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Items: 1 to 50 of 52

1.

A Very Oil Yellow1 Modifier of the Oil Yellow1-N1989 Allele Uncovers a Cryptic Phenotypic Impact of Cis-regulatory Variation in Maize.

Khangura RS, Marla S, Venkata BP, Heller NJ, Johal GS, Dilkes BP.

G3 (Bethesda). 2019 Feb 7;9(2):375-390. doi: 10.1534/g3.118.200798.

2.

Integrating Coexpression Networks with GWAS to Prioritize Causal Genes in Maize.

Schaefer RJ, Michno JM, Jeffers J, Hoekenga O, Dilkes B, Baxter I, Myers CL.

Plant Cell. 2018 Dec;30(12):2922-2942. doi: 10.1105/tpc.18.00299. Epub 2018 Nov 9.

3.

Adult plant resistance in maize to northern leaf spot is a feature of partial loss-of-function alleles of Hm1.

Marla SR, Chu K, Chintamanani S, Multani DS, Klempien A, DeLeon A, Bong-Suk K, Dunkle LD, Dilkes BP, Johal GS.

PLoS Pathog. 2018 Oct 17;14(10):e1007356. doi: 10.1371/journal.ppat.1007356. eCollection 2018 Oct.

4.

Propagation of cell death in dropdead1, a sorghum ortholog of the maize lls1 mutant.

Sindhu A, Janick-Buckner D, Buckner B, Gray J, Zehr U, Dilkes BP, Johal GS.

PLoS One. 2018 Sep 10;13(9):e0201359. doi: 10.1371/journal.pone.0201359. eCollection 2018.

5.

Whole-Genome Sequence Accuracy Is Improved by Replication in a Population of Mutagenized Sorghum.

Addo-Quaye C, Tuinstra M, Carraro N, Weil C, Dilkes BP.

G3 (Bethesda). 2018 Mar 2;8(3):1079-1094. doi: 10.1534/g3.117.300301.

6.

Brassinosteroids Modulate Meristem Fate and Differentiation of Unique Inflorescence Morphology in Setaria viridis.

Yang J, Thames S, Best NB, Jiang H, Huang P, Dilkes BP, Eveland AL.

Plant Cell. 2018 Jan;30(1):48-66. doi: 10.1105/tpc.17.00816. Epub 2017 Dec 20.

7.

Mediator Complex Subunits MED2, MED5, MED16, and MED23 Genetically Interact in the Regulation of Phenylpropanoid Biosynthesis.

Dolan WL, Dilkes BP, Stout JM, Bonawitz ND, Chapple C.

Plant Cell. 2017 Dec;29(12):3269-3285. doi: 10.1105/tpc.17.00282. Epub 2017 Dec 4.

8.

Forward Genetics by Sequencing EMS Variation-Induced Inbred Lines.

Addo-Quaye C, Buescher E, Best N, Chaikam V, Baxter I, Dilkes BP.

G3 (Bethesda). 2017 Feb 9;7(2):413-425. doi: 10.1534/g3.116.029660.

9.

A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation.

Duan CG, Wang X, Xie S, Pan L, Miki D, Tang K, Hsu CC, Lei M, Zhong Y, Hou YJ, Wang Z, Zhang Z, Mangrauthia SK, Xu H, Zhang H, Dilkes B, Tao WA, Zhu JK.

Cell Res. 2017 Feb;27(2):226-240. doi: 10.1038/cr.2016.147. Epub 2016 Dec 9.

10.

The Interaction of Genotype and Environment Determines Variation in the Maize Kernel Ionome.

Asaro A, Ziegler G, Ziyomo C, Hoekenga OA, Dilkes BP, Baxter I.

G3 (Bethesda). 2016 Dec 7;6(12):4175-4183. doi: 10.1534/g3.116.034827.

11.

Nuclear Localised MORE SULPHUR ACCUMULATION1 Epigenetically Regulates Sulphur Homeostasis in Arabidopsis thaliana.

Huang XY, Chao DY, Koprivova A, Danku J, Wirtz M, Müller S, Sandoval FJ, Bauwe H, Roje S, Dilkes B, Hell R, Kopriva S, Salt DE.

PLoS Genet. 2016 Sep 13;12(9):e1006298. doi: 10.1371/journal.pgen.1006298. eCollection 2016 Sep.

12.

Re-Evaluation of Reportedly Metal Tolerant Arabidopsis thaliana Accessions.

