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Items: 1 to 50 of 88

1.

PDBe: improved accessibility of macromolecular structure data from PDB and EMDB.

Velankar S, van Ginkel G, Alhroub Y, Battle GM, Berrisford JM, Conroy MJ, Dana JM, Gore SP, Gutmanas A, Haslam P, Hendrickx PM, Lagerstedt I, Mir S, Fernandez Montecelo MA, Mukhopadhyay A, Oldfield TJ, Patwardhan A, Sanz-García E, Sen S, Slowley RA, Wainwright ME, Deshpande MS, Iudin A, Sahni G, Salavert Torres J, Hirshberg M, Mak L, Nadzirin N, Armstrong DR, Clark AR, Smart OS, Korir PK, Kleywegt GJ.

Nucleic Acids Res. 2016 Jan 4;44(D1):D385-95. doi: 10.1093/nar/gkv1047. Epub 2015 Oct 17.

2.

DNA cleavage by oxymyoglobin and cysteine-introduced metmyoglobin.

Deshpande MS, Junedi S, Prakash H, Nagao S, Yamanaka M, Hirota S.

Chem Commun (Camb). 2014 Dec 11;50(95):15034-6. doi: 10.1039/c4cc06617k.

PMID:
25327831
3.

Formation of domain-swapped oligomer of cytochrome C from its molten globule state oligomer.

Deshpande MS, Parui PP, Kamikubo H, Yamanaka M, Nagao S, Komori H, Kataoka M, Higuchi Y, Hirota S.

Biochemistry. 2014 Jul 22;53(28):4696-703. doi: 10.1021/bi500497s. Epub 2014 Jul 9.

PMID:
24981551
4.

Formation of oligomeric cytochrome c during folding by intermolecular hydrophobic interaction between N- and C-terminal α-helices.

Parui PP, Deshpande MS, Nagao S, Kamikubo H, Komori H, Higuchi Y, Kataoka M, Hirota S.

Biochemistry. 2013 Dec 3;52(48):8732-44. doi: 10.1021/bi400986g. Epub 2013 Nov 20.

PMID:
24206001
5.

Effect of shilajit on the heart of Daphnia: A preliminary study.

Gaikwad NS, Panat AV, Deshpande MS, Ramya K, Khalid PU, Augustine P.

J Ayurveda Integr Med. 2012 Jan;3(1):3-5. doi: 10.4103/0975-9476.93938.

6.

Sequence specific association of tryptic peptides with multiwalled carbon nanotubes: effect of localization of hydrophobic residues.

Deshpande MS, Mazumdar S.

Biomacromolecules. 2012 May 14;13(5):1410-9. doi: 10.1021/bm300137d. Epub 2012 Apr 13.

PMID:
22416948
7.

Prospective analysis of reasons for non-enrollment in a phase III randomized controlled trial.

Murthy V, Awatagiri KR, Tike PK, Ghosh-Laskar S, Gupta T, Budrukkar A, Deshpande MS, Chaukar DA, Pantavaidya GH, Agarwal JP.

J Cancer Res Ther. 2012 Jan;8 Suppl 1:S94-9. doi: 10.4103/0973-1482.92221.

PMID:
22322738
8.

Inhibitors of HCV NS5A: From Iminothiazolidinones to Symmetrical Stilbenes.

Romine JL, St Laurent DR, Leet JE, Martin SW, Serrano-Wu MH, Yang F, Gao M, O'Boyle DR 2nd, Lemm JA, Sun JH, Nower PT, Huang XS, Deshpande MS, Meanwell NA, Snyder LB.

ACS Med Chem Lett. 2011 Jan 11;2(3):224-9. doi: 10.1021/ml1002647. eCollection 2011 Mar 10.

9.

Efficacy of the canine influenza virus H3N8 vaccine to decrease severity of clinical disease after cochallenge with canine influenza virus and Streptococcus equi subsp. zooepidemicus.

Larson LJ, Henningson J, Sharp P, Thiel B, Deshpande MS, Davis T, Jayappa H, Wasmoen T, Lakshmanan N, Schultz RD.

Clin Vaccine Immunol. 2011 Apr;18(4):559-64. doi: 10.1128/CVI.00500-10. Epub 2011 Feb 23.

10.

Structural design of the active site for covalent attachment of the heme to the protein matrix: studies on a thermostable cytochrome P450.

Goyal S, Deshpande MS, Mazumdar S.

Biochemistry. 2011 Feb 15;50(6):1042-52. doi: 10.1021/bi101559z. Epub 2011 Jan 20.

PMID:
21192675
11.

Stabilization of acyclic water tetramer in a copper(II) malonate framework structure.

