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Items: 1 to 50 of 226

1.

Deciphering drug resistance in Mycobacterium tuberculosis using whole-genome sequencing: progress, promise, and challenges.

Cohen KA, Manson AL, Desjardins CA, Abeel T, Earl AM.

Genome Med. 2019 Jul 25;11(1):45. doi: 10.1186/s13073-019-0660-8. Review.

2.

Learning Neuroscience with Technology: A Scaffolded, Active Learning Approach.

Schleisman KB, Guzey SS, Lie R, Michlin M, Desjardins C, Shackleton HS, Schwerdfeger AC, Michalowski M, Dubinsky JM.

J Sci Educ Technol. 2018 Dec;27(6):566-580. doi: 10.1007/s10956-018-9748-y. Epub 2018 Aug 24.

PMID:
31105416
3.

Extensive global movement of multidrug-resistantM. tuberculosis strains revealed by whole-genome analysis.

Cohen KA, Manson AL, Abeel T, Desjardins CA, Chapman SB, Hoffner S, Birren BW, Earl AM.

Thorax. 2019 Sep;74(9):882-889. doi: 10.1136/thoraxjnl-2018-211616. Epub 2019 May 2.

4.

Moderators of two dual eating disorder and obesity prevention programs.

Stice E, Desjardins CD, Shaw H, Rohde P.

Behav Res Ther. 2019 Jul;118:77-86. doi: 10.1016/j.brat.2019.04.002. Epub 2019 Apr 12.

PMID:
31005674
5.

Evaluation of the Bio-Rad Geenius HIV 1/2 Assay as Part of a Confirmatory HIV Testing Strategy for Quebec, Canada: Comparison with Western Blot and Inno-Lia Assays.

Serhir B, Desjardins C, Doualla-Bell F, Simard M, Tremblay C, Longtin J.

J Clin Microbiol. 2019 May 24;57(6). pii: e01398-18. doi: 10.1128/JCM.01398-18. Print 2019 Jun.

6.

Emotion regulation and cortisol reactivity during a social evaluative stressor: A study of post-institutionalized youth.

Perry NB, Donzella B, Parenteau AM, Desjardins C, Gunnar MR.

Dev Psychobiol. 2019 May;61(4):557-572. doi: 10.1002/dev.21828. Epub 2019 Feb 12.

PMID:
30746682
7.

Antagonistic paralogs control a switch between growth and pathogen resistance in C. elegans.

Reddy KC, Dror T, Underwood RS, Osman GA, Elder CR, Desjardins CA, Cuomo CA, Barkoulas M, Troemel ER.

PLoS Pathog. 2019 Jan 14;15(1):e1007528. doi: 10.1371/journal.ppat.1007528. eCollection 2019 Jan.

8.

SynerClust: a highly scalable, synteny-aware orthologue clustering tool.

Georgescu CH, Manson AL, Griggs AD, Desjardins CA, Pironti A, Wapinski I, Abeel T, Haas BJ, Earl AM.

Microb Genom. 2018 Nov;4(11). doi: 10.1099/mgen.0.000231. Epub 2018 Nov 12.

9.

Is the urban-adapted ring-billed gull a biovector for flame retardants?

Desjardins CF, Mazerolle MJ, Verreault J.

Environ Pollut. 2019 Jan;244:109-117. doi: 10.1016/j.envpol.2018.10.003. Epub 2018 Oct 6.

PMID:
30321706
10.

The slope of cortisol from awakening to 30 min post-wake in post-institutionalized children and early adolescents.

Leneman KB, Donzella B, Desjardins CD, Miller BS, Gunnar MR.

Psychoneuroendocrinology. 2018 Oct;96:93-99. doi: 10.1016/j.psyneuen.2018.06.011. Epub 2018 Jun 15.

PMID:
29920425
11.

Titan cells formation in Cryptococcus neoformans is finely tuned by environmental conditions and modulated by positive and negative genetic regulators.

Hommel B, Mukaremera L, Cordero RJB, Coelho C, Desjardins CA, Sturny-Leclère A, Janbon G, Perfect JR, Fraser JA, Casadevall A, Cuomo CA, Dromer F, Nielsen K, Alanio A.

PLoS Pathog. 2018 May 18;14(5):e1006982. doi: 10.1371/journal.ppat.1006982. eCollection 2018 May.

12.

Mediators of two selective prevention interventions targeting both obesity and eating disorders.

Rohde P, Desjardins CD, Arigo D, Shaw H, Stice E.

Behav Res Ther. 2018 Jul;106:8-17. doi: 10.1016/j.brat.2018.04.004. Epub 2018 Apr 24.