Silva-Guzman M, Addo-Quaye C, Dilkes BP.

PLoS One. 2016 Jul 28;11(7):e0130679. doi: 10.1371/journal.pone.0130679. eCollection 2016.

13.

Maternal Gametophyte Effects on Seed Development in Maize.

Chettoor AM, Phillips AR, Coker CT, Dilkes B, Evans MM.

Genetics. 2016 Sep;204(1):233-48. doi: 10.1534/genetics.116.191833. Epub 2016 Jul 27.

14.

nana plant2 Encodes a Maize Ortholog of the Arabidopsis Brassinosteroid Biosynthesis Gene DWARF1, Identifying Developmental Interactions between Brassinosteroids and Gibberellins.

Best NB, Hartwig T, Budka J, Fujioka S, Johal G, Schulz B, Dilkes BP.

Plant Physiol. 2016 Aug;171(4):2633-47. doi: 10.1104/pp.16.00399. Epub 2016 Jun 10.

15.

Cross-Talk Between Sporophyte and Gametophyte Generations Is Promoted by CHD3 Chromatin Remodelers in Arabidopsis thaliana.

Carter B, Henderson JT, Svedin E, Fiers M, McCarthy K, Smith A, Guo C, Bishop B, Zhang H, Riksen T, Shockley A, Dilkes BP, Boutilier K, Ogas J.

Genetics. 2016 Jun;203(2):817-29. doi: 10.1534/genetics.115.180141. Epub 2016 Apr 13.

16.

Integration of Experiments across Diverse Environments Identifies the Genetic Determinants of Variation in Sorghum bicolor Seed Element Composition.

Shakoor N, Ziegler G, Dilkes BP, Brenton Z, Boyles R, Connolly EL, Kresovich S, Baxter I.

Plant Physiol. 2016 Apr;170(4):1989-98. doi: 10.1104/pp.15.01971. Epub 2016 Feb 19.

17.

Discovery of a novel amino acid racemase through exploration of natural variation in Arabidopsis thaliana.

Strauch RC, Svedin E, Dilkes B, Chapple C, Li X.

Proc Natl Acad Sci U S A. 2015 Sep 15;112(37):11726-31. doi: 10.1073/pnas.1503272112. Epub 2015 Aug 31.

18.

Natural variation at sympathy for the ligule controls penetrance of the semidominant Liguleless narrow-R mutation in Zea mays.

Buescher EM, Moon J, Runkel A, Hake S, Dilkes BP.

G3 (Bethesda). 2014 Oct 24;4(12):2297-306. doi: 10.1534/g3.114.014183.

19.

Arabidopsis gulliver1/SUPERROOT2-7 identifies a metabolic basis for auxin and brassinosteroid synergy.

Maharjan PM, Dilkes BP, Fujioka S, Pěnčík A, Ljung K, Burow M, Halkier BA, Choe S.

Plant J. 2014 Dec;80(5):797-808. doi: 10.1111/tpj.12678.

20.

Variation in sulfur and selenium accumulation is controlled by naturally occurring isoforms of the key sulfur assimilation enzyme ADENOSINE 5'-PHOSPHOSULFATE REDUCTASE2 across the Arabidopsis species range.

Chao DY, Baraniecka P, Danku J, Koprivova A, Lahner B, Luo H, Yakubova E, Dilkes B, Kopriva S, Salt DE.

Plant Physiol. 2014 Nov;166(3):1593-608. doi: 10.1104/pp.114.247825. Epub 2014 Sep 22.

21.

Exploiting natural variation of secondary metabolism identifies a gene controlling the glycosylation diversity of dihydroxybenzoic acids in Arabidopsis thaliana.

Li X, Svedin E, Mo H, Atwell S, Dilkes BP, Chapple C.

Genetics. 2014 Nov;198(3):1267-76. doi: 10.1534/genetics.114.168690. Epub 2014 Aug 29.

22.

The BOY NAMED SUE quantitative trait locus confers increased meiotic stability to an adapted natural allopolyploid of Arabidopsis.

Henry IM, Dilkes BP, Tyagi A, Gao J, Christensen B, Comai L.

Plant Cell. 2014 Jan;26(1):181-94. doi: 10.1105/tpc.113.120626. Epub 2014 Jan 24.

23.

Brassinosteroids regulate plant growth through distinct signaling pathways in Selaginella and Arabidopsis.

