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Items: 33

1.

Spatial Patterning of Tissue Volume Loss in Schizophrenia Reflects Brain Network Architecture.

Shafiei G, Markello RD, Makowski C, Talpalaru A, Kirschner M, Devenyi GA, Guma E, Hagmann P, Cashman NR, Lepage M, Chakravarty MM, Dagher A, Mišić B.

Biol Psychiatry. 2019 Oct 24. pii: S0006-3223(19)31785-8. doi: 10.1016/j.biopsych.2019.09.031. [Epub ahead of print]

2.

Altered neurotransmission and neuroimaging biomarkers of chronic arsenic poisoning in wild muskrats (Ondatra zibethicus) and red squirrels (Tamiasciurus hudsonicus) breeding near the City of Yellowknife, Northwest Territories (Canada).

Amuno S, Rudko DA, Gallino D, Tuznik M, Shekh K, Kodzhahinchev V, Niyogi S, Chakravarty MM, Devenyi GA.

Sci Total Environ. 2019 Nov 16:135556. doi: 10.1016/j.scitotenv.2019.135556. [Epub ahead of print]

PMID:
31780150
3.

Investigating microstructural variation in the human hippocampus using non-negative matrix factorization.

Patel R, Steele CJ, Chen AGX, Patel S, Devenyi GA, Germann J, Tardif CL, Chakravarty MM.

Neuroimage. 2019 Nov 9:116348. doi: 10.1016/j.neuroimage.2019.116348. [Epub ahead of print]

4.

Tractography-based targeting of the ventral intermediate nucleus: accuracy and clinical utility in MRgFUS thalamotomy.

Ranjan M, Elias GJB, Boutet A, Zhong J, Chu P, Germann J, Devenyi GA, Chakravarty MM, Fasano A, Hynynen K, Lipsman N, Hamani C, Kucharczyk W, Schwartz ML, Lozano AM, Hodaie M.

J Neurosurg. 2019 Sep 27:1-8. doi: 10.3171/2019.6.JNS19612. [Epub ahead of print]

PMID:
31561221
5.

Identifying schizophrenia subgroups using clustering and supervised learning.

Talpalaru A, Bhagwat N, Devenyi GA, Lepage M, Chakravarty MM.

Schizophr Res. 2019 Dec;214:51-59. doi: 10.1016/j.schres.2019.05.044. Epub 2019 Aug 24.

PMID:
31455518
6.

MR-based age-related effects on the striatum, globus pallidus, and thalamus in healthy individuals across the adult lifespan.

Tullo S, Patel R, Devenyi GA, Salaciak A, Bedford SA, Farzin S, Wlodarski N, Tardif CL; PREVENT-AD Research Group, Breitner JCS, Chakravarty MM.

Hum Brain Mapp. 2019 Dec 15;40(18):5269-5288. doi: 10.1002/hbm.24771. Epub 2019 Aug 26.

PMID:
31452289
7.

Role of D3 dopamine receptors in modulating neuroanatomical changes in response to antipsychotic administration.

Guma E, Rocchetti J, Devenyi GA, Tanti A, Mathieu AP, Lerch JP, Elgbeili G, Courcot B, Mechawar N, Chakravarty MM, Giros B.

Sci Rep. 2019 May 24;9(1):7850. doi: 10.1038/s41598-019-43955-4.

8.

Large-scale analyses of the relationship between sex, age and intelligence quotient heterogeneity and cortical morphometry in autism spectrum disorder.

Bedford SA, Park MTM, Devenyi GA, Tullo S, Germann J, Patel R, Anagnostou E, Baron-Cohen S, Bullmore ET, Chura LR, Craig MC, Ecker C, Floris DL, Holt RJ, Lenroot R, Lerch JP, Lombardo MV, Murphy DGM, Raznahan A, Ruigrok ANV, Smith E, Spencer MD, Suckling J, Taylor MJ, Thurm A; MRC AIMS Consortium, Lai MC, Chakravarty MM.

