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Items: 41

1.

Intrinsic elasticity of nucleosomes is encoded by histone variants and calibrated by their binding partners.

Melters DP, Pitman M, Rakshit T, Dimitriadis EK, Bui M, Papoian GA, Dalal Y.

Proc Natl Acad Sci U S A. 2019 Nov 11. pii: 201911880. doi: 10.1073/pnas.1911880116. [Epub ahead of print]

2.

Durotaxis by Human Cancer Cells.

DuChez BJ, Doyle AD, Dimitriadis EK, Yamada KM.

Biophys J. 2019 Feb 19;116(4):670-683. doi: 10.1016/j.bpj.2019.01.009. Epub 2019 Jan 12.

PMID:
30709621
3.

Membrane-associated human tyrosinase is an enzymatically active monomeric glycoprotein.

Kus NJ, Dolinska MB, Young KL 2nd, Dimitriadis EK, Wingfield PT, Sergeev YV.

PLoS One. 2018 Jun 5;13(6):e0198247. doi: 10.1371/journal.pone.0198247. eCollection 2018.

4.

Macrophages Shed Excess Cholesterol in Unique Extracellular Structures Containing Cholesterol Microdomains.

Jin X, Dimitriadis EK, Liu Y, Combs CA, Chang J, Varsano N, Stempinski E, Flores R, Jackson SN, Muller L, Woods AS, Addadi L, Kruth HS.

Arterioscler Thromb Vasc Biol. 2018 Jul;38(7):1504-1518. doi: 10.1161/ATVBAHA.118.311269. Epub 2018 May 31.

5.

Microscale mapping of extracellular matrix elasticity of mouse joint cartilage: an approach to extracting bulk elasticity of soft matter with surface roughness.

Chandran PL, Dimitriadis EK, Mertz EL, Horkay F.

Soft Matter. 2018 Apr 18;14(15):2879-2892. doi: 10.1039/c7sm02045g.

6.

Supramolecular Self-assembly of a Model Hydrogelator: Characterization of Fiber Formation and Morphology.

Gao Y, Nieuwendaal R, Dimitriadis EK, Hammouda B, Douglas JF, Xu B, Horkay F.

Gels. 2016 Dec;2(4). pii: 27. doi: 10.3390/gels2040027. Epub 2016 Oct 8.

7.

HIV Tat protein and amyloid-β peptide form multifibrillar structures that cause neurotoxicity.

Hategan A, Bianchet MA, Steiner J, Karnaukhova E, Masliah E, Fields A, Lee MH, Dickens AM, Haughey N, Dimitriadis EK, Nath A.

Nat Struct Mol Biol. 2017 Apr;24(4):379-386. doi: 10.1038/nsmb.3379. Epub 2017 Feb 20.

8.

"DNA Binding Region" of BRCA1 Affects Genetic Stability through modulating the Intra-S-Phase Checkpoint.

Masuda T, Xu X, Dimitriadis EK, Lahusen T, Deng CX.

Int J Biol Sci. 2016 Jan 1;12(2):133-43. doi: 10.7150/ijbs.14242. eCollection 2016.

9.

A New Noncoding RNA Arranges Bacterial Chromosome Organization.

Qian Z, Macvanin M, Dimitriadis EK, He X, Zhurkin V, Adhya S.

MBio. 2015 Aug 25;6(4). pii: e00998-15. doi: 10.1128/mBio.00998-15.

10.

Dense fibrillar collagen is a potent inducer of invadopodia via a specific signaling network.

Artym VV, Swatkoski S, Matsumoto K, Campbell CB, Petrie RJ, Dimitriadis EK, Li X, Mueller SC, Bugge TH, Gucek M, Yamada KM.

J Cell Biol. 2015 Feb 2;208(3):331-50. doi: 10.1083/jcb.201405099.

11.

Chromatin decompaction by the nucleosomal binding protein HMGN5 impairs nuclear sturdiness.

Furusawa T, Rochman M, Taher L, Dimitriadis EK, Nagashima K, Anderson S, Bustin M.

Nat Commun. 2015 Jan 22;6:6138. doi: 10.1038/ncomms7138.

12.

DNA nanoparticles with core-shell morphology.