Cheon J, Fujioka S, Dilkes BP, Choe S.

PLoS One. 2013 Dec 13;8(12):e81938. doi: 10.1371/journal.pone.0081938. eCollection 2013.

24.

Early disruption of maternal-zygotic interaction and activation of defense-like responses in Arabidopsis interspecific crosses.

Burkart-Waco D, Ngo K, Dilkes B, Josefsson C, Comai L.

Plant Cell. 2013 Jun;25(6):2037-55. doi: 10.1105/tpc.112.108258. Epub 2013 Jun 28.

25.

Forward genetics by genome sequencing reveals that rapid cyanide release deters insect herbivory of Sorghum bicolor.

Krothapalli K, Buescher EM, Li X, Brown E, Chapple C, Dilkes BP, Tuinstra MR.

Genetics. 2013 Oct;195(2):309-18. doi: 10.1534/genetics.113.149567. Epub 2013 Jul 26.

26.

Polyploids exhibit higher potassium uptake and salinity tolerance in Arabidopsis.

Chao DY, Dilkes B, Luo H, Douglas A, Yakubova E, Lahner B, Salt DE.

Science. 2013 Aug 9;341(6146):658-9. doi: 10.1126/science.1240561. Epub 2013 Jul 25.

27.

Cephalopod genomics: A plan of strategies and organization.

Albertin CB, Bonnaud L, Brown CT, Crookes-Goodson WJ, da Fonseca RR, Di Cristo C, Dilkes BP, Edsinger-Gonzales E, Freeman RM Jr, Hanlon RT, Koenig KM, Lindgren AR, Martindale MQ, Minx P, Moroz LL, Nödl MT, Nyholm SV, Ogura A, Pungor JR, Rosenthal JJ, Schwarz EM, Shigeno S, Strugnell JM, Wollesen T, Zhang G, Ragsdale CW.

Stand Genomic Sci. 2012 Oct 10;7(1):175-88. doi: 10.4056/sigs.3136559. Epub 2012 Sep 26.

28.

Genetic adaptation associated with genome-doubling in autotetraploid Arabidopsis arenosa.

Hollister JD, Arnold BJ, Svedin E, Xue KS, Dilkes BP, Bomblies K.

PLoS Genet. 2012;8(12):e1003093. doi: 10.1371/journal.pgen.1003093. Epub 2012 Dec 20.

29.

Elemental profiles reflect plant adaptations to the environment.

Baxter I, Dilkes BP.

Science. 2012 Jun 29;336(6089):1661-3. doi: 10.1126/science.1219992.

PMID:
22745418
30.

Hybrid incompatibility in Arabidopsis is determined by a multiple-locus genetic network.

Burkart-Waco D, Josefsson C, Dilkes B, Kozloff N, Torjek O, Meyer R, Altmann T, Comai L.

Plant Physiol. 2012 Feb;158(2):801-12. doi: 10.1104/pp.111.188706. Epub 2011 Dec 1.

31.

An assessment of transgenomics as a tool for identifying genes involved in the evolutionary differentiation of closely related plant species.

Correa R, Stanga J, Larget B, Roznowski A, Shu G, Dilkes B, Baum DA.

New Phytol. 2012 Jan;193(2):494-503. doi: 10.1111/j.1469-8137.2011.03949.x. Epub 2011 Nov 11.

32.

Homoeolog-specific retention and use in allotetraploid Arabidopsis suecica depends on parent of origin and network partners.

Chang PL, Dilkes BP, McMahon M, Comai L, Nuzhdin SV.

Genome Biol. 2010;11(12):R125. doi: 10.1186/gb-2010-11-12-r125. Epub 2010 Dec 23.

33.

Phenotypic consequences of aneuploidy in Arabidopsis thaliana.

Henry IM, Dilkes BP, Miller ES, Burkart-Waco D, Comai L.

Genetics. 2010 Dec;186(4):1231-45. doi: 10.1534/genetics.110.121079. Epub 2010 Sep 27.

34.

Differential sensitivity of the Arabidopsis thaliana transcriptome and enhancers to the effects of genome doubling.

Pignatta D, Dilkes BP, Yoo SY, Henry IM, Madlung A, Doerge RW, Jeffrey Chen Z, Comai L.

New Phytol. 2010 Apr;186(1):194-206. doi: 10.1111/j.1469-8137.2010.03198.x.