Mol Psychiatry. 2019 Apr 26. doi: 10.1038/s41380-019-0420-6. [Epub ahead of print]

PMID:
31028290
9.

Longitudinal assessment of the neuroanatomical consequences of deep brain stimulation: Application of fornical DBS in an Alzheimer's mouse model.

Gallino D, Devenyi GA, Germann J, Guma E, Anastassiadis C, Chakravarty MM.

Brain Res. 2019 Jul 15;1715:213-223. doi: 10.1016/j.brainres.2019.03.030. Epub 2019 Mar 26.

PMID:
30926457
10.

Deformation-based Morphometry MRI Reveals Brain Structural Modifications in Living Mu Opioid Receptor Knockout Mice.

Nasseef MT, Devenyi GA, Mechling AE, Harsan LA, Chakravarty MM, Kieffer BL, Darcq E.

Front Psychiatry. 2018 Dec 3;9:643. doi: 10.3389/fpsyt.2018.00643. eCollection 2018.

11.

Contributions of a high-fat diet to Alzheimer's disease-related decline: A longitudinal behavioural and structural neuroimaging study in mouse models.

Rollins CPE, Gallino D, Kong V, Ayranci G, Devenyi GA, Germann J, Chakravarty MM.

Neuroimage Clin. 2019;21:101606. doi: 10.1016/j.nicl.2018.11.016. Epub 2018 Nov 20.

12.

Focused ultrasound thalamotomy location determines clinical benefits in patients with essential tremor.

Boutet A, Ranjan M, Zhong J, Germann J, Xu D, Schwartz ML, Lipsman N, Hynynen K, Devenyi GA, Chakravarty M, Hlasny E, Llinas M, Lozano CS, Elias GJB, Chan J, Coblentz A, Fasano A, Kucharczyk W, Hodaie M, Lozano AM.

Brain. 2018 Dec 1;141(12):3405-3414. doi: 10.1093/brain/awy278.

PMID:
30452554
13.

Dissecting genetic cross-talk between ADHD and other neurodevelopmental disorders: Evidence from behavioural, pharmacological and brain imaging investigations.

Sengupta SM, Fotopoulos N, Devenyi GA, Fortier MÈ, Ter-Stepanian M, Sagliker S, Karama S, Mallar Chakravarty M, Labbe A, Grizenko N, Joober R.

Psychiatry Res. 2018 Nov;269:652-657. doi: 10.1016/j.psychres.2018.08.080. Epub 2018 Aug 28.

PMID:
30216917
14.

Polygenic Risk and Neural Substrates of Attention-Deficit/Hyperactivity Disorder Symptoms in Youths With a History of Mild Traumatic Brain Injury.

Stojanovski S, Felsky D, Viviano JD, Shahab S, Bangali R, Burton CL, Devenyi GA, O'Donnell LJ, Szatmari P, Chakravarty MM, Ameis S, Schachar R, Voineskos AN, Wheeler AL.

Biol Psychiatry. 2019 Mar 1;85(5):408-416. doi: 10.1016/j.biopsych.2018.06.024. Epub 2018 Jul 12.

PMID:
30119875
15.

Reduced resting-state functional connectivity of the basolateral amygdala to the medial prefrontal cortex in preweaning rats exposed to chronic early-life stress.

Guadagno A, Kang MS, Devenyi GA, Mathieu AP, Rosa-Neto P, Chakravarty M, Walker CD.

Brain Struct Funct. 2018 Nov;223(8):3711-3729. doi: 10.1007/s00429-018-1720-3. Epub 2018 Jul 21.

PMID:
30032360
16.

Early-in-life neuroanatomical and behavioural trajectories in a triple transgenic model of Alzheimer's disease.

Kong V, Devenyi GA, Gallino D, Ayranci G, Germann J, Rollins C, Chakravarty MM.

Brain Struct Funct. 2018 Sep;223(7):3365-3382. doi: 10.1007/s00429-018-1691-4. Epub 2018 Jun 13.