Chandran PL, Dimitriadis EK, Lisziewicz J, Speransky V, Horkay F.

Soft Matter. 2014 Oct 14;10(38):7653-60. doi: 10.1039/c4sm00908h. Epub 2014 Aug 19.

13.

CENP-A octamers do not confer a reduction in nucleosome height by AFM.

Walkiewicz MP, Dimitriadis EK, Dalal Y.

Nat Struct Mol Biol. 2014 Jan;21(1):2-3. doi: 10.1038/nsmb.2742. No abstract available.

14.

Production and characterization of novel recombinant adeno-associated virus replicative-form genomes: a eukaryotic source of DNA for gene transfer.

Li L, Dimitriadis EK, Yang Y, Li J, Yuan Z, Qiao C, Beley C, Smith RH, Garcia L, Kotin RM.

PLoS One. 2013 Aug 1;8(8):e69879. doi: 10.1371/journal.pone.0069879. Print 2013.

15.

The CENP-A nucleosome: a battle between Dr Jekyll and Mr Hyde.

Bui M, Walkiewicz MP, Dimitriadis EK, Dalal Y.

Nucleus. 2013 Jan-Feb;4(1):37-42. doi: 10.4161/nucl.23588. Epub 2013 Jan 1. Review.

16.

Cell-cycle-dependent structural transitions in the human CENP-A nucleosome in vivo.

Bui M, Dimitriadis EK, Hoischen C, An E, Quénet D, Giebe S, Nita-Lazar A, Diekmann S, Dalal Y.

Cell. 2012 Jul 20;150(2):317-26. doi: 10.1016/j.cell.2012.05.035.

17.

The linker of the interferon response factor 3 transcription factor is not unfolded.

Shukla H, Vaitiekunas P, Majumdar AK, Dragan AI, Dimitriadis EK, Kotova S, Crane-Robinson C, Privalov PL.

Biochemistry. 2012 Aug 14;51(32):6320-7. Epub 2012 Aug 2.

PMID:
22812703
18.

Galactose repressor mediated intersegmental chromosomal connections in Escherichia coli.

Qian Z, Dimitriadis EK, Edgar R, Eswaramoorthy P, Adhya S.

Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11336-41. doi: 10.1073/pnas.1208595109. Epub 2012 Jun 25.

19.

Probing Interactions between Aggrecan and Mica Surface by the Atomic Force Microscopy.

Chandran PL, Dimitriadis EK, Basser PJ, Horkay F.

J Polym Sci B Polym Phys. 2010 Dec 15;48(24):2575-2581.

20.

Tetrameric organization of vertebrate centromeric nucleosomes.

Dimitriadis EK, Weber C, Gill RK, Diekmann S, Dalal Y.

Proc Natl Acad Sci U S A. 2010 Nov 23;107(47):20317-22. doi: 10.1073/pnas.1009563107. Epub 2010 Nov 8.

21.

Retinoschisin (RS1) interacts with negatively charged lipid bilayers in the presence of Ca2+: an atomic force microscopy study.

Kotova S, Vijayasarathy C, Dimitriadis EK, Ikonomou L, Jaffe H, Sieving PA.

Biochemistry. 2010 Aug 24;49(33):7023-32. doi: 10.1021/bi1007029.

22.

Nucleoprotein intermediates in HIV-1 DNA integration visualized by atomic force microscopy.

Kotova S, Li M, Dimitriadis EK, Craigie R.

J Mol Biol. 2010 Jun 11;399(3):491-500. doi: 10.1016/j.jmb.2010.04.026. Epub 2010 Apr 21.

23.

Organization of membrane motor in outer hair cells: an atomic force microscopic study.

Sinha GP, Sabri F, Dimitriadis EK, Iwasa KH.

Pflugers Arch. 2010 Feb;459(3):427-39. doi: 10.1007/s00424-009-0742-3. Epub 2009 Oct 7.

24.

Initial stages of V(D)J recombination: the organization of RAG1/2 and RSS DNA in the postcleavage complex.

Grundy GJ, Ramón-Maiques S, Dimitriadis EK, Kotova S, Biertümpfel C, Heymann JB, Steven AC, Gellert M, Yang W.

