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Items: 1 to 50 of 540

1.

Intragenic antagonistic roles of protein and circRNA in tumorigenesis.

Guarnerio J, Zhang Y, Cheloni G, Panella R, Mae Katon J, Simpson M, Matsumoto A, Papa A, Loretelli C, Petri A, Kauppinen S, Garbutt C, Petur Nielsen G, Deshpande V, Castillo-Martin M, Cordon-Cardo C, Dimitrios S, Clohessy JG, Batish M, Paolo Pandolfi P.

Cell Res. 2019 Jun 17. doi: 10.1038/s41422-019-0192-1. [Epub ahead of print]

PMID:
31209250
2.

Stromal Microenvironment Shapes the Intratumoral Architecture of Pancreatic Cancer.

Ligorio M, Sil S, Malagon-Lopez J, Nieman LT, Misale S, Di Pilato M, Ebright RY, Karabacak MN, Kulkarni AS, Liu A, Vincent Jordan N, Franses JW, Philipp J, Kreuzer J, Desai N, Arora KS, Rajurkar M, Horwitz E, Neyaz A, Tai E, Magnus NKC, Vo KD, Yashaswini CN, Marangoni F, Boukhali M, Fatherree JP, Damon LJ, Xega K, Desai R, Choz M, Bersani F, Langenbucher A, Thapar V, Morris R, Wellner UF, Schilling O, Lawrence MS, Liss AS, Rivera MN, Deshpande V, Benes CH, Maheswaran S, Haber DA, Fernandez-Del-Castillo C, Ferrone CR, Haas W, Aryee MJ, Ting DT.

Cell. 2019 May 23. pii: S0092-8674(19)30510-0. doi: 10.1016/j.cell.2019.05.012. [Epub ahead of print]

PMID:
31155233
3.

Autoimmune Pancreatitis Type 2: Diagnostic Utility of PD-L1 Immunohistochemistry.

Gupta R, Neyaz A, Chougule A, Akita M, Zen Y, Forcione D, Castillo CF, Ferrone CR, Deshpande V.

Am J Surg Pathol. 2019 Jul;43(7):898-906. doi: 10.1097/PAS.0000000000001282.

PMID:
31135488
4.

Molecular characteristics of poorly differentiated chordoma.

Shih AR, Chebib I, Deshpande V, Dickson BC, Iafrate AJ, Nielsen GP.

Genes Chromosomes Cancer. 2019 May 28. doi: 10.1002/gcc.22782. [Epub ahead of print]

PMID:
31135077
5.

ExpansionHunter: A sequence-graph based tool to analyze variation in short tandem repeat regions.

Dolzhenko E, Deshpande V, Schlesinger F, Krusche P, Petrovski R, Chen S, Emig-Agius D, Gross A, Narzisi G, Bowman B, Scheffler K, van Vugt JJFA, French C, Sanchis-Juan A, Ibáñez K, Tucci A, Lajoie B, Veldink JH, Raymond FL, Taft RJ, Bentley DR, Eberle MA.

Bioinformatics. 2019 May 27. pii: btz431. doi: 10.1093/bioinformatics/btz431. [Epub ahead of print]

PMID:
31134279
6.

TAS-120 overcomes resistance to ATP-competitive FGFR inhibitors in patients with FGFR2 fusion-positive intrahepatic cholangiocarcinoma.

Goyal L, Shi L, Liu LY, Fece de la Cruz F, Lennerz JK, Raghavan S, Leshchiner I, Elagina L, Siravegna G, Ng RWS, Vu P, Patra KC, Saha SK, Uppot RN, Arellano R, Reyes S, Sagara T, Otsuki S, Nadres B, Shahzade HA, Dey-Guha I, Fetter IJ, Baiev I, Van Seventer EE, Murphy JE, Ferrone CR, Tanabe KK, Deshpande V, Harding JJ, Yaeger R, Kelley RK, Bardelli A, Iafrate AJ, Hahn WC, Benes CH, Ting DT, Hirai H, Getz G, Juric D, Zhu AX, Corcoran RB, Bardeesy N.

Cancer Discov. 2019 May 20. pii: CD-19-0182. doi: 10.1158/2159-8290.CD-19-0182. [Epub ahead of print]

PMID:
31109923
7.

ABHD15 regulates adipose tissue lipolysis and hepatic lipid accumulation.

Stöckli J, Zadoorian A, Cooke KC, Deshpande V, Yau B, Herrmann G, Kebede MA, Humphrey SJ, James DE.

Mol Metab. 2019 Jul;25:83-94. doi: 10.1016/j.molmet.2019.05.002. Epub 2019 May 6.