Deshpande MS, Kumbhar AS, Näther C.

Dalton Trans. 2010 Oct 14;39(38):9146-52. doi: 10.1039/c0dt00672f. Epub 2010 Aug 27.

PMID:
20820622
12.

A novel dermal tissue construct: development and in vitro characterization.

Deshpande MS, Kuchroo PV.

Biotechnol Prog. 2010 Sep-Oct;26(5):1424-30. doi: 10.1002/btpr.458.

PMID:
20549681
13.

Prosthetic voice rehabilitation after total laryngectomy.

Deshpande MS.

Indian J Surg Oncol. 2010 Apr;1(2):146-50. doi: 10.1007/s13193-010-0028-4. Epub 2010 Nov 21.

14.

Transmission of canine influenza virus (H3N8) among susceptible dogs.

Jirjis FF, Deshpande MS, Tubbs AL, Jayappa H, Lakshmanan N, Wasmoen TL.

Vet Microbiol. 2010 Aug 26;144(3-4):303-9. doi: 10.1016/j.vetmic.2010.02.029. Epub 2010 Mar 3.

PMID:
20347235
15.

Prognostic factors for loco-regional failure in early stage (I and II) squamous cell carcinoma of the gingivobuccal complex.

Walvekar RR, Chaukar DA, Deshpande MS, Pai PS, Chaturvedi P, Kakade AC, D'Cruz AK.

Eur Arch Otorhinolaryngol. 2010 Jul;267(7):1135-40. doi: 10.1007/s00405-009-1201-7. Epub 2010 Jan 12.

PMID:
20066453
16.

Evaluation of the efficacy of a canine influenza virus (H3N8) vaccine in dogs following experimental challenge.

Deshpande MS, Jirjis FF, Tubbs AL, Jayappa H, Sweeney D, Spencer SJ, Lakshmanan N, Wasmoen TL.

Vet Ther. 2009 Fall;10(3):103-12.

PMID:
20037964
17.

Identification of hepatitis C virus NS5A inhibitors.

Lemm JA, O'Boyle D 2nd, Liu M, Nower PT, Colonno R, Deshpande MS, Snyder LB, Martin SW, St Laurent DR, Serrano-Wu MH, Romine JL, Meanwell NA, Gao M.

J Virol. 2010 Jan;84(1):482-91. doi: 10.1128/JVI.01360-09.

18.

Quality of life in head and neck cancer survivors: a cross-sectional survey.

Chaukar DA, Walvekar RR, Das AK, Deshpande MS, Pai PS, Chaturvedi P, Kakade A, D'Cruz AK.

Am J Otolaryngol. 2009 May-Jun;30(3):176-80. doi: 10.1016/j.amjoto.2008.05.001. Epub 2008 Oct 1.

PMID:
19410123
19.

CD38 regulation in activated astrocytes: implications for neuroinflammation and HIV-1 brain infection.

Kou W, Banerjee S, Eudy J, Smith LM, Persidsky R, Borgmann K, Wu L, Sakhuja N, Deshpande MS, Walseth TF, Ghorpade A.

J Neurosci Res. 2009 Aug 1;87(10):2326-39. doi: 10.1002/jnr.22060.

PMID:
19365854
20.

Ruthenium(II) complexes of bipyridine-glycoluril and their interactions with DNA.

Deshpande MS, Kumbhar AA, Kumbhar AS, Kumbhakar M, Pal H, Sonawane UB, Joshi RR.

Bioconjug Chem. 2009 Mar 18;20(3):447-59. doi: 10.1021/bc800298t.

PMID:
19236020
21.

PET-CT in recurrent head neck cancers: a study to evaluate impact on patient management.

Pantvaidya GH, Agarwal JP, Deshpande MS, Rangarajan V, Singh V, Kakade A, D'Cruz AK.

J Surg Oncol. 2009 Oct 1;100(5):401-3. doi: 10.1002/jso.21257.

PMID:
19235784
22.

Elective neck dissection for the management of the N0 neck in early cancer of the oral tongue: need for a randomized controlled trial.

D'Cruz AK, Siddachari RC, Walvekar RR, Pantvaidya GH, Chaukar DA, Deshpande MS, Pai PS, Chaturvedi P.

Head Neck. 2009 May;31(5):618-24. doi: 10.1002/hed.20988.

PMID:
19132717
23.

Validation and assessment of voice-related quality of life in Indian patients undergoing total laryngectomy and primary tracheoesophageal puncture.

Deshpande MS, Kakade AC, Chaukar DA, Gore VT, Pai PS, Chaturvedi P, D'Cruz AK.

Head Neck. 2009 Jan;31(1):37-44. doi: 10.1002/hed.20922.