Mol Cell. 2009 Jul 31;35(2):217-27. doi: 10.1016/j.molcel.2009.06.022.

25.

Spherical indentation of soft matter beyond the Hertzian regime: numerical and experimental validation of hyperelastic models.

Lin DC, Shreiber DI, Dimitriadis EK, Horkay F.

Biomech Model Mechanobiol. 2009 Oct;8(5):345-58. doi: 10.1007/s10237-008-0139-9. Epub 2008 Nov 2.

26.

The influence of cochlear shape on low-frequency hearing.

Manoussaki D, Chadwick RS, Ketten DR, Arruda J, Dimitriadis EK, O'Malley JT.

Proc Natl Acad Sci U S A. 2008 Apr 22;105(16):6162-6. doi: 10.1073/pnas.0710037105. Epub 2008 Apr 14.

27.

A type I collagen defect leads to rapidly progressive osteoarthritis in a mouse model.

Blair-Levy JM, Watts CE, Fiorentino NM, Dimitriadis EK, Marini JC, Lipsky PE.

Arthritis Rheum. 2008 Apr;58(4):1096-106. doi: 10.1002/art.23277. Erratum in: Arthritis Rheum. 2008 Jun;58(6):1888. Fiorientino, N M [corrected to Fiorentino, N M].

28.
29.
30.

Right-handed DNA supercoiling by an octameric form of histone-like protein HU: modulation of cellular transcription.

Kar S, Choi EJ, Guo F, Dimitriadis EK, Kotova SL, Adhya S.

J Biol Chem. 2006 Dec 29;281(52):40144-53. Epub 2006 Oct 23.

31.

Cochlea's graded curvature effect on low frequency waves.

Manoussaki D, Dimitriadis EK, Chadwick RS.

Phys Rev Lett. 2006 Mar 3;96(8):088701. Epub 2006 Mar 2.

PMID:
16606236
32.

Gal repressor-operator-HU ternary complex: pathway of repressosome formation.

Roy S, Dimitriadis EK, Kar S, Geanacopoulos M, Lewis MS, Adhya S.

Biochemistry. 2005 Apr 12;44(14):5373-80.

PMID:
15807530
33.

Evidence and implications of inhomogeneity in tectorial membrane elasticity.

Shoelson B, Dimitriadis EK, Cai H, Kachar B, Chadwick RS.

Biophys J. 2004 Oct;87(4):2768-77.

34.

Cytochrome c adsorption to supported, anionic lipid bilayers studied via atomic force microscopy.

Choi EJ, Dimitriadis EK.

Biophys J. 2004 Nov;87(5):3234-41. Epub 2004 Sep 3.

35.

Determination of elastic moduli of thin layers of soft material using the atomic force microscope.

Dimitriadis EK, Horkay F, Maresca J, Kachar B, Chadwick RS.

Biophys J. 2002 May;82(5):2798-810.

36.

Optimal data analysis using transmitted light intensities in analytical ultracentrifuge.

Dimitriadis EK, Lewis MS.

Methods Enzymol. 2000;321:121-36. No abstract available.

PMID:
10909054
37.

Domain specific interaction in the XRCC1-DNA polymerase beta complex.

Marintchev A, Robertson A, Dimitriadis EK, Prasad R, Wilson SH, Mullen GP.

Nucleic Acids Res. 2000 May 15;28(10):2049-59.

38.

Solution of the inverse problem for a linear cochlear model: a tonotopic cochlear amplifier.

Dimitriadis EK, Chadwick RS.

J Acoust Soc Am. 1999 Oct;106(4 Pt 1):1880-92.

PMID:
10530013
39.
40.

Thermodynamics of human DNA ligase I trimerization and association with DNA polymerase beta.

Dimitriadis EK, Prasad R, Vaske MK, Chen L, Tomkinson AE, Lewis MS, Wilson SH.

J Biol Chem. 1998 Aug 7;273(32):20540-50.

41.

Active control of waves in a cochlear model with subpartitions.

Chadwick RS, Dimitriadis EK, Iwasa KH.

Proc Natl Acad Sci U S A. 1996 Mar 19;93(6):2564-9.

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