8.

Radiation-induced and neurofibromatosis-associated malignant peripheral nerve sheath tumors (MPNST) have worse outcomes than sporadic MPNST.

Miao R, Wang H, Jacobson A, Lietz AP, Choy E, Raskin KA, Schwab JH, Deshpande V, Nielsen GP, DeLaney TF, Cote GM, Hornicek FJ, Chen YE.

Radiother Oncol. 2019 May 9;137:61-70. doi: 10.1016/j.radonc.2019.03.015. [Epub ahead of print]

PMID:
31078939
9.

Entropic Forces Drive Cellular Contact Guidance.

Buskermolen ABC, Suresh H, Shishvan SS, Vigliotti A, DeSimone A, Kurniawan NA, Bouten CVC, Deshpande VS.

Biophys J. 2019 May 21;116(10):1994-2008. doi: 10.1016/j.bpj.2019.04.003. Epub 2019 Apr 10.

10.

Reduced insulin action in muscle of high fat diet rats over the diurnal cycle is not associated with defective insulin signaling.

Small L, Brandon AE, Parker BL, Deshpande V, Samsudeen AF, Kowalski GM, Reznick J, Wilks DL, Preston E, Bruce CR, James DE, Turner N, Cooney GJ.

Mol Metab. 2019 Jul;25:107-118. doi: 10.1016/j.molmet.2019.04.006. Epub 2019 Apr 12.

11.

Honokiol for cancer therapeutics: A traditional medicine that can modulate multiple oncogenic targets.

Banik K, Ranaware AM, Deshpande V, Nalawade SP, Padmavathi G, Bordoloi D, Sailo BL, Shanmugam MK, Fan L, Arfuso F, Sethi G, Kunnumakkara AB.

Pharmacol Res. 2019 Jun;144:192-209. doi: 10.1016/j.phrs.2019.04.004. Epub 2019 Apr 17. Review.

PMID:
31002949
12.

Giant Cell Lesions of the Maxillofacial Skeleton Express RANKL by RNA In Situ Hybridization Regardless of Histologic Pattern.

Stagner AM, Sajed DP, Nielsen GP, Ebb DH, Faquin WC, Chebib I, Rivera MN, Ting DT, Resnick CM, Peacock ZS, Kaban LB, Deshpande V.

Am J Surg Pathol. 2019 Jun;43(6):819-826. doi: 10.1097/PAS.0000000000001257.

PMID:
30998511
13.

A microscopically motivated model for the remodeling of cardiomyocytes.

Cohen N, Deshpande VS, Holmes JW, McMeeking RM.

Biomech Model Mechanobiol. 2019 Mar 27. doi: 10.1007/s10237-019-01141-5. [Epub ahead of print]

PMID:
30919201
14.

Manifestation of Kinetic Inductance in Terahertz Plasmon Resonances in Thin-Film Cd3As2.

Chanana A, Lotfizadeh N, Condori Quispe HO, Gopalan P, Winger JR, Blair S, Nahata A, Deshpande VV, Scarpulla MA, Sensale-Rodriguez B.

ACS Nano. 2019 Apr 23;13(4):4091-4100. doi: 10.1021/acsnano.8b08649. Epub 2019 Mar 14.

PMID:
30865427
15.

Spindle cell liposarcoma with a TRIO-TERT fusion transcript.

Suster DI, Deshpande V, Chebib I, Taylor MS, Mullen J, Bredella MA, Nielsen GP.

Virchows Arch. 2019 Feb 22. doi: 10.1007/s00428-019-02545-5. [Epub ahead of print]

PMID:
30793229
16.

Transient active force generation and stress fibre remodelling in cells under cyclic loading.

McEvoy E, Deshpande VS, McGarry P.

Biomech Model Mechanobiol. 2019 Feb 19. doi: 10.1007/s10237-019-01121-9. [Epub ahead of print]

PMID:
30783833
17.

Uniform combined reconstruction of multichannel 7T knee MRI receive coil data without the use of a reference scan.

Chebrolu VV, Kollasch PD, Deshpande V, Grinstead J, Howe BM, Frick MA, Fagan AJ, Benner T, Heidemann RM, Felmlee JP, Amrami KK.

J Magn Reson Imaging. 2019 Feb 19. doi: 10.1002/jmri.26691. [Epub ahead of print]

PMID:
30779475
18.

High IDO1 Expression Is Associated with Poor Outcome in Patients with Anal Cancer Treated with Definitive Chemoradiotherapy.

