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Items: 28

1.

The type VI secretion system deploys antifungal effectors against microbial competitors.

Trunk K, Peltier J, Liu YC, Dill BD, Walker L, Gow NAR, Stark MJR, Quinn J, Strahl H, Trost M, Coulthurst SJ.

Nat Microbiol. 2018 Aug;3(8):920-931. doi: 10.1038/s41564-018-0191-x. Epub 2018 Jul 23.

PMID:
30038307
2.

LRRK2 is a negative regulator of Mycobacterium tuberculosis phagosome maturation in macrophages.

Härtlova A, Herbst S, Peltier J, Rodgers A, Bilkei-Gorzo O, Fearns A, Dill BD, Lee H, Flynn R, Cowley SA, Davies P, Lewis PA, Ganley IG, Martinez J, Alessi DR, Reith AD, Trost M, Gutierrez MG.

EMBO J. 2018 Jun 15;37(12). pii: e98694. doi: 10.15252/embj.201798694. Epub 2018 May 22.

3.

Translation from unconventional 5' start sites drives tumour initiation.

Sendoel A, Dunn JG, Rodriguez EH, Naik S, Gomez NC, Hurwitz B, Levorse J, Dill BD, Schramek D, Molina H, Weissman JS, Fuchs E.

Nature. 2017 Jan 26;541(7638):494-499. doi: 10.1038/nature21036. Epub 2017 Jan 11.

4.

High-Titer Rheumatoid Arthritis Antibodies Preferentially Bind Fibrinogen Citrullinated by Peptidylarginine Deiminase 4.

Blachère NE, Parveen S, Frank MO, Dill BD, Molina H, Orange DE.

Arthritis Rheumatol. 2017 May;69(5):986-995. doi: 10.1002/art.40035.

5.

Dissociation of muscle insulin sensitivity from exercise endurance in mice by HDAC3 depletion.

Hong S, Zhou W, Fang B, Lu W, Loro E, Damle M, Ding G, Jager J, Zhang S, Zhang Y, Feng D, Chu Q, Dill BD, Molina H, Khurana TS, Rabinowitz JD, Lazar MA, Sun Z.

Nat Med. 2017 Feb;23(2):223-234. doi: 10.1038/nm.4245. Epub 2016 Dec 19.

6.

Chromatin Kinases Act on Transcription Factors and Histone Tails in Regulation of Inducible Transcription.

Josefowicz SZ, Shimada M, Armache A, Li CH, Miller RM, Lin S, Yang A, Dill BD, Molina H, Park HS, Garcia BA, Taunton J, Roeder RG, Allis CD.

Mol Cell. 2016 Oct 20;64(2):347-361. doi: 10.1016/j.molcel.2016.09.026.

7.

Current Proteomic Methods to Investigate the Dynamics of Histone Turnover in the Central Nervous System.

Farrelly LA, Dill BD, Molina H, Birtwistle MR, Maze I.

Methods Enzymol. 2016;574:331-354. doi: 10.1016/bs.mie.2016.01.013. Epub 2016 Feb 16.

8.

Modulated Expression of Specific tRNAs Drives Gene Expression and Cancer Progression.

Goodarzi H, Nguyen HCB, Zhang S, Dill BD, Molina H, Tavazoie SF.

Cell. 2016 Jun 2;165(6):1416-1427. doi: 10.1016/j.cell.2016.05.046.

9.

IFNs Modify the Proteome of Legionella-Containing Vacuoles and Restrict Infection Via IRG1-Derived Itaconic Acid.

Naujoks J, Tabeling C, Dill BD, Hoffmann C, Brown AS, Kunze M, Kempa S, Peter A, Mollenkopf HJ, Dorhoi A, Kershaw O, Gruber AD, Sander LE, Witzenrath M, Herold S, Nerlich A, Hocke AC, van Driel I, Suttorp N, Bedoui S, Hilbi H, Trost M, Opitz B.

PLoS Pathog. 2016 Feb 1;12(2):e1005408. doi: 10.1371/journal.ppat.1005408. eCollection 2016 Feb.