PMID:
29948190
17.

A 3D MRI-based atlas of a lizard brain.

Hoops D, Desfilis E, Ullmann JFP, Janke AL, Stait-Gardner T, Devenyi GA, Price WS, Medina L, Whiting MJ, Keogh JS.

J Comp Neurol. 2018 Nov 1;526(16):2511-2547. doi: 10.1002/cne.24480. Epub 2018 Nov 2.

PMID:
29931765
18.

Warping an atlas derived from serial histology to 5 high-resolution MRIs.

Tullo S, Devenyi GA, Patel R, Park MTM, Collins DL, Chakravarty MM.

Sci Data. 2018 Jun 19;5:180107. doi: 10.1038/sdata.2018.107.

19.

Regional brain volume changes following chronic antipsychotic administration are mediated by the dopamine D2 receptor.

Guma E, Rocchetti J, Devenyi GA, Tanti A, Mathieu A, Lerch JP, Elgbeili G, Courcot B, Mechawar N, Chakravarty MM, Giros B.

Neuroimage. 2018 Aug 1;176:226-238. doi: 10.1016/j.neuroimage.2018.04.054. Epub 2018 Apr 26.

PMID:
29704613
20.

A multicohort, longitudinal study of cerebellar development in attention deficit hyperactivity disorder.

Shaw P, Ishii-Takahashi A, Park MT, Devenyi GA, Zibman C, Kasparek S, Sudre G, Mangalmurti A, Hoogman M, Tiemeier H, von Polier G, Shook D, Muetzel R, Chakravarty MM, Konrad K, Durston S, White T.

J Child Psychol Psychiatry. 2018 Oct;59(10):1114-1123. doi: 10.1111/jcpp.12920. Epub 2018 Apr 25.

21.

Ten simple rules for collaborative lesson development.

Devenyi GA, Emonet R, Harris RM, Hertweck KL, Irving D, Milligan I, Wilson G.

PLoS Comput Biol. 2018 Mar 1;14(3):e1005963. doi: 10.1371/journal.pcbi.1005963. eCollection 2018 Mar. No abstract available.

22.

Neuroanatomical and Symptomatic Sex Differences in Individuals at Clinical High Risk for Psychosis.

Guma E, Devenyi GA, Malla A, Shah J, Chakravarty MM, Pruessner M.

Front Psychiatry. 2017 Dec 22;8:291. doi: 10.3389/fpsyt.2017.00291. eCollection 2017.

23.

Can we accurately classify schizophrenia patients from healthy controls using magnetic resonance imaging and machine learning? A multi-method and multi-dataset study.

Winterburn JL, Voineskos AN, Devenyi GA, Plitman E, de la Fuente-Sandoval C, Bhagwat N, Graff-Guerrero A, Knight J, Chakravarty MM.

Schizophr Res. 2019 Dec;214:3-10. doi: 10.1016/j.schres.2017.11.038. Epub 2017 Dec 21.

PMID:
29274736
24.

Regionally specific changes in the hippocampal circuitry accompany progression of cerebrospinal fluid biomarkers in preclinical Alzheimer's disease.

Tardif CL, Devenyi GA, Amaral RSC, Pelleieux S, Poirier J, Rosa-Neto P, Breitner J, Chakravarty MM; PREVENT-AD Research Group.

Hum Brain Mapp. 2018 Feb;39(2):971-984. doi: 10.1002/hbm.23897. Epub 2017 Nov 21.

PMID:
29164798
25.

Cerebellar anatomical alterations and attention to eyes in autism.

Laidi C, Boisgontier J, Chakravarty MM, Hotier S, d'Albis MA, Mangin JF, Devenyi GA, Delorme R, Bolognani F, Czech C, Bouquet C, Toledano E, Bouvard M, Gras D, Petit J, Mishchenko M, Gaman A, Scheid I, Leboyer M, Zalla T, Houenou J.