Mitra D, Horick NK, Brackett DG, Mouw KW, Hornick JL, Ferrone S, Hong TS, Mamon H, Clark JW, Parikh AR, Allen JN, Ryan DP, Ting DT, Deshpande V, Wo JY.

Oncologist. 2019 Jun;24(6):e275-e283. doi: 10.1634/theoncologist.2018-0794. Epub 2019 Feb 12.

PMID:
30755500
19.

Correlation of testicular ultrasonography, testicular biometry, serum testosterone levels and seminal attributes in pre and post-pubertal age for breeding soundness evaluation in Osmanabadi bucks.

Kumbhar UB, Gulavane SU, Gaikwad SM, Shelar RR, Deshpande VP, Rebeiro R, Yadav K.

Trop Anim Health Prod. 2019 Feb 9. doi: 10.1007/s11250-019-01834-0. [Epub ahead of print]

PMID:
30739277
20.

FURIN variant associations with postexercise hypotension are intensity and race dependent.

Cilhoroz BT, Schifano ED, Panza GA, Ash GI, Corso L, Chen MH, Deshpande V, Zaleski A, Farinatti P, Santos LP, Taylor BA, O'Neill RJ, Thompson PD, Pescatello LS.

Physiol Rep. 2019 Feb;7(3):e13952. doi: 10.14814/phy2.13952.

21.

Quasimesenchymal phenotype predicts systemic metastasis in pancreatic ductal adenocarcinoma.

Mahadevan KK, Arora KS, Amzallag A, Williams E, Kulkarni AS, Fernandez-Del Castillo C, Lillemoe KD, Bardeesy N, Hong TS, Ferrone CR, Ting DT, Deshpande V.

Mod Pathol. 2019 Jun;32(6):844-854. doi: 10.1038/s41379-018-0196-2. Epub 2019 Jan 25.

PMID:
30683911
22.

High strength metallic wood from nanostructured nickel inverse opal materials.

Pikul JH, Özerinç S, Liu B, Zhang R, Braun PV, Deshpande VS, King WP.

Sci Rep. 2019 Jan 24;9(1):719. doi: 10.1038/s41598-018-36901-3.

23.

Exploring the landscape of focal amplifications in cancer using AmpliconArchitect.

Deshpande V, Luebeck J, Nguyen ND, Bakhtiari M, Turner KM, Schwab R, Carter H, Mischel PS, Bafna V.

Nat Commun. 2019 Jan 23;10(1):392. doi: 10.1038/s41467-018-08200-y.

24.

Timing But Not Patterns of Recurrence Is Different Between Node-negative and Node-positive Resected Pancreatic Cancer.

Honselmann KC, Pergolini I, Castillo CF, Deshpande V, Ting D, Taylor MS, Bolm L, Qadan M, Wellner U, Sandini M, Bausch D, Warshaw AL, Lillemoe KD, Keck T, Ferrone CR.

Ann Surg. 2019 Jan 18. doi: 10.1097/SLA.0000000000003123. [Epub ahead of print]

PMID:
30672796
25.

Role of Tumor-Associated Macrophages in the Clinical Course of Pancreatic Neuroendocrine Tumors (PanNETs).

Cai L, Michelakos T, Deshpande V, Arora KS, Yamada T, Ting DT, Taylor MS, Castillo CF, Warshaw AL, Lillemoe KD, Ferrone S, Ferrone CR.

Clin Cancer Res. 2019 Apr 15;25(8):2644-2655. doi: 10.1158/1078-0432.CCR-18-1401. Epub 2019 Jan 22.

26.

Impact of intramural and extramural vascular invasion on stage II-III colon cancer outcomes.

Leijssen LGJ, Dinaux AM, Amri R, Taylor MS, Deshpande V, Bordeianou LG, Kunitake H, Berger DL.

J Surg Oncol. 2019 May;119(6):749-757. doi: 10.1002/jso.25367. Epub 2019 Jan 15.

PMID:
30644557
27.

Spin-optoelectronic devices based on hybrid organic-inorganic trihalide perovskites.

Wang J, Zhang C, Liu H, McLaughlin R, Zhai Y, Vardeny SR, Liu X, McGill S, Semenov D, Guo H, Tsuchikawa R, Deshpande VV, Sun D, Vardeny ZV.

Nat Commun. 2019 Jan 10;10(1):129. doi: 10.1038/s41467-018-07952-x.

28.

Tumefactive Inflammatory Diseases of the Pancreas.

Zen Y, Deshpande V.

Am J Pathol. 2019 Jan;189(1):82-93. doi: 10.1016/j.ajpath.2018.05.022. Review.

PMID:
30558726
29.

Thermodynamic Modeling of the Statistics of Cell Spreading on Ligand-Coated Elastic Substrates.