10.

Transcriptomic characterization of fibrolamellar hepatocellular carcinoma.

Simon EP, Freije CA, Farber BA, Lalazar G, Darcy DG, Honeyman JN, Chiaroni-Clarke R, Dill BD, Molina H, Bhanot UK, La Quaglia MP, Rosenberg BR, Simon SM.

Proc Natl Acad Sci U S A. 2015 Nov 3;112(44):E5916-25. doi: 10.1073/pnas.1424894112. Epub 2015 Oct 21.

11.

Stage-specific assembly events of the 6-MDa small-subunit processome initiate eukaryotic ribosome biogenesis.

Chaker-Margot M, Hunziker M, Barandun J, Dill BD, Klinge S.

Nat Struct Mol Biol. 2015 Nov;22(11):920-3. doi: 10.1038/nsmb.3111. Epub 2015 Oct 19.

PMID:
26479197
12.

Phosphoproteomic screening identifies Rab GTPases as novel downstream targets of PINK1.

Lai YC, Kondapalli C, Lehneck R, Procter JB, Dill BD, Woodroof HI, Gourlay R, Peggie M, Macartney TJ, Corti O, Corvol JC, Campbell DG, Itzen A, Trost M, Muqit MM.

EMBO J. 2015 Nov 12;34(22):2840-61. doi: 10.15252/embj.201591593. Epub 2015 Oct 15.

13.

Quantitative proteome analysis of temporally resolved phagosomes following uptake via key phagocytic receptors.

Dill BD, Gierlinski M, Härtlova A, Arandilla AG, Guo M, Clarke RG, Trost M.

Mol Cell Proteomics. 2015 May;14(5):1334-49. doi: 10.1074/mcp.M114.044594. Epub 2015 Mar 9.

14.

High-resolution quantitative proteome analysis reveals substantial differences between phagosomes of RAW 264.7 and bone marrow derived macrophages.

Guo M, Härtlova A, Dill BD, Prescott AR, Gierliński M, Trost M.

Proteomics. 2015 Sep;15(18):3169-74. doi: 10.1002/pmic.201400431. Epub 2015 Feb 5.

15.

A crucial role for β2 integrins in podosome formation, dynamics and Toll-like-receptor-signaled disassembly in dendritic cells.

Gawden-Bone C, West MA, Morrison VL, Edgar AJ, McMillan SJ, Dill BD, Trost M, Prescott A, Fagerholm SC, Watts C.

J Cell Sci. 2014 Oct 1;127(Pt 19):4213-24. doi: 10.1242/jcs.151167. Epub 2014 Aug 1.

16.

Nutrients drive transcriptional changes that maintain metabolic homeostasis but alter genome architecture in Microcystis.

Steffen MM, Dearth SP, Dill BD, Li Z, Larsen KM, Campagna SR, Wilhelm SW.

ISME J. 2014 Oct;8(10):2080-92. doi: 10.1038/ismej.2014.78. Epub 2014 May 23. Erratum in: ISME J. 2014 Oct;8(10):2152.

17.

Coupling a detergent lysis/cleanup methodology with intact protein fractionation for enhanced proteome characterization.

Sharma R, Dill BD, Chourey K, Shah M, VerBerkmoes NC, Hettich RL.

J Proteome Res. 2012 Dec 7;11(12):6008-18. doi: 10.1021/pr300709k. Epub 2012 Nov 19.

PMID:
23126408
18.

Phage-induced expression of CRISPR-associated proteins is revealed by shotgun proteomics in Streptococcus thermophilus.

Young JC, Dill BD, Pan C, Hettich RL, Banfield JF, Shah M, Fremaux C, Horvath P, Barrangou R, Verberkmoes NC.

PLoS One. 2012;7(5):e38077. doi: 10.1371/journal.pone.0038077. Epub 2012 May 30.

19.

Quantitative proteomics reveals that only a subset of the endoplasmic reticulum contributes to the phagosome.