PMID:
29715529
13.

Interactions between risk factors in the prediction of onset of eating disorders: Exploratory hypothesis generating analyses.

Stice E, Desjardins CD.

Behav Res Ther. 2018 Jun;105:52-62. doi: 10.1016/j.brat.2018.03.005. Epub 2018 Mar 17.

14.

Advances in Cryptococcus genomics: insights into the evolution of pathogenesis.

Cuomo CA, Rhodes J, Desjardins CA.

Mem Inst Oswaldo Cruz. 2018;113(7):e170473. doi: 10.1590/0074-02760170473. Epub 2018 Feb 19. Review.

15.

Prospective memory in idiopathic REM sleep behavior disorder with or without mild cognitive impairment: A preliminary study.

Marcone S, Gagnon JF, Desjardins C, David AC, Postuma RB, Montplaisir J, Joubert S, Rouleau I.

Clin Neuropsychol. 2019 Apr;33(3):571-593. doi: 10.1080/13854046.2018.1435825. Epub 2018 Feb 7.

PMID:
29411691
16.

Peripheral Neuropathy Induced by Microtubule-Targeted Chemotherapies: Insights into Acute Injury and Long-term Recovery.

Wozniak KM, Vornov JJ, Wu Y, Liu Y, Carozzi VA, Rodriguez-Menendez V, Ballarini E, Alberti P, Pozzi E, Semperboni S, Cook BM, Littlefield BA, Nomoto K, Condon K, Eckley S, DesJardins C, Wilson L, Jordan MA, Feinstein SC, Cavaletti G, Polydefkis M, Slusher BS.

Cancer Res. 2018 Feb 1;78(3):817-829. doi: 10.1158/0008-5472.CAN-17-1467. Epub 2017 Nov 30.

17.

Comparative histories of polycyclic aromatic compound accumulation in lake sediments near petroleum operations in western Canada.

Thienpont JR, Desjardins CM, Kimpe LE, Korosi JB, Kokelj SV, Palmer MJ, Muir DCG, Kirk JL, Smol JP, Blais JM.

Environ Pollut. 2017 Dec;231(Pt 1):13-21. doi: 10.1016/j.envpol.2017.07.064. Epub 2017 Aug 3.

PMID:
28780061
18.

Risk and Adversity, Parenting Quality, and Children's Social-Emotional Adjustment in Families Experiencing Homelessness.

Labella MH, Narayan AJ, McCormick CM, Desjardins CD, Masten AS.

Child Dev. 2019 Jan;90(1):227-244. doi: 10.1111/cdev.12894. Epub 2017 Jul 19.

PMID:
28722182
19.

Tracing Genetic Exchange and Biogeography of Cryptococcus neoformans var. grubii at the Global Population Level.

Rhodes J, Desjardins CA, Sykes SM, Beale MA, Vanhove M, Sakthikumar S, Chen Y, Gujja S, Saif S, Chowdhary A, Lawson DJ, Ponzio V, Colombo AL, Meyer W, Engelthaler DM, Hagen F, Illnait-Zaragozi MT, Alanio A, Vreulink JM, Heitman J, Perfect JR, Litvintseva AP, Bicanic T, Harrison TS, Fisher MC, Cuomo CA.

Genetics. 2017 Sep;207(1):327-346. doi: 10.1534/genetics.117.203836. Epub 2017 Jul 5.

20.

Eribulin shows high concentration and long retention in xenograft tumor tissues.

Sugawara M, Condon K, Liang E, DesJardins C, Schuck E, Kusano K, Lai WG.

Cancer Chemother Pharmacol. 2017 Aug;80(2):377-384. doi: 10.1007/s00280-017-3369-7. Epub 2017 Jun 29.

21.

Population genomics and the evolution of virulence in the fungal pathogen Cryptococcus neoformans.

Desjardins CA, Giamberardino C, Sykes SM, Yu CH, Tenor JL, Chen Y, Yang T, Jones AM, Sun S, Haverkamp MR, Heitman J, Litvintseva AP, Perfect JR, Cuomo CA.

Genome Res. 2017 Jul;27(7):1207-1219. doi: 10.1101/gr.218727.116.

22.

Antagonistic regulation of cell-cycle and differentiation gene programs in neonatal cardiomyocytes by homologous MEF2 transcription factors.

Desjardins CA, Naya FJ.

J Biol Chem. 2017 Jun 23;292(25):10613-10629. doi: 10.1074/jbc.M117.776153. Epub 2017 May 4.

23.

Early growth faltering in post-institutionalized youth and later anthropometric and pubertal development.