PMID:
18798315
24.

Squamous cell carcinoma of the gingivobuccal complex: predictors of locoregional failure in stage III-IV cancers.

Walvekar RR, Chaukar DA, Deshpande MS, Pai PS, Chaturvedi P, Kakade A, D'Cruz AK.

Oral Oncol. 2009 Feb;45(2):135-40. doi: 10.1016/j.oraloncology.2008.04.007. Epub 2008 Jul 14.

PMID:
18621571
25.

Verrucous carcinoma of the oral cavity: A clinical and pathological study of 101 cases.

Walvekar RR, Chaukar DA, Deshpande MS, Pai PS, Chaturvedi P, Kakade A, Kane SV, D'Cruz AK.

Oral Oncol. 2009 Jan;45(1):47-51. doi: 10.1016/j.oraloncology.2008.03.014. Epub 2008 Jul 11.

PMID:
18620896
26.

Radiology quiz case 2. Pseudoaneurysm of the facial artery.

Kamath A, Nagarajan G, Kulkarni AV, Kulkarni S, Deshpande MS, D'Cruz A.

Arch Otolaryngol Head Neck Surg. 2008 Apr;134(4):443, 445. doi: 10.1001/archotol.134.4.443. No abstract available.

PMID:
18427015
27.

In vitro chemosensitivity profile of oral squamous cell cancer and its correlation with clinical response to chemotherapy.

Pathak KA, Juvekar AS, Radhakrishnan DK, Deshpande MS, Pai VR, Chaturvedi P, Pai PS, Chaukar DA, D'Cruz AK, Parikh PM.

Indian J Cancer. 2007 Oct-Dec;44(4):142-6.

28.

Extensive tubercular neck lymphadenopathy in a man with early-stage tongue cancer.

Chaturvedi P, Pai PS, Chaukar DA, Deshpande MS, Rangarajan V, Purandare N, D'cruz AK.

Nat Clin Pract Oncol. 2007 Dec;4(12):726-8.

PMID:
18037877
29.

A prospective study of pharyngocutaneous fistulas following total laryngectomy.

Qureshi SS, Chaturvedi P, Pai PS, Chaukar DA, Deshpande MS, Pathak KA, D'cruz AK.

J Cancer Res Ther. 2005 Jan-Mar;1(1):51-6.

30.

N-(5-chloro-2-(hydroxymethyl)-N-alkyl-arylsulfonamides as gamma-secretase inhibitors.

Parker MF, Barten DM, Bergstrom CP, Bronson JJ, Corsa JA, Deshpande MS, Felsenstein KM, Guss VL, Hansel SB, Johnson G, Keavy DJ, Lau WY, Mock J, Prasad CV, Polson CT, Sloan CP, Smith DW, Wallace OB, Wang HH, Williams A, Zheng M.

Bioorg Med Chem Lett. 2007 Aug 15;17(16):4432-6. Epub 2007 Jun 10.

PMID:
17606371
31.

Hydrolytic cleavage of DNA by a ruthenium(II) polypyridyl complex.

Deshpande MS, Kumbhar AA, Kumbhar AS.

Inorg Chem. 2007 Jul 9;46(14):5450-2. Epub 2007 Jun 8.

PMID:
17555312
32.

Discovery of novel dialkyl substituted thiophene inhibitors of HCV by in silico screening of the NS5B RdRp.

Louise-May S, Yang W, Nie X, Liu D, Deshpande MS, Phadke AS, Huang M, Agarwal A.

Bioorg Med Chem Lett. 2007 Jul 15;17(14):3905-9. Epub 2007 May 3.

PMID:
17512198
33.

Small molecule inhibitors of E. coli primase, a novel bacterial target.

Agarwal A, Louise-May S, Thanassi JA, Podos SD, Cheng J, Thoma C, Liu C, Wiles JA, Nelson DM, Phadke AS, Bradbury BJ, Deshpande MS, Pucci MJ.

Bioorg Med Chem Lett. 2007 May 15;17(10):2807-10. Epub 2007 Feb 25.

PMID:
17350255
34.

Squamous cell carcinoma of the superior gingival-buccal complex.

Pathak KA, Mathur N, Talole S, Deshpande MS, Chaturvedi P, Pai PS, Chaukar DA, D'Cruz AK.

Oral Oncol. 2007 Sep;43(8):774-9. Epub 2007 Feb 15.

PMID:
17306606
35.

Buccal plate excision for buccal paramandibular spread.

Pathak KA, Deshpande MS, Mathur N, Date AS, Chaturvedi P, Pai PS, Chaukar DA, D'Cruz AK.