Campbell-Valois FX, Trost M, Chemali M, Dill BD, Laplante A, Duclos S, Sadeghi S, Rondeau C, Morrow IC, Bell C, Gagnon E, Hatsuzawa K, Thibault P, Desjardins M.

Mol Cell Proteomics. 2012 Jul;11(7):M111.016378. doi: 10.1074/mcp.M111.016378. Epub 2012 Mar 15.

20.

Global transcriptomic and proteomic responses of Dehalococcoides ethenogenes strain 195 to fixed nitrogen limitation.

Lee PK, Dill BD, Louie TS, Shah M, Verberkmoes NC, Andersen GL, Zinder SH, Alvarez-Cohen L.

Appl Environ Microbiol. 2012 Mar;78(5):1424-36. doi: 10.1128/AEM.06792-11. Epub 2011 Dec 16.

21.

Identification of biofilm matrix-associated proteins from an acid mine drainage microbial community.

Jiao Y, D'haeseleer P, Dill BD, Shah M, Verberkmoes NC, Hettich RL, Banfield JF, Thelen MP.

Appl Environ Microbiol. 2011 Aug;77(15):5230-7. doi: 10.1128/AEM.03005-10. Epub 2011 Jun 17.

22.

The multifaceted role of oestrogen in enhancing Chlamydia trachomatis infection in polarized human endometrial epithelial cells.

Hall JV, Schell M, Dessus-Babus S, Moore CG, Whittimore JD, Sal M, Dill BD, Wyrick PB.

Cell Microbiol. 2011 Aug;13(8):1183-99. doi: 10.1111/j.1462-5822.2011.01608.x. Epub 2011 May 25.

PMID:
21615662
23.

Proteome changes in the initial bacterial colonist during ecological succession in an acid mine drainage biofilm community.

Mueller RS, Dill BD, Pan C, Belnap CP, Thomas BC, VerBerkmoes NC, Hettich RL, Banfield JF.

Environ Microbiol. 2011 Aug;13(8):2279-92. doi: 10.1111/j.1462-2920.2011.02486.x. Epub 2011 Apr 25.

PMID:
21518216
24.

Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics.

Gobler CJ, Berry DL, Dyhrman ST, Wilhelm SW, Salamov A, Lobanov AV, Zhang Y, Collier JL, Wurch LL, Kustka AB, Dill BD, Shah M, VerBerkmoes NC, Kuo A, Terry A, Pangilinan J, Lindquist EA, Lucas S, Paulsen IT, Hattenrath-Lehmann TK, Talmage SC, Walker EA, Koch F, Burson AM, Marcoval MA, Tang YZ, Lecleir GR, Coyne KJ, Berg GM, Bertrand EM, Saito MA, Gladyshev VN, Grigoriev IV.

Proc Natl Acad Sci U S A. 2011 Mar 15;108(11):4352-7. doi: 10.1073/pnas.1016106108. Epub 2011 Feb 23.

25.

Enigmatic, ultrasmall, uncultivated Archaea.

Baker BJ, Comolli LR, Dick GJ, Hauser LJ, Hyatt D, Dill BD, Land ML, Verberkmoes NC, Hettich RL, Banfield JF.

Proc Natl Acad Sci U S A. 2010 May 11;107(19):8806-11. doi: 10.1073/pnas.0914470107. Epub 2010 Apr 26.

26.

Identification of iron-responsive proteins expressed by Chlamydia trachomatis reticulate bodies during intracellular growth.

Dill BD, Dessus-Babus S, Raulston JE.

Microbiology. 2009 Jan;155(Pt 1):210-9. doi: 10.1099/mic.0.022731-0.

PMID:
19118361
27.
28.

Chlamydial Hsp60-2 is iron responsive in Chlamydia trachomatis serovar E-infected human endometrial epithelial cells in vitro.

LaRue RW, Dill BD, Giles DK, Whittimore JD, Raulston JE.

Infect Immun. 2007 May;75(5):2374-80. Epub 2007 Feb 16.

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