Reid BM, Miller BS, Dorn LD, Desjardins C, Donzella B, Gunnar M.

Pediatr Res. 2017 Aug;82(2):278-284. doi: 10.1038/pr.2017.35. Epub 2017 May 24.

24.

Genomic analysis of globally diverse Mycobacterium tuberculosis strains provides insights into the emergence and spread of multidrug resistance.

Manson AL, Cohen KA, Abeel T, Desjardins CA, Armstrong DT, Barry CE 3rd, Brand J; TBResist Global Genome Consortium, Chapman SB, Cho SN, Gabrielian A, Gomez J, Jodals AM, Joloba M, Jureen P, Lee JS, Malinga L, Maiga M, Nordenberg D, Noroc E, Romancenco E, Salazar A, Ssengooba W, Velayati AA, Winglee K, Zalutskaya A, Via LE, Cassell GH, Dorman SE, Ellner J, Farnia P, Galagan JE, Rosenthal A, Crudu V, Homorodean D, Hsueh PR, Narayanan S, Pym AS, Skrahina A, Swaminathan S, Van der Walt M, Alland D, Bishai WR, Cohen T, Hoffner S, Birren BW, Earl AM.

Nat Genet. 2017 Mar;49(3):395-402. doi: 10.1038/ng.3767. Epub 2017 Jan 16.

25.

Simultaneous Emergence of Multidrug-Resistant Candida auris on 3 Continents Confirmed by Whole-Genome Sequencing and Epidemiological Analyses.

Lockhart SR, Etienne KA, Vallabhaneni S, Farooqi J, Chowdhary A, Govender NP, Colombo AL, Calvo B, Cuomo CA, Desjardins CA, Berkow EL, Castanheira M, Magobo RE, Jabeen K, Asghar RJ, Meis JF, Jackson B, Chiller T, Litvintseva AP.

Clin Infect Dis. 2017 Jan 15;64(2):134-140. doi: 10.1093/cid/ciw691. Epub 2016 Oct 20. Erratum in: Clin Infect Dis. 2018 Aug 31;67(6):987.

26.

Whole-Genome Sequencing of Mycobacterium tuberculosis Provides Insight into the Evolution and Genetic Composition of Drug-Resistant Tuberculosis in Belarus.

Wollenberg KR, Desjardins CA, Zalutskaya A, Slodovnikova V, Oler AJ, Quiñones M, Abeel T, Chapman SB, Tartakovsky M, Gabrielian A, Hoffner S, Skrahin A, Birren BW, Rosenthal A, Skrahina A, Earl AM.

J Clin Microbiol. 2017 Feb;55(2):457-469. doi: 10.1128/JCM.02116-16. Epub 2016 Nov 30.

27.

Genome Diversity, Recombination, and Virulence across the Major Lineages of Paracoccidioides.

Muñoz JF, Farrer RA, Desjardins CA, Gallo JE, Sykes S, Sakthikumar S, Misas E, Whiston EA, Bagagli E, Soares CM, Teixeira MM, Taylor JW, Clay OK, McEwen JG, Cuomo CA.

mSphere. 2016 Sep 28;1(5). pii: e00213-16. eCollection 2016 Sep-Oct.

28.
29.

Genomic Analysis of the Evolution of Fluoroquinolone Resistance in Mycobacterium tuberculosis Prior to Tuberculosis Diagnosis.

Zhang D, Gomez JE, Chien JY, Haseley N, Desjardins CA, Earl AM, Hsueh PR, Hung DT.

Antimicrob Agents Chemother. 2016 Oct 21;60(11):6600-6608. doi: 10.1128/AAC.00664-16. Print 2016 Nov.

30.

Baeyer-Villiger Monooxygenases EthA and MymA Are Required for Activation of Replicating and Non-replicating Mycobacterium tuberculosis Inhibitors.

Grant SS, Wellington S, Kawate T, Desjardins CA, Silvis MR, Wivagg C, Thompson M, Gordon K, Kazyanskaya E, Nietupski R, Haseley N, Iwase N, Earl AM, Fitzgerald M, Hung DT.

Cell Chem Biol. 2016 Jun 23;23(6):666-77. doi: 10.1016/j.chembiol.2016.05.011. Epub 2016 Jun 16.

31.

Sustained Accumulation of Microtubule-Binding Chemotherapy Drugs in the Peripheral Nervous System: Correlations with Time Course and Neurotoxic Severity.

Wozniak KM, Vornov JJ, Wu Y, Nomoto K, Littlefield BA, DesJardins C, Yu Y, Lai G, Reyderman L, Wong N, Slusher BS.

