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Items: 1 to 50 of 57

1.

The analogous and opposing roles of double-stranded RNA-binding proteins in bacterial resistance.

Lim GH, Zhu S, Zhang K, Hoey T, Deragon JM, Kachroo A, Kachroo P.

J Exp Bot. 2019 Mar 11;70(5):1627-1638. doi: 10.1093/jxb/erz019.

PMID:
30843586
2.

Readers of the m6A epitranscriptomic code.

Berlivet S, Scutenaire J, Deragon JM, Bousquet-Antonelli C.

Biochim Biophys Acta Gene Regul Mech. 2019 Mar;1862(3):329-342. doi: 10.1016/j.bbagrm.2018.12.008. Epub 2019 Jan 17. Review.

PMID:
30660758
3.

The YTH Domain Protein ECT2 Is an m6A Reader Required for Normal Trichome Branching in Arabidopsis.

Scutenaire J, Deragon JM, Jean V, Benhamed M, Raynaud C, Favory JJ, Merret R, Bousquet-Antonelli C.

Plant Cell. 2018 May;30(5):986-1005. doi: 10.1105/tpc.17.00854. Epub 2018 Apr 4.

4.

COP1, a negative regulator of photomorphogenesis, positively regulates plant disease resistance via double-stranded RNA binding proteins.

Lim GH, Hoey T, Zhu S, Clavel M, Yu K, Navarre D, Kachroo A, Deragon JM, Kachroo P.

PLoS Pathog. 2018 Mar 7;14(3):e1006894. doi: 10.1371/journal.ppat.1006894. eCollection 2018 Mar.

5.

Sulfur availability regulates plant growth via glucose-TOR signaling.

Dong Y, Silbermann M, Speiser A, Forieri I, Linster E, Poschet G, Allboje Samami A, Wanatabe M, Sticht C, Teleman AA, Deragon JM, Saito K, Hell R, Wirtz M.

Nat Commun. 2017 Oct 27;8(1):1174. doi: 10.1038/s41467-017-01224-w.

6.

Arabidopsis proteins with a transposon-related domain act in gene silencing.

Ikeda Y, Pélissier T, Bourguet P, Becker C, Pouch-Pélissier MN, Pogorelcnik R, Weingartner M, Weigel D, Deragon JM, Mathieu O.

Nat Commun. 2017 May 3;8:15122. doi: 10.1038/ncomms15122.

7.

Heat Shock Protein HSP101 Affects the Release of Ribosomal Protein mRNAs for Recovery after Heat Shock.

Merret R, Carpentier MC, Favory JJ, Picart C, Descombin J, Bousquet-Antonelli C, Tillard P, Lejay L, Deragon JM, Charng YY.

Plant Physiol. 2017 Jun;174(2):1216-1225. doi: 10.1104/pp.17.00269. Epub 2017 Apr 5.

8.

Evolutionary history of double-stranded RNA binding proteins in plants: identification of new cofactors involved in easiRNA biogenesis.

Clavel M, Pélissier T, Montavon T, Tschopp MA, Pouch-Pélissier MN, Descombin J, Jean V, Dunoyer P, Bousquet-Antonelli C, Deragon JM.

Plant Mol Biol. 2016 May;91(1-2):131-47. doi: 10.1007/s11103-016-0448-9. Epub 2016 Feb 9.

PMID:
26858002
9.

The La-related protein 1-specific domain repurposes HEAT-like repeats to directly bind a 5'TOP sequence.

Lahr RM, Mack SM, Héroux A, Blagden SP, Bousquet-Antonelli C, Deragon JM, Berman AJ.

Nucleic Acids Res. 2015 Sep 18;43(16):8077-88. doi: 10.1093/nar/gkv748. Epub 2015 Jul 22.

10.

The role of LARP1 in translation and beyond.

Deragon JM, Bousquet-Antonelli C.

Wiley Interdiscip Rev RNA. 2015 Jul-Aug;6(4):399-417. doi: 10.1002/wrna.1282. Epub 2015 Apr 17. Review.

PMID:
25892282
11.

Parallel action of AtDRB2 and RdDM in the control of transposable element expression.

Clavel M, Pélissier T, Descombin J, Jean V, Picart C, Charbonel C, Saez-Vásquez J, Bousquet-Antonelli C, Deragon JM.

BMC Plant Biol. 2015 Mar 3;15:70. doi: 10.1186/s12870-015-0455-z.

12.

Heat-induced ribosome pausing triggers mRNA co-translational decay in Arabidopsis thaliana.

