen V, Sosa MU, Urcelay C, Valade F, Garza RV, van den Boom P, Van Vooren N, Vasco-Palacios AM, Vauras J, Velasco Santos JM, Vellinga E, Verbeken A, Vetlesen P, Vizzini A, Voglmayr H, Volobuev S, von Brackel W, Voronina E, Walther G, Watling R, Weber E, Wedin M, Weholt Ø, Westberg M, Yurchenko E, Zehnálek P, Zhang H, Zhurbenko MP, Ekman S.

IMA Fungus. 2018 Jun;9(1):167-175. doi: 10.5598/imafungus.2018.09.01.10. Epub 2018 May 24.

2.

Environment and host identity structure communities of green algal symbionts in lichens.

Dal Grande F, Rolshausen G, Divakar PK, Crespo A, Otte J, Schleuning M, Schmitt I.

New Phytol. 2018 Jan;217(1):277-289. doi: 10.1111/nph.14770. Epub 2017 Sep 11.

3.

Circumscription of the genus Lepra, a recently resurrected genus to accommodate the "Variolaria"-group of Pertusaria sensu lato (Pertusariales, Ascomycota).

Wei X, Schmitt I, Hodkinson B, Flakus A, Kukwa M, Divakar PK, Kirika PM, Otte J, Meiser A, Lumbsch HT.

PLoS One. 2017 Jul 11;12(7):e0180284. doi: 10.1371/journal.pone.0180284. eCollection 2017.

4.

A temporal banding approach for consistent taxonomic ranking above the species level.

Kraichak E, Crespo A, Divakar PK, Leavitt SD, Lumbsch HT.

Sci Rep. 2017 May 23;7(1):2297. doi: 10.1038/s41598-017-02477-7.

5.

Protective effects of lichen metabolites evernic and usnic acids against redox impairment-mediated cytotoxicity in central nervous system-like cells.

Fernández-Moriano C, Divakar PK, Crespo A, Gómez-Serranillos MP.

Food Chem Toxicol. 2017 Jul;105:262-277. doi: 10.1016/j.fct.2017.04.030. Epub 2017 Apr 24.

PMID:
28450128
6.

Panmixia and dispersal from the Mediterranean Basin to Macaronesian Islands of a macrolichen species.

Alors D, Grande FD, Cubas P, Crespo A, Schmitt I, Molina MC, Divakar PK.

Sci Rep. 2017 Jan 19;7:40879. doi: 10.1038/srep40879.

7.

In vitro neuroprotective potential of lichen metabolite fumarprotocetraric acid via intracellular redox modulation.

Fernández-Moriano C, Divakar PK, Crespo A, Gómez-Serranillos MP.

Toxicol Appl Pharmacol. 2017 Feb 1;316:83-94. doi: 10.1016/j.taap.2016.12.020. Epub 2016 Dec 29.

PMID:
28041784
8.

Fungal-algal association patterns in lichen symbiosis linked to macroclimate.

Singh G, Dal Grande F, Divakar PK, Otte J, Crespo A, Schmitt I.

New Phytol. 2017 Apr;214(1):317-329. doi: 10.1111/nph.14366. Epub 2016 Dec 5.

9.

Hidden diversity before our eyes: Delimiting and describing cryptic lichen-forming fungal species in camouflage lichens (Parmeliaceae, Ascomycota).

Leavitt SD, Esslinger TL, Divakar PK, Crespo A, Lumbsch HT.

Fungal Biol. 2016 Nov;120(11):1374-1391. doi: 10.1016/j.funbio.2016.06.001.

PMID:
27742095
10.

A Festschrift for David L. Hawksworth.

Crespo A, Crous PW, Divakar PK, Lumbsch HT.

Fungal Biol. 2016 Nov;120(11):1269-1271. doi: 10.1016/j.funbio.2016.08.003. Epub 2016 Aug 20. No abstract available.

PMID:
27742089
11.

Hidden Genetic Diversity in an Asexually Reproducing Lichen Forming Fungal Group.

Del-Prado R, Divakar PK, Lumbsch HT, Crespo AM.

PLoS One. 2016 Aug 11;11(8):e0161031. doi: 10.1371/journal.pone.0161031. eCollection 2016.

12.

An Integrative Approach for Understanding Diversity in the Punctelia rudecta Species Complex (Parmeliaceae, Ascomycota).