J Surg Oncol. 2006 Sep 1;94(3):257-9.

PMID:
16900521
36.

Selective neck dissection (I-III) for node negative and node positive necks.

Pathak KA, Das AK, Agarwal R, Talole S, Deshpande MS, Chaturvedi P, Pai PS, Chaukar DA, D'Cruz AK.

Oral Oncol. 2006 Sep;42(8):837-41. Epub 2006 May 26.

PMID:
16730221
37.

Primary reconstruction of small mandibular defects by using mandibular remnant.

Pathak KA, Shah BC, Date AS, Deshpande MS, Chaturvedi P, Pai PS, Chaukar DA, D'Cruz AK.

J Surg Oncol. 2006 Jun 1;93(7):593-5. No abstract available.

PMID:
16705734
38.

Potential mechanisms for astrocyte-TIMP-1 downregulation in chronic inflammatory diseases.

Gardner J, Borgmann K, Deshpande MS, Dhar A, Wu L, Persidsky R, Ghorpade A.

J Neurosci Res. 2006 May 15;83(7):1281-92.

PMID:
16555295
39.
40.

Split therapy: planned neck dissection followed by definitive radiotherapy for a T1, T2 pharyngolaryngeal primary cancer with operable N2, N3 nodal metastases--a prospective study.

D'cruz AK, Pantvaidya GH, Agarwal JP, Chaukar DA, Pathak KA, Deshpande MS, Pai PS, Chaturvedi P, Dinshaw KA.

J Surg Oncol. 2006 Jan 1;93(1):56-61.

PMID:
16353188
41.

Mannheimia (Pasteurella) haemolytica leukotoxin binding domain lies within amino acids 1 to 291 of bovine CD18.

Gopinath RS, Ambagala TC, Deshpande MS, Donis RO, Srikumaran S.

Infect Immun. 2005 Sep;73(9):6179-82.

42.

Simultaneous reconstruction of large skin and mucosal defect following head and neck surgery with a single skin paddle pectoralis major myocutaneous flap.

Chaturvedi P, Pai PS, Pathak KA, Chaukar DA, Deshpande MS, D'Cruz AK.

J Laryngol Otol. 2005 Apr;119(4):303-5.

PMID:
15949086
43.

Advanced squamous cell carcinoma of lower gingivobuccal complex: patterns of spread and failure.

Pathak KA, Gupta S, Talole S, Khanna V, Chaturvedi P, Deshpande MS, Pai PS, Chaukar DA, D'Cruz AK.

Head Neck. 2005 Jul;27(7):597-602.

PMID:
15825204
44.

Pathological fracture in a pregnant woman.

Chaturvedi P, Puri A, Agarwal MG, Pai PS, Pathak KA, Chaukar DA, Deshpande MS, Decruz AK.

Postgrad Med J. 2004 Dec;80(950):740, 743. No abstract available.

45.

Upfront submandibular salivary gland transfer in pharyngeal cancers.

Pathak KA, Bhalavat RL, Mistry RC, Deshpande MS, Bhalla V, Desai SB, Malpani BL.

Oral Oncol. 2004 Oct;40(9):960-3.

PMID:
15380176
46.

Marginal mandibulectomy for lateral sulcus tumours.

Pathak KA, Agarwal R, Deshpande MS.

Eur J Surg Oncol. 2004 Sep;30(7):804-6.

PMID:
15296998
47.

A novel technique of raising a pectoralis major myocutaneous flap through the skin paddle incision alone.

Chaturvedi P, Pathak KA, Pai PS, Chaukar DA, Deshpande MS, D'Cruz AK.

J Surg Oncol. 2004 May 1;86(2):105-6.

PMID:
15112253
48.

Reconstruction of early lower gingivo buccal complex lesions using floor of mouth advancement augmented with hyoglossus release.

Pai PS, Chaturvedi P, D'Cruz AK, Chaukar DA, Pathak KA, Deshpande MS, Kar DK.

J Surg Oncol. 2004 Apr 1;86(1):41-3.

PMID:
15048679
49.

Para-sternal approach for pectoralis major myocutaneous flap in females.

Chaturvedi P, Pai PS, Pathak KA, Chaukar DA, Deshpande MS, Decruz AK.

J Surg Oncol. 2004 Mar 15;85(4):199-201. No abstract available.

PMID:
14991876
50.

Differentially functionalized diamines as novel ligands for the NPY2 receptor.

Andres CJ, Antal Zimanyi I, Deshpande MS, Iben LG, Grant-Young K, Mattson GK, Zhai W.

Bioorg Med Chem Lett. 2003 Sep 1;13(17):2883-5.

PMID:
14611849

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