Merret R, Nagarajan VK, Carpentier MC, Park S, Favory JJ, Descombin J, Picart C, Charng YY, Green PJ, Deragon JM, Bousquet-Antonelli C.

Nucleic Acids Res. 2015 Apr 30;43(8):4121-32. doi: 10.1093/nar/gkv234. Epub 2015 Apr 6.

13.

XRN4 and LARP1 are required for a heat-triggered mRNA decay pathway involved in plant acclimation and survival during thermal stress.

Merret R, Descombin J, Juan YT, Favory JJ, Carpentier MC, Chaparro C, Charng YY, Deragon JM, Bousquet-Antonelli C.

Cell Rep. 2013 Dec 12;5(5):1279-93. doi: 10.1016/j.celrep.2013.11.019.

14.

Uridylation prevents 3' trimming of oligoadenylated mRNAs.

Sement FM, Ferrier E, Zuber H, Merret R, Alioua M, Deragon JM, Bousquet-Antonelli C, Lange H, Gagliardi D.

Nucleic Acids Res. 2013 Aug;41(14):7115-27. doi: 10.1093/nar/gkt465. Epub 2013 Jun 6.

15.

The association of a La module with the PABP-interacting motif PAM2 is a recurrent evolutionary process that led to the neofunctionalization of La-related proteins.

Merret R, Martino L, Bousquet-Antonelli C, Fneich S, Descombin J, Billey E, Conte MR, Deragon JM.

RNA. 2013 Jan;19(1):36-50. doi: 10.1261/rna.035469.112. Epub 2012 Nov 12.

16.

International Congress on Transposable Elements (ICTE) 2012 in Saint Malo and the sea of TE stories.

Ainouche A, Bétermier M, Chandler M, Cordaux R, Cristofari G, Deragon JM, Lesage P, Panaud O, Quesneville H, Vaury C, Vieira C, Vitte C.

Mob DNA. 2012 Oct 30;3(1):17. doi: 10.1186/1759-8753-3-17.

17.

Double-stranded RNA binding proteins DRB2 and DRB4 have an antagonistic impact on polymerase IV-dependent siRNA levels in Arabidopsis.

Pélissier T, Clavel M, Chaparro C, Pouch-Pélissier MN, Vaucheret H, Deragon JM.

RNA. 2011 Aug;17(8):1502-10. doi: 10.1261/rna.2680711. Epub 2011 Jun 23.

18.

Sublethal cadmium intoxication in Arabidopsis thaliana impacts translation at multiple levels.

Sormani R, Delannoy E, Lageix S, Bitton F, Lanet E, Saez-Vasquez J, Deragon JM, Renou JP, Robaglia C.

Plant Cell Physiol. 2011 Feb;52(2):436-47. doi: 10.1093/pcp/pcr001. Epub 2011 Jan 19.

PMID:
21252299
19.

The B73 maize genome: complexity, diversity, and dynamics.

Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, Strong C, Delehaunty K, Fronick C, Courtney B, Rock SM, Belter E, Du F, Kim K, Abbott RM, Cotton M, Levy A, Marchetto P, Ochoa K, Jackson SM, Gillam B, Chen W, Yan L, Higginbotham J, Cardenas M, Waligorski J, Applebaum E, Phelps L, Falcone J, Kanchi K, Thane T, Scimone A, Thane N, Henke J, Wang T, Ruppert J, Shah N, Rotter K, Hodges J, Ingenthron E, Cordes M, Kohlberg S, Sgro J, Delgado B, Mead K, Chinwalla A, Leonard S, Crouse K, Collura K, Kudrna D, Currie J, He R, Angelova A, Rajasekar S, Mueller T, Lomeli R, Scara G, Ko A, Delaney K, Wissotski M, Lopez G, Campos D, Braidotti M, Ashley E, Golser W, Kim H, Lee S, Lin J, Dujmic Z, Kim W, Talag J, Zuccolo A, Fan C, Sebastian A, Kramer M, Spiegel L, Nascimento L, Zutavern T, Miller B, Ambroise C, Muller S, Spooner W, Narechania A, Ren L, Wei S, Kumari S, Faga B, Levy MJ, McMahan L, Van Buren P, Vaughn MW, Ying K, Yeh CT, Emrich SJ, Jia Y, Kalyanaraman A, Hsia AP, Barbazuk WB, Baucom RS, Brutnell TP, Carpita NC, Chaparro C, Chia JM, Deragon JM, Estill JC, Fu Y, Jeddeloh JA, Han Y, Lee H, Li P, Lisch DR, Liu S, Liu Z, Nagel DH, McCann MC, SanMiguel P, Myers AM, Nettleton D, Nguyen J, Penning BW, Ponnala L, Schneider KL, Schwartz DC, Sharma A, Soderlund C, Springer NM, Sun Q, Wang H, Waterman M, Westerman R, Wolfgruber TK, Yang L, Yu Y, Zhang L, Zhou S, Zhu Q, Bennetzen JL, Dawe RK, Jiang J, Jiang N, Presting GG, Wessler SR, Aluru S, Martienssen RA, Clifton SW, McCombie WR, Wing RA, Wilson RK.