35.

Dosage and parent-of-origin effects shaping aneuploid swarms in A. thaliana.

Henry IM, Dilkes BP, Tyagi AP, Lin HY, Comai L.

Heredity (Edinb). 2009 Dec;103(6):458-68. doi: 10.1038/hdy.2009.81. Epub 2009 Jul 15.

36.

Dosage-dependent deregulation of an AGAMOUS-LIKE gene cluster contributes to interspecific incompatibility.

Walia H, Josefsson C, Dilkes B, Kirkbride R, Harada J, Comai L.

Curr Biol. 2009 Jul 14;19(13):1128-32. doi: 10.1016/j.cub.2009.05.068. Epub 2009 Jun 25.

37.

The maternally expressed WRKY transcription factor TTG2 controls lethality in interploidy crosses of Arabidopsis.

Dilkes BP, Spielman M, Weizbauer R, Watson B, Burkart-Waco D, Scott RJ, Comai L.

PLoS Biol. 2008 Dec 9;6(12):2707-20. doi: 10.1371/journal.pbio.0060308.

38.

Transgene-induced gene silencing is not affected by a change in ploidy level.

Pignatta D, Dilkes B, Wroblewski T, Michelmore RW, Comai L.

PLoS One. 2008 Aug 26;3(8):e3061. doi: 10.1371/journal.pone.0003061.

39.

Genetic basis for dosage sensitivity in Arabidopsis thaliana.

Henry IM, Dilkes BP, Comai L.

PLoS Genet. 2007 Apr 27;3(4):e70. Epub 2007 Mar 19.

40.
41.

Parent-dependent loss of gene silencing during interspecies hybridization.

Josefsson C, Dilkes B, Comai L.

Curr Biol. 2006 Jul 11;16(13):1322-8.

42.

Cyclin-dependent kinase inhibitors in maize endosperm and their potential role in endoreduplication.

Coelho CM, Dante RA, Sabelli PA, Sun Y, Dilkes BP, Gordon-Kamm WJ, Larkins BA.

Plant Physiol. 2005 Aug;138(4):2323-36. Epub 2005 Jul 29.

43.

Aneuploidy and genetic variation in the Arabidopsis thaliana triploid response.

Henry IM, Dilkes BP, Young K, Watson B, Wu H, Comai L.

Genetics. 2005 Aug;170(4):1979-88. Epub 2005 Jun 8.

44.

A differential dosage hypothesis for parental effects in seed development.

Dilkes BP, Comai L.

Plant Cell. 2004 Dec;16(12):3174-80. Review. No abstract available.

45.

Maize opaque endosperm mutations create extensive changes in patterns of gene expression.

Hunter BG, Beatty MK, Singletary GW, Hamaker BR, Dilkes BP, Larkins BA, Jung R.

Plant Cell. 2002 Oct;14(10):2591-612.

46.

Stimulation of the cell cycle and maize transformation by disruption of the plant retinoblastoma pathway.

Gordon-Kamm W, Dilkes BP, Lowe K, Hoerster G, Sun X, Ross M, Church L, Bunde C, Farrell J, Hill P, Maddock S, Snyder J, Sykes L, Li Z, Woo YM, Bidney D, Larkins BA.

Proc Natl Acad Sci U S A. 2002 Sep 3;99(18):11975-80. Epub 2002 Aug 16.

47.
48.

Investigating the hows and whys of DNA endoreduplication.

Larkins BA, Dilkes BP, Dante RA, Coelho CM, Woo YM, Liu Y.

J Exp Bot. 2001 Feb;52(355):183-92. Review.

PMID:
11283162
49.

Characterization of maize (Zea mays L.) Wee1 and its activity in developing endosperm.

Sun Y, Dilkes BP, Zhang C, Dante RA, Carneiro NP, Lowe KS, Jung R, Gordon-Kamm WJ, Larkins BA.

Proc Natl Acad Sci U S A. 1999 Mar 30;96(7):4180-5.

50.

The Arabidopsis dwarf1 mutant is defective in the conversion of 24-methylenecholesterol to campesterol in brassinosteroid biosynthesis.

Choe S, Dilkes BP, Gregory BD, Ross AS, Yuan H, Noguchi T, Fujioka S, Takatsuto S, Tanaka A, Yoshida S, Tax FE, Feldmann KA.

Plant Physiol. 1999 Mar;119(3):897-907.

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