McEvoy E, Shishvan SS, Deshpande VS, McGarry JP.

Biophys J. 2018 Dec 18;115(12):2451-2460. doi: 10.1016/j.bpj.2018.11.007. Epub 2018 Nov 10.

PMID:
30527450
30.

MDM2 RNA In Situ Hybridization for the Diagnosis of Atypical Lipomatous Tumor: A Study Evaluating DNA, RNA, and Protein Expression.

Kulkarni AS, Wojcik JB, Chougule A, Arora K, Chittampalli Y, Kurzawa P, Mullen JT, Chebib I, Nielsen GP, Rivera MN, Ting DT, Deshpande V.

Am J Surg Pathol. 2019 Apr;43(4):446-454. doi: 10.1097/PAS.0000000000001199.

PMID:
30520819
31.

Enhancement in surface mobility and quantum transport of Bi2-xSbxTe3-ySey topological insulator by controlling the crystal growth conditions.

Han KB, Chong SK, Oliynyk AO, Nagaoka A, Petryk S, Scarpulla MA, Deshpande VV, Sparks TD.

Sci Rep. 2018 Nov 23;8(1):17290. doi: 10.1038/s41598-018-35674-z.

32.

Morphologic Overlap Between Inflammatory Myofibroblastic Tumor and IgG4-related Disease: Lessons From Next-generation Sequencing.

Taylor MS, Chougule A, MacLeay AR, Kurzawa P, Chebib I, Le L, Deshpande V.

Am J Surg Pathol. 2019 Mar;43(3):314-324. doi: 10.1097/PAS.0000000000001167.

PMID:
30451733
33.

The histological diagnosis of IgG4-related disease on small biopsies: challenges and pitfalls.

Arora K, Rivera M, Ting DT, Deshpande V.

Histopathology. 2019 Apr;74(5):688-698. doi: 10.1111/his.13787. Epub 2019 Mar 10.

PMID:
30408214
34.

Topological Insulator-Based van der Waals Heterostructures for Effective Control of Massless and Massive Dirac Fermions.

Chong SK, Han KB, Nagaoka A, Tsuchikawa R, Liu R, Liu H, Vardeny ZV, Pesin DA, Lee C, Sparks TD, Deshpande VV.

Nano Lett. 2018 Dec 12;18(12):8047-8053. doi: 10.1021/acs.nanolett.8b04291. Epub 2018 Nov 9.

PMID:
30406664
35.

Spindle and Round Cell Sarcoma With EWSR1-PATZ1 Gene Fusion: A Sarcoma With Polyphenotypic Differentiation.

Chougule A, Taylor MS, Nardi V, Chebib I, Cote GM, Choy E, Nielsen GP, Deshpande V.

Am J Surg Pathol. 2019 Feb;43(2):220-228. doi: 10.1097/PAS.0000000000001183.

PMID:
30379650
36.

Case 30-2018: A 66-Year-Old Woman with Chronic Abdominal Pain.

Rubin AK, Burk KS, Staller K, Kunitake H, Robbins GK, Deshpande V.

N Engl J Med. 2018 Sep 27;379(13):1263-1272. doi: 10.1056/NEJMcpc1802831. No abstract available.

PMID:
30257156
37.

Magnolol: A Neolignan from the Magnolia Family for the Prevention and Treatment of Cancer.

Ranaware AM, Banik K, Deshpande V, Padmavathi G, Roy NK, Sethi G, Fan L, Kumar AP, Kunnumakkara AB.

Int J Mol Sci. 2018 Aug 10;19(8). pii: E2362. doi: 10.3390/ijms19082362. Review.

38.

Flow resistance along the rat renal tubule.

Gilmer GG, Deshpande VG, Chou CL, Knepper M.

Am J Physiol Renal Physiol. 2018 Nov 1;315(5):F1398-F1405. doi: 10.1152/ajprenal.00219.2018. Epub 2018 Aug 8.

PMID:
30089029
39.

Severity and threshold of peanut reactivity during hospital-based open oral food challenges: An international multicenter survey.

Arkwright PD, MacMahon J, Koplin J, Rajput S, Cross S, Fitzsimons R, Davidson N, Deshpande V, Rao N, Lumsden C, Lacy D, Allen KJ, Vance G, Mwenechanya J, Fox AT, Erlewyn-Lajeunesse M, Mistry H, Hourihane JO.

Pediatr Allergy Immunol. 2018 Nov;29(7):754-761. doi: 10.1111/pai.12959. Epub 2018 Sep 17.

PMID:
30022517
40.

The homeostatic ensemble for cells.

