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Items: 11

1.

Unique Molecular Identifiers reveal a novel sequencing artefact with implications for RNA-Seq based gene expression analysis.

Sena JA, Galotto G, Devitt NP, Connick MC, Jacobi JL, Umale PE, Vidali L, Bell CJ.

Sci Rep. 2018 Sep 3;8(1):13121. doi: 10.1038/s41598-018-31064-7.

2.

Correction: Dengue virus serotype 2 infection alters midgut and carcass gene expression in the Asian tiger mosquito, Aedes albopictus.

Tsujimoto H, Hanley KA, Sundararajan A, Devitt NP, Schilkey FD, Hansen IA.

PLoS One. 2018 Jan 25;13(1):e0192128. doi: 10.1371/journal.pone.0192128. eCollection 2018.

3.

Draft Genome Sequence of a Gordonia sp. Isolated from the Soil of a Red Alder Plant.

Devitt NP, Herman B, Luchterhand RA, Costa MA, Jacobi JL, Davin LB, Lewis NG, Bell CJ.

Genome Announc. 2017 Sep 28;5(39). pii: e01039-17. doi: 10.1128/genomeA.01039-17.

4.

Strategies for optimizing BioNano and Dovetail explored through a second reference quality assembly for the legume model, Medicago truncatula.

Moll KM, Zhou P, Ramaraj T, Fajardo D, Devitt NP, Sadowsky MJ, Stupar RM, Tiffin P, Miller JR, Young ND, Silverstein KAT, Mudge J.

BMC Genomics. 2017 Aug 4;18(1):578. doi: 10.1186/s12864-017-3971-4.

5.

Dengue virus serotype 2 infection alters midgut and carcass gene expression in the Asian tiger mosquito, Aedes albopictus.

Tsujimoto H, Hanley KA, Sundararajan A, Devitt NP, Schilkey FD, Hansen IA.

PLoS One. 2017 Feb 2;12(2):e0171345. doi: 10.1371/journal.pone.0171345. eCollection 2017. Erratum in: PLoS One. 2018 Jan 25;13(1):e0192128.

6.

De novo assembly of a tadpole shrimp (Triops newberryi) transcriptome and preliminary differential gene expression analysis.

Horn RL, Ramaraj T, Devitt NP, Schilkey FD, Cowley DE.

Mol Ecol Resour. 2017 Mar;17(2):161-171. doi: 10.1111/1755-0998.12555. Epub 2016 Jul 12.

7.

Complete Genome Sequence of Streptomyces venezuelae ATCC 15439, Producer of the Methymycin/Pikromycin Family of Macrolide Antibiotics, Using PacBio Technology.

He J, Sundararajan A, Devitt NP, Schilkey FD, Ramaraj T, Melançon CE 3rd.

Genome Announc. 2016 May 5;4(3). pii: e00337-16. doi: 10.1128/genomeA.00337-16.

8.

Genome Sequence of Janthinobacterium sp. CG23_2, a Violacein-Producing Isolate from an Antarctic Supraglacial Stream.

Smith HJ, Foreman CM, Akiyama T, Franklin MJ, Devitt NP, Ramaraj T.

Genome Announc. 2016 Jan 28;4(1). pii: e01468-15. doi: 10.1128/genomeA.01468-15.

9.

Draft Genome Sequences of Vancomycin-Susceptible Staphylococcus aureus Related to Heterogeneous Vancomycin-Intermediate S. aureus.

Ramaraj T, Matyi SA, Sundararajan A, Lindquist IE, Devitt NP, Schilkey FD, Lamichhane-Khadka R, Hoyt PR, Mudge J, Gustafson JE.

Genome Announc. 2014 Oct 9;2(5). pii: e01033-14. doi: 10.1128/genomeA.01033-14.

10.

Draft Genomes of Heterogeneous Vancomycin-Intermediate Staphylococcus aureus Strain MM66 and MM66 Derivatives with Altered Vancomycin Resistance Levels.

Matyi SA, Ramaraj T, Sundararajan A, Lindquist IE, Devitt NP, Schilkey FD, Lamichhane-Khadka R, Hoyt PR, Mudge J, Gustafson JE.

Genome Announc. 2014 Jul 10;2(4). pii: e00688-14. doi: 10.1128/genomeA.00688-14.

11.

A transcriptomic approach to elucidate the physiological significance of human cytochrome P450 2S1 in bronchial epithelial cells.

Madanayake TW, Lindquist IE, Devitt NP, Mudge J, Rowland AM.

BMC Genomics. 2013 Nov 26;14:833. doi: 10.1186/1471-2164-14-833.

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