Sci Rep. 2017 Sep 20;7(1):12008. doi: 10.1038/s41598-017-11883-w.

26.

Heritability of hippocampal subfield volumes using a twin and non-twin siblings design.

Patel S, Park MTM, Devenyi GA, Patel R, Masellis M, Knight J, Chakravarty MM.

Hum Brain Mapp. 2017 Sep;38(9):4337-4352. doi: 10.1002/hbm.23654. Epub 2017 May 31.

PMID:
28561418
27.

The effect of crack cocaine addiction and age on the microstructure and morphology of the human striatum and thalamus using shape analysis and fast diffusion kurtosis imaging.

Garza-Villarreal EA, Chakravarty MM, Hansen B, Eskildsen SF, Devenyi GA, Castillo-Padilla D, Balducci T, Reyes-Zamorano E, Jespersen SN, Perez-Palacios P, Patel R, Gonzalez-Olvera JJ.

Transl Psychiatry. 2017 May 9;7(5):e1122. doi: 10.1038/tp.2017.92.

28.

BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods.

Gorgolewski KJ, Alfaro-Almagro F, Auer T, Bellec P, Capotă M, Chakravarty MM, Churchill NW, Cohen AL, Craddock RC, Devenyi GA, Eklund A, Esteban O, Flandin G, Ghosh SS, Guntupalli JS, Jenkinson M, Keshavan A, Kiar G, Liem F, Raamana PR, Raffelt D, Steele CJ, Quirion PO, Smith RE, Strother SC, Varoquaux G, Wang Y, Yarkoni T, Poldrack RA.

PLoS Comput Biol. 2017 Mar 9;13(3):e1005209. doi: 10.1371/journal.pcbi.1005209. eCollection 2017 Mar.

29.

Evaluating accuracy of striatal, pallidal, and thalamic segmentation methods: Comparing automated approaches to manual delineation.

Makowski C, Béland S, Kostopoulos P, Bhagwat N, Devenyi GA, Malla AK, Joober R, Lepage M, Chakravarty MM.

Neuroimage. 2018 Apr 15;170:182-198. doi: 10.1016/j.neuroimage.2017.02.069. Epub 2017 Mar 1.

PMID:
28259781
30.

Manual segmentation of the fornix, fimbria, and alveus on high-resolution 3T MRI: Application via fully-automated mapping of the human memory circuit white and grey matter in healthy and pathological aging.

Amaral RSC, Park MTM, Devenyi GA, Lynn V, Pipitone J, Winterburn J, Chavez S, Schira M, Lobaugh NJ, Voineskos AN, Pruessner JC, Chakravarty MM; Alzheimer’s Disease Neuroimaging Initiative.

Neuroimage. 2018 Apr 15;170:132-150. doi: 10.1016/j.neuroimage.2016.10.027. Epub 2016 Oct 18.

PMID:
27765611
31.

Advanced processing and simulation of MRS data using the FID appliance (FID-A)-An open source, MATLAB-based toolkit.

Simpson R, Devenyi GA, Jezzard P, Hennessy TJ, Near J.

Magn Reson Med. 2017 Jan;77(1):23-33. doi: 10.1002/mrm.26091. Epub 2015 Dec 30.

PMID:
26715192
32.

Epitaxially driven formation of intricate supported gold nanostructures on a lattice-matched oxide substrate.

Devenyi GA, Li J, Hughes RA, Shi AC, Mascher P, Preston JS.

Nano Lett. 2009 Dec;9(12):4258-63. doi: 10.1021/nl902491g.

PMID:
19842693
33.

The role of substrate surface alteration in the fabrication of vertically aligned CdTe nanowires.

Neretina S, Hughes RA, Devenyi GA, Sochinskii NV, Preston JS, Mascher P.

Nanotechnology. 2008 May 7;19(18):185601. doi: 10.1088/0957-4484/19/18/185601. Epub 2008 Apr 1.

PMID:
21825689

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