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Items: 19

1.

A Longitudinal Study of the Feline Faecal Microbiome Identifies Changes into Early Adulthood Irrespective of Sexual Development.

Deusch O, O'Flynn C, Colyer A, Swanson KS, Allaway D, Morris P.

PLoS One. 2015 Dec 14;10(12):e0144881. doi: 10.1371/journal.pone.0144881. eCollection 2015.

2.

A Pyrosequencing Investigation of Differences in the Feline Subgingival Microbiota in Health, Gingivitis and Mild Periodontitis.

Harris S, Croft J, O'Flynn C, Deusch O, Colyer A, Allsopp J, Milella L, Davis IJ.

PLoS One. 2015 Nov 25;10(11):e0136986. doi: 10.1371/journal.pone.0136986. eCollection 2015.

3.

Comparative Genomics of the Genus Porphyromonas Identifies Adaptations for Heme Synthesis within the Prevalent Canine Oral Species Porphyromonas cangingivalis.

O'Flynn C, Deusch O, Darling AE, Eisen JA, Wallis C, Davis IJ, Harris SJ.

Genome Biol Evol. 2015 Nov 13;7(12):3397-413. doi: 10.1093/gbe/evv220.

4.

A longitudinal assessment of changes in bacterial community composition associated with the development of periodontal disease in dogs.

Wallis C, Marshall M, Colyer A, O'Flynn C, Deusch O, Harris S.

Vet Microbiol. 2015 Dec 31;181(3-4):271-82. doi: 10.1016/j.vetmic.2015.09.003. Epub 2015 Sep 8.

5.

Draft genome sequences of 26 porphyromonas strains isolated from the canine oral microbiome.

Coil DA, Alexiev A, Wallis C, O'Flynn C, Deusch O, Davis I, Horsfall A, Kirkwood N, Jospin G, Eisen JA, Harris S, Darling AE.

Genome Announc. 2015 Apr 9;3(2). pii: e00187-15. doi: 10.1128/genomeA.00187-15.

6.

Early canine plaque biofilms: characterization of key bacterial interactions involved in initial colonization of enamel.

Holcombe LJ, Patel N, Colyer A, Deusch O, O'Flynn C, Harris S.

PLoS One. 2014 Dec 2;9(12):e113744. doi: 10.1371/journal.pone.0113744. eCollection 2014.

7.

Deep Illumina-based shotgun sequencing reveals dietary effects on the structure and function of the fecal microbiome of growing kittens.

Deusch O, O'Flynn C, Colyer A, Morris P, Allaway D, Jones PG, Swanson KS.

PLoS One. 2014 Jul 10;9(7):e101021. doi: 10.1371/journal.pone.0101021. eCollection 2014.

8.

A cross-sectional survey of bacterial species in plaque from client owned dogs with healthy gingiva, gingivitis or mild periodontitis.

Davis IJ, Wallis C, Deusch O, Colyer A, Milella L, Loman N, Harris S.

PLoS One. 2013 Dec 13;8(12):e83158. doi: 10.1371/journal.pone.0083158. eCollection 2013.

9.

Chips and tags suggest plant-environment interactions differ for two alpine Pachycladon species.

Voelckel C, Gruenheit N, Biggs P, Deusch O, Lockhart P.

BMC Genomics. 2012 Jul 19;13:322.

10.

Cutoffs and k-mers: implications from a transcriptome study in allopolyploid plants.

Gruenheit N, Deusch O, Esser C, Becker M, Voelckel C, Lockhart P.

BMC Genomics. 2012 Mar 14;13:92. doi: 10.1186/1471-2164-13-92.

11.

Systematic error in seed plant phylogenomics.

Zhong B, Deusch O, Goremykin VV, Penny D, Biggs PJ, Atherton RA, Nikiforova SV, Lockhart PJ.

Genome Biol Evol. 2011;3:1340-8. doi: 10.1093/gbe/evr105. Epub 2011 Oct 19.

12.

Transcriptomic evidence that longevity of acquired plastids in the photosynthetic slugs Elysia timida and Plakobranchus ocellatus does not entail lateral transfer of algal nuclear genes.

Wägele H, Deusch O, Händeler K, Martin R, Schmitt V, Christa G, Pinzger B, Gould SB, Dagan T, Klussmann-Kolb A, Martin W.

Mol Biol Evol. 2011 Jan;28(1):699-706. doi: 10.1093/molbev/msq239. Epub 2010 Sep 9.

13.

Transketolase from Cyanophora paradoxa: in vitro import into cyanelles and pea chloroplasts and a complex history of a gene often, but not always, transferred in the context of secondary endosymbiosis.

Ma Y, Jakowitsch J, Deusch O, Henze K, Martin W, Löffelhardt W.

J Eukaryot Microbiol. 2009 Nov-Dec;56(6):568-76. doi: 10.1111/j.1550-7408.2009.00437.x.

PMID:
19883445
14.

A proteomic survey of Chlamydomonas reinhardtii mitochondria sheds new light on the metabolic plasticity of the organelle and on the nature of the alpha-proteobacterial mitochondrial ancestor.

Atteia A, Adrait A, Brugière S, Tardif M, van Lis R, Deusch O, Dagan T, Kuhn L, Gontero B, Martin W, Garin J, Joyard J, Rolland N.

Mol Biol Evol. 2009 Jul;26(7):1533-48. doi: 10.1093/molbev/msp068. Epub 2009 Apr 6.

PMID:
19349646
15.

Genes of cyanobacterial origin in plant nuclear genomes point to a heterocyst-forming plastid ancestor.

Deusch O, Landan G, Roettger M, Gruenheit N, Kowallik KV, Allen JF, Martin W, Dagan T.

Mol Biol Evol. 2008 Apr;25(4):748-61. doi: 10.1093/molbev/msn022. Epub 2008 Jan 24.

PMID:
18222943
16.

Evolutionary dynamics of introns in plastid-derived genes in plants: saturation nearly reached but slow intron gain continues.

Basu MK, Rogozin IB, Deusch O, Dagan T, Martin W, Koonin EV.

Mol Biol Evol. 2008 Jan;25(1):111-9. Epub 2007 Oct 31.

PMID:
17974547
17.

Independent wheat B and G genome origins in outcrossing Aegilops progenitor haplotypes.

Kilian B, Ozkan H, Deusch O, Effgen S, Brandolini A, Kohl J, Martin W, Salamini F.

Mol Biol Evol. 2007 Jan;24(1):217-27. Epub 2006 Oct 19.

PMID:
17053048
18.

Haplotype structure at seven barley genes: relevance to gene pool bottlenecks, phylogeny of ear type and site of barley domestication.

Kilian B, Ozkan H, Kohl J, von Haeseler A, Barale F, Deusch O, Brandolini A, Yucel C, Martin W, Salamini F.

Mol Genet Genomics. 2006 Sep;276(3):230-41. Epub 2006 Jun 7.

PMID:
16758198
19.

Chloroplast genome phylogenetics: why we need independent approaches to plant molecular evolution.

Martin W, Deusch O, Stawski N, Grünheit N, Goremykin V.

Trends Plant Sci. 2005 May;10(5):203-9. Review.

PMID:
15882651

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