Cancer Res. 2016 Jun 1;76(11):3332-9. doi: 10.1158/0008-5472.CAN-15-2525. Epub 2016 Apr 13.

32.

Genomic and functional analyses of Mycobacterium tuberculosis strains implicate ald in D-cycloserine resistance.

Desjardins CA, Cohen KA, Munsamy V, Abeel T, Maharaj K, Walker BJ, Shea TP, Almeida DV, Manson AL, Salazar A, Padayatchi N, O'Donnell MR, Mlisana KP, Wortman J, Birren BW, Grosset J, Earl AM, Pym AS.

Nat Genet. 2016 May;48(5):544-51. doi: 10.1038/ng.3548. Epub 2016 Apr 11.

33.

Simulation of Lake Victoria Circulation Patterns Using the Regional Ocean Modeling System (ROMS).

Nyamweya C, Desjardins C, Sigurdsson S, Tomasson T, Taabu-Munyaho A, Sitoki L, Stefansson G.

PLoS One. 2016 Mar 31;11(3):e0151272. doi: 10.1371/journal.pone.0151272. eCollection 2016.

34.

Draft Genome Sequences of Two Extensively Drug-Resistant Strains of Mycobacterium tuberculosis Belonging to the Euro-American S Lineage.

Malinga LA, Abeel T, Desjardins CA, Dlamini TC, Cassell G, Chapman SB, Birren BW, Earl AM, van der Walt M.

Genome Announc. 2016 Mar 3;4(2). pii: e01771-15. doi: 10.1128/genomeA.01771-15.

35.

Whole Genome Sequencing of Mycobacterium africanum Strains from Mali Provides Insights into the Mechanisms of Geographic Restriction.

Winglee K, Manson McGuire A, Maiga M, Abeel T, Shea T, Desjardins CA, Diarra B, Baya B, Sanogo M, Diallo S, Earl AM, Bishai WR.

PLoS Negl Trop Dis. 2016 Jan 11;10(1):e0004332. doi: 10.1371/journal.pntd.0004332. eCollection 2016 Jan.

36.

Women in academic surgery: why is the playing field still not level?

Seemann NM, Webster F, Holden HA, Moulton CA, Baxter N, Desjardins C, Cil T.

Am J Surg. 2016 Feb;211(2):343-9. doi: 10.1016/j.amjsurg.2015.08.036. Epub 2015 Nov 17.

PMID:
26723836
37.

The Dynamic Genome and Transcriptome of the Human Fungal Pathogen Blastomyces and Close Relative Emmonsia.

Muñoz JF, Gauthier GM, Desjardins CA, Gallo JE, Holder J, Sullivan TD, Marty AJ, Carmen JC, Chen Z, Ding L, Gujja S, Magrini V, Misas E, Mitreva M, Priest M, Saif S, Whiston EA, Young S, Zeng Q, Goldman WE, Mardis ER, Taylor JW, McEwen JG, Clay OK, Klein BS, Cuomo CA.

PLoS Genet. 2015 Oct 6;11(10):e1005493. doi: 10.1371/journal.pgen.1005493. eCollection 2015 Oct.

38.

Evolution of Extensively Drug-Resistant Tuberculosis over Four Decades: Whole Genome Sequencing and Dating Analysis of Mycobacterium tuberculosis Isolates from KwaZulu-Natal.

Cohen KA, Abeel T, Manson McGuire A, Desjardins CA, Munsamy V, Shea TP, Walker BJ, Bantubani N, Almeida DV, Alvarado L, Chapman SB, Mvelase NR, Duffy EY, Fitzgerald MG, Govender P, Gujja S, Hamilton S, Howarth C, Larimer JD, Maharaj K, Pearson MD, Priest ME, Zeng Q, Padayatchi N, Grosset J, Young SK, Wortman J, Mlisana KP, O'Donnell MR, Birren BW, Bishai WR, Pym AS, Earl AM.

PLoS Med. 2015 Sep 29;12(9):e1001880. doi: 10.1371/journal.pmed.1001880. eCollection 2015 Sep.

39.

Genome Evolution and Innovation across the Four Major Lineages of Cryptococcus gattii.

Farrer RA, Desjardins CA, Sakthikumar S, Gujja S, Saif S, Zeng Q, Chen Y, Voelz K, Heitman J, May RC, Fisher MC, Cuomo CA.

MBio. 2015 Sep 1;6(5):e00868-15. doi: 10.1128/mBio.00868-15.

40.

MEF2D deficiency in neonatal cardiomyocytes triggers cell cycle re-entry and programmed cell death in vitro.