Alors D, Lumbsch HT, Divakar PK, Leavitt SD, Crespo A.

PLoS One. 2016 Feb 10;11(2):e0146537. doi: 10.1371/journal.pone.0146537. eCollection 2016.

13.

Evolution of complex symbiotic relationships in a morphologically derived family of lichen-forming fungi.

Divakar PK, Crespo A, Wedin M, Leavitt SD, Hawksworth DL, Myllys L, McCune B, Randlane T, Bjerke JW, Ohmura Y, Schmitt I, Boluda CG, Alors D, Roca-Valiente B, Del-Prado R, Ruibal C, Buaruang K, Núñez-Zapata J, Amo de Paz G, Rico VJ, Molina MC, Elix JA, Esslinger TL, Tronstad IK, Lindgren H, Ertz D, Gueidan C, Saag L, Mark K, Singh G, Dal Grande F, Parnmen S, Beck A, Benatti MN, Blanchon D, Candan M, Clerc P, Goward T, Grube M, Hodkinson BP, Hur JS, Kantvilas G, Kirika PM, Lendemer J, Mattsson JE, Messuti MI, Miadlikowska J, Nelsen M, Ohlson JI, Pérez-Ortega S, Saag A, Sipman HJ, Sohrabi M, Thell A, Thor G, Truong C, Yahr R, Upreti DK, Cubas P, Lumbsch HT.

New Phytol. 2015 Dec;208(4):1217-26. doi: 10.1111/nph.13553. Epub 2015 Aug 24.

14.

Neuroprotective activity and cytotoxic potential of two Parmeliaceae lichens: Identification of active compounds.

Fernández-Moriano C, Divakar PK, Crespo A, Gómez-Serranillos MP.

Phytomedicine. 2015 Aug 15;22(9):847-55. doi: 10.1016/j.phymed.2015.06.005. Epub 2015 Jun 27.

PMID:
26220632
15.

Fungal specificity and selectivity for algae play a major role in determining lichen partnerships across diverse ecogeographic regions in the lichen-forming family Parmeliaceae (Ascomycota).

Leavitt SD, Kraichak E, Nelsen MP, Altermann S, Divakar PK, Alors D, Esslinger TL, Crespo A, Lumbsch T.

Mol Ecol. 2015 Jul;24(14):3779-97. doi: 10.1111/mec.13271. Epub 2015 Jul 14.

PMID:
26073165
16.

Who's getting around? Assessing species diversity and phylogeography in the widely distributed lichen-forming fungal genus Montanelia (Parmeliaceae, Ascomycota).

Leavitt SD, Divakar PK, Ohmura Y, Wang LS, Esslinger TL, Lumbsch HT.

Mol Phylogenet Evol. 2015 Sep;90:85-96. doi: 10.1016/j.ympev.2015.04.029. Epub 2015 May 16.

PMID:
25987532
17.

A Tale of Two Hyper-diversities: Diversification dynamics of the two largest families of lichenized fungi.

Kraichak E, Divakar PK, Crespo A, Leavitt SD, Nelsen MP, Lücking R, Lumbsch HT.

Sci Rep. 2015 May 6;5:10028. doi: 10.1038/srep10028.

18.

Coalescent-based species delimitation approach uncovers high cryptic diversity in the cosmopolitan lichen-forming fungal genus Protoparmelia (Lecanorales, Ascomycota).

Singh G, Dal Grande F, Divakar PK, Otte J, Leavitt SD, Szczepanska K, Crespo A, Rico VJ, Aptroot A, Cáceres ME, Lumbsch HT, Schmitt I.

PLoS One. 2015 May 1;10(5):e0124625. doi: 10.1371/journal.pone.0124625. eCollection 2015.

19.

Characterization of fungus-specific microsatellite markers in the lichen-forming fungus Parmelina carporrhizans (Parmeliaceae).

Alors D, Dal Grande F, Schmitt I, Kraichak E, Lumbsch HT, Crespo A, Divakar PK.

Appl Plant Sci. 2014 Nov 20;2(12). pii: apps.1400081. doi: 10.3732/apps.1400081. eCollection 2014 Dec.

20.

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi.