Shishvan SS, Vigliotti A, Deshpande VS.

Biomech Model Mechanobiol. 2018 Dec;17(6):1631-1662. doi: 10.1007/s10237-018-1048-1. Epub 2018 Jul 10.

PMID:
29987699
41.

IgG4-related disease: review of the histopathologic features, differential diagnosis, and therapeutic approach.

Bledsoe JR, Della-Torre E, Rovati L, Deshpande V.

APMIS. 2018 Jun;126(6):459-476. doi: 10.1111/apm.12845. Review.

PMID:
29924455
42.

Author Correction: High-fat diet enhances stemness and tumorigenicity of intestinal progenitors.

Beyaz S, Mana MD, Roper J, Kedrin D, Saadatpour A, Hong SJ, Bauer-Rowe KE, Xifaras ME, Akkad A, Arias E, Pinello L, Katz Y, Shinagare S, Abu-Remaileh M, Mihaylova MM, Lamming DW, Dogum R, Guo G, Bell GW, Selig M, Nielsen GP, Gupta N, Ferrone CR, Deshpande V, Yuan GC, Orkin SH, Sabatini DM, Yilmaz ÖH.

Nature. 2018 Aug;560(7717):E26. doi: 10.1038/s41586-018-0187-y.

PMID:
29849139
43.

Fasting Activates Fatty Acid Oxidation to Enhance Intestinal Stem Cell Function during Homeostasis and Aging.

Mihaylova MM, Cheng CW, Cao AQ, Tripathi S, Mana MD, Bauer-Rowe KE, Abu-Remaileh M, Clavain L, Erdemir A, Lewis CA, Freinkman E, Dickey AS, La Spada AR, Huang Y, Bell GW, Deshpande V, Carmeliet P, Katajisto P, Sabatini DM, Yilmaz ÖH.

Cell Stem Cell. 2018 May 3;22(5):769-778.e4. doi: 10.1016/j.stem.2018.04.001.

44.

Tankyrase modulates insulin sensitivity in skeletal muscle cells by regulating the stability of GLUT4 vesicle proteins.

Su Z, Deshpande V, James DE, Stöckli J.

J Biol Chem. 2018 Jun 1;293(22):8578-8587. doi: 10.1074/jbc.RA117.001058. Epub 2018 Apr 18.

45.

ViFi: accurate detection of viral integration and mRNA fusion reveals indiscriminate and unregulated transcription in proximal genomic regions in cervical cancer.

Nguyen ND, Deshpande V, Luebeck J, Mischel PS, Bafna V.

Nucleic Acids Res. 2018 Apr 20;46(7):3309-3325. doi: 10.1093/nar/gky180.

46.

Clinicopathologic characteristics of poorly differentiated chordoma.

Shih AR, Cote GM, Chebib I, Choy E, DeLaney T, Deshpande V, Hornicek FJ, Miao R, Schwab JH, Nielsen GP, Chen YL.

Mod Pathol. 2018 Aug;31(8):1237-1245. doi: 10.1038/s41379-018-0002-1. Epub 2018 Feb 26.

PMID:
29483606
47.

Inflammatory Nodules Identify Steroid-Responsive Primary Sclerosing Cholangitis.

Chen JH, Deshpande V.

Int J Surg Pathol. 2018 Aug;26(5):402-409. doi: 10.1177/1066896918758451. Epub 2018 Feb 21.

PMID:
29464971
48.

Integrin αM activation and upregulation on esophageal eosinophils and periostin-mediated eosinophil survival in eosinophilic esophagitis.

Vimalathas P, Farris A, Letner D, Deshpande V, Yajnik V, Shreffler W, Garber J.

Immunol Cell Biol. 2018 Apr;96(4):426-438. doi: 10.1111/imcb.12018. Epub 2018 Mar 6.

PMID:
29424023
49.

Role of boundary conditions in determining cell alignment in response to stretch.

Chen K, Vigliotti A, Bacca M, McMeeking RM, Deshpande VS, Holmes JW.

Proc Natl Acad Sci U S A. 2018 Jan 30;115(5):986-991. doi: 10.1073/pnas.1715059115. Epub 2018 Jan 17.

50.

Fibroma-like PEComa: A Tuberous Sclerosis Complex-related Lesion.

Larque AB, Kradin RL, Chebib I, Nielsen GP, Selig MK, Thiele EA, Stemmer-Rachamimov A, Bredella MA, Kurzawa P, Deshpande V.

Am J Surg Pathol. 2018 Apr;42(4):500-505. doi: 10.1097/PAS.0000000000001024.

PMID:
29324470

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