Estrella NL, Clark AL, Desjardins CA, Nocco SE, Naya FJ.

J Biol Chem. 2015 Oct 2;290(40):24367-80. doi: 10.1074/jbc.M115.666461. Epub 2015 Aug 20.

41.

Epidemiologic Investigation of a Cluster of Neuroinvasive Bacillus cereus Infections in 5 Patients With Acute Myelogenous Leukemia.

Rhee C, Klompas M, Tamburini FB, Fremin BJ, Chea N, Epstein L, Halpin AL, Guh A, Gallen R, Coulliette A, Gee J, Hsieh C, Desjardins CA, Pedamullu CS, DeAngelo DJ, Manzo VE, Folkerth RD, Milner DA Jr, Pecora N, Osborne M, Chalifoux-Judge D, Bhatt AS, Yokoe DS.

Open Forum Infect Dis. 2015 Jul 1;2(3):ofv096. doi: 10.1093/ofid/ofv096. eCollection 2015 Sep.

42.

Correction: EGR1 functions as a potent repressor of MEF2 transcriptional activity.

Feng Y, Desjardins CA, Cooper O, Kontor A, Nocco SE, Naya FJ.

PLoS One. 2015 Jun 24;10(6):e0131619. doi: 10.1371/journal.pone.0131619. eCollection 2015. No abstract available.

43.

EGR1 Functions as a Potent Repressor of MEF2 Transcriptional Activity.

Feng Y, Desjardins CA, Cooper O, Kontor A, Nocco SE, Naya FJ.

PLoS One. 2015 May 26;10(5):e0127641. doi: 10.1371/journal.pone.0127641. eCollection 2015. Erratum in: PLoS One. 2015;10(6):e0131619.

44.

Fatal nosocomial MDR TB identified through routine genetic analysis and whole-genome sequencing.

Williams OM, Abeel T, Casali N, Cohen K, Pym AS, Mungall SB, Desjardins CA, Banerjee A, Drobniewski F, Earl AM, Cooke GS.

Emerg Infect Dis. 2015 Jun;21(6):1082-4. doi: 10.3201/eid2106.141903. No abstract available.

45.

Contrasting host-pathogen interactions and genome evolution in two generalist and specialist microsporidian pathogens of mosquitoes.

Desjardins CA, Sanscrainte ND, Goldberg JM, Heiman D, Young S, Zeng Q, Madhani HD, Becnel JJ, Cuomo CA.

Nat Commun. 2015 May 13;6:7121. doi: 10.1038/ncomms8121.

46.

MEF2 transcription factors regulate distinct gene programs in mammalian skeletal muscle differentiation.

Estrella NL, Desjardins CA, Nocco SE, Clark AL, Maksimenko Y, Naya FJ.

J Biol Chem. 2015 Jan 9;290(2):1256-68. doi: 10.1074/jbc.M114.589838. Epub 2014 Nov 21.

47.

Ubiquitin-mediated response to microsporidia and virus infection in C. elegans.

Bakowski MA, Desjardins CA, Smelkinson MG, Dunbar TL, Lopez-Moyado IF, Rifkin SA, Cuomo CA, Troemel ER.

PLoS Pathog. 2014 Jun 19;10(6):e1004200. doi: 10.1371/journal.ppat.1004200. eCollection 2014 Jun. Erratum in: PLoS Pathog. 2014 Aug;10(8):e1004371. Dunbar, Tiffany A [corrected to Dunbar, Tiffany L].

48.

Factors affecting the relative age effect in NHL athletes.

Parent-Harvey CI, Desjardins C, Harvey EJ.

Can J Surg. 2014 Jun;57(3):157-61.

49.

Chronic treatment with novel small molecule Hsp90 inhibitors rescues striatal dopamine levels but not α-synuclein-induced neuronal cell loss.

McFarland NR, Dimant H, Kibuuka L, Ebrahimi-Fakhari D, Desjardins CA, Danzer KM, Danzer M, Fan Z, Schwarzschild MA, Hirst W, McLean PJ.

PLoS One. 2014 Jan 20;9(1):e86048. doi: 10.1371/journal.pone.0086048. eCollection 2014.

50.

The development of thought problems: a longitudinal family risk study of offspring of bipolar, unipolar, and well parents.

Klimes-Dougan B, Desjardins CD, James MG, Narayan AJ, Long JD, Cullen KR, Gold PW, Martinez PE.

Dev Psychopathol. 2013 Nov;25(4 Pt 1):1079-91. doi: 10.1017/S0954579413000382.

PMID:
24229550

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