Schoch CL, Robbertse B, Robert V, Vu D, Cardinali G, Irinyi L, Meyer W, Nilsson RH, Hughes K, Miller AN, Kirk PM, Abarenkov K, Aime MC, Ariyawansa HA, Bidartondo M, Boekhout T, Buyck B, Cai Q, Chen J, Crespo A, Crous PW, Damm U, De Beer ZW, Dentinger BT, Divakar PK, Dueñas M, Feau N, Fliegerova K, García MA, Ge ZW, Griffith GW, Groenewald JZ, Groenewald M, Grube M, Gryzenhout M, Gueidan C, Guo L, Hambleton S, Hamelin R, Hansen K, Hofstetter V, Hong SB, Houbraken J, Hyde KD, Inderbitzin P, Johnston PR, Karunarathna SC, Kõljalg U, Kovács GM, Kraichak E, Krizsan K, Kurtzman CP, Larsson KH, Leavitt S, Letcher PM, Liimatainen K, Liu JK, Lodge DJ, Luangsa-ard JJ, Lumbsch HT, Maharachchikumbura SS, Manamgoda D, Martín MP, Minnis AM, Moncalvo JM, Mulè G, Nakasone KK, Niskanen T, Olariaga I, Papp T, Petkovits T, Pino-Bodas R, Powell MJ, Raja HA, Redecker D, Sarmiento-Ramirez JM, Seifert KA, Shrestha B, Stenroos S, Stielow B, Suh SO, Tanaka K, Tedersoo L, Telleria MT, Udayanga D, Untereiner WA, Diéguez Uribeondo J, Subbarao KV, Vágvölgyi C, Visagie C, Voigt K, Walker DM, Weir BS, Weiß M, Wijayawardene NN, Wingfield MJ, Xu JP, Yang ZL, Zhang N, Zhuang WY, Federhen S.

Database (Oxford). 2014 Jun 30;2014. pii: bau061. doi: 10.1093/database/bau061. Print 2014.

21.

Non-developing ascospores in apothecia of asexually reproducing lichen-forming fungi.

Molina MC, Divakar PK, Zhang N, González N, Struwe L.

Int Microbiol. 2013 Sep;16(3):145-55.

22.

Insights into intrathalline genetic diversity of the cosmopolitan lichen symbiotic green alga Trebouxia decolorans Ahmadjian using microsatellite markers.

Dal Grande F, Alors D, Divakar PK, Bálint M, Crespo A, Schmitt I.

Mol Phylogenet Evol. 2014 Mar;72:54-60. doi: 10.1016/j.ympev.2013.12.010. Epub 2014 Jan 8.

PMID:
24412431
23.

Understanding phenotypical character evolution in parmelioid lichenized fungi (Parmeliaceae, Ascomycota).

Divakar PK, Kauff F, Crespo A, Leavitt SD, Lumbsch HT.

PLoS One. 2013 Nov 29;8(11):e83115. doi: 10.1371/journal.pone.0083115. eCollection 2013.

24.

The sister-group relationships of the largest family of lichenized fungi, Parmeliaceae (Lecanorales, Ascomycota).

Singh G, Divakar PK, Dal Grande F, Otte J, Parnmen S, Wedin M, Crespo A, Lumbsch HT, Schmitt I.

Fungal Biol. 2013 Oct;117(10):715-21. doi: 10.1016/j.funbio.2013.08.001. Epub 2013 Aug 13.

PMID:
24119410
25.

The lichen genus parmotrema in South Korea.

Jayalal U, Divakar PK, Joshi S, Oh SO, Koh YJ, Hur JS.

Mycobiology. 2013 Mar;41(1):25-36. doi: 10.5941/MYCO.2013.41.1.25. Epub 2013 Mar 28.

26.

Testing the use of ITS rDNA and protein-coding genes in the generic and species delimitation of the lichen genus Usnea (Parmeliaceae, Ascomycota).

Truong C, Divakar PK, Yahr R, Crespo A, Clerc P.

Mol Phylogenet Evol. 2013 Aug;68(2):357-72. doi: 10.1016/j.ympev.2013.04.005. Epub 2013 Apr 16.

PMID:
23603312
27.

Diversification of the newly recognized lichen-forming fungal lineage Montanelia (Parmeliaceae, Ascomycota) and its relation to key geological and climatic events.

Divakar PK, Del-Prado R, Lumbsch HT, Wedin M, Esslinger TL, Leavitt SD, Crespo A.

Am J Bot. 2012 Dec;99(12):2014-26. doi: 10.3732/ajb.1200258. Epub 2012 Nov 30.

28.

Multilocus phylogeny of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota): insights on diversity, distributions, and a comparison of species tree and concatenated topologies.

Leavitt SD, Esslinger TL, Spribille T, Divakar PK, Thorsten Lumbsch H.

Mol Phylogenet Evol. 2013 Jan;66(1):138-52. doi: 10.1016/j.ympev.2012.09.013. Epub 2012 Sep 24.

PMID:
23017822
29.

Miocene and Pliocene dominated diversification of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota) and Pleistocene population expansions.

Leavitt SD, Esslinger TL, Divakar PK, Lumbsch HT.

BMC Evol Biol. 2012 Sep 11;12:176. doi: 10.1186/1471-2148-12-176.

30.

Origin and diversification of major clades in parmelioid lichens (Parmeliaceae, Ascomycota) during the Paleogene inferred by Bayesian analysis.

Amo de Paz G, Cubas P, Divakar PK, Lumbsch HT, Crespo A.

PLoS One. 2011;6(12):e28161. doi: 10.1371/journal.pone.0028161. Epub 2011 Dec 8.

31.

Remototrachyna, a newly recognized tropical lineage of lichens in the Hypotrachyna clade (Parmeliaceae, Ascomycota), originated in the Indian subcontinent.

Divakar PK, Lumbsch HT, Ferencova Z, Del Prado R, Crespo A.

Am J Bot. 2010 Apr;97(4):579-90. doi: 10.3732/ajb.0900140. Epub 2010 Mar 9.

32.

Genetic distances within and among species in monophyletic lineages of Parmeliaceae (Ascomycota) as a tool for taxon delimitation.

Del-Prado R, Cubas P, Lumbsch HT, Divakar PK, Blanco O, de Paz GA, Molina MC, Crespo A.

Mol Phylogenet Evol. 2010 Jul;56(1):125-33. doi: 10.1016/j.ympev.2010.04.014. Epub 2010 Apr 23.

PMID:
20399873
33.

Accelerated evolutionary rates in tropical and oceanic parmelioid lichens (Ascomycota).

Lumbsch HT, Hipp AL, Divakar PK, Blanco O, Crespo A.

BMC Evol Biol. 2008 Sep 22;8:257. doi: 10.1186/1471-2148-8-257.

34.

Upper cortex anatomy corroborates phylogenetic hypothesis in species of Physconia (Ascomycota, Lecanoromycetes).

Divakar PK, Amo De Paz G, Del Prado R, Esslinger TL, Crespo A.

Mycol Res. 2007 Nov;111(Pt 11):1311-20. Epub 2007 Aug 28.

PMID:
18023166
35.

Testing morphology-based hypotheses of phylogenetic relationships in Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene.

Crespo A, Lumbsch HT, Mattsson JE, Blanco O, Divakar PK, Articus K, Wiklund E, Bawingan PA, Wedin M.

Mol Phylogenet Evol. 2007 Aug;44(2):812-24. Epub 2006 Dec 13.

PMID:
17276700
36.

Patterns of group I intron presence in nuclear SSU rDNA of the Lichen family Parmeliaceae.

Gutiérrez G, Blanco O, Divakar PK, Lumbsch HT, Crespo A.

J Mol Evol. 2007 Feb;64(2):181-95. Epub 2007 Jan 2.

PMID:
17200806
37.

Phylogenetic significance of morphological characters in the tropical Hypotrachyna clade of parmelioid lichens (Parmeliaceae, Ascomycota).

Divakar PK, Crespo A, Blanco O, Lumbsch HT.

Mol Phylogenet Evol. 2006 Aug;40(2):448-58. Epub 2006 May 2.

PMID:
16647864
38.

Molecular phylogeny of parmotremoid lichens (Ascomycota, Parmeliaceae).

Blanco O, Crespol A, Divakar PK, Elix JA, Lumbsch HT.

Mycologia. 2005 Jan-Feb;97(1):150-9.

PMID:
16389966
39.

Melanelixia and Melanohalea, two new genera segregated from Melanelia (Parmeliaceae) based on molecular and morphological data.

Blanco O, Crespo A, Divakar PK, Esslinger TL, Hawksworth DL, Lumbsch HT.

Mycol Res. 2004 Aug;108(Pt 8):873-84.

PMID:
15449592

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