Science. 2009 Nov 20;326(5956):1112-5. doi: 10.1126/science.1178534. Erratum in: Science. 2012 Aug 31;337(6098):1040.

20.

Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome.

Baucom RS, Estill JC, Chaparro C, Upshaw N, Jogi A, Deragon JM, Westerman RP, Sanmiguel PJ, Bennetzen JL.

PLoS Genet. 2009 Nov;5(11):e1000732. doi: 10.1371/journal.pgen.1000732. Epub 2009 Nov 20.

21.

Detailed analysis of a contiguous 22-Mb region of the maize genome.

Wei F, Stein JC, Liang C, Zhang J, Fulton RS, Baucom RS, De Paoli E, Zhou S, Yang L, Han Y, Pasternak S, Narechania A, Zhang L, Yeh CT, Ying K, Nagel DH, Collura K, Kudrna D, Currie J, Lin J, Kim H, Angelova A, Scara G, Wissotski M, Golser W, Courtney L, Kruchowski S, Graves TA, Rock SM, Adams S, Fulton LA, Fronick C, Courtney W, Kramer M, Spiegel L, Nascimento L, Kalyanaraman A, Chaparro C, Deragon JM, Miguel PS, Jiang N, Wessler SR, Green PJ, Yu Y, Schwartz DC, Meyers BC, Bennetzen JL, Martienssen RA, McCombie WR, Aluru S, Clifton SW, Schnable PS, Ware D, Wilson RK, Wing RA.

PLoS Genet. 2009 Nov;5(11):e1000728. doi: 10.1371/journal.pgen.1000728. Epub 2009 Nov 20.

22.

A comprehensive analysis of the La-motif protein superfamily.

Bousquet-Antonelli C, Deragon JM.

RNA. 2009 May;15(5):750-64. doi: 10.1261/rna.1478709. Epub 2009 Mar 19.

23.

Arabidopsis eIF2alpha kinase GCN2 is essential for growth in stress conditions and is activated by wounding.

Lageix S, Lanet E, Pouch-Pélissier MN, Espagnol MC, Robaglia C, Deragon JM, Pélissier T.

BMC Plant Biol. 2008 Dec 24;8:134. doi: 10.1186/1471-2229-8-134.

24.

Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses.

Ben Amor B, Wirth S, Merchan F, Laporte P, d'Aubenton-Carafa Y, Hirsch J, Maizel A, Mallory A, Lucas A, Deragon JM, Vaucheret H, Thermes C, Crespi M.

Genome Res. 2009 Jan;19(1):57-69. doi: 10.1101/gr.080275.108. Epub 2008 Nov 7.

25.

Plant transposable elements.

Deragon JM, Casacuberta JM, Panaud O.

Genome Dyn. 2008;4:69-82. doi: 10.1159/000126007.

PMID:
18756078
26.

SINE RNA induces severe developmental defects in Arabidopsis thaliana and interacts with HYL1 (DRB1), a key member of the DCL1 complex.

Pouch-Pélissier MN, Pélissier T, Elmayan T, Vaucheret H, Boko D, Jantsch MF, Deragon JM.

PLoS Genet. 2008 Jun 13;4(6):e1000096. doi: 10.1371/journal.pgen.1000096.

27.

On the evolution and expression of Chlamydomonas reinhardtii nucleus-encoded transfer RNA genes.

Cognat V, Deragon JM, Vinogradova E, Salinas T, Remacle C, Maréchal-Drouard L.

Genetics. 2008 May;179(1):113-23. doi: 10.1534/genetics.107.085688.

28.

A bona fide La protein is required for embryogenesis in Arabidopsis thaliana.

Fleurdépine S, Deragon JM, Devic M, Guilleminot J, Bousquet-Antonelli C.

Nucleic Acids Res. 2007;35(10):3306-21. Epub 2007 Apr 25.

29.
30.

The nanovirus-encoded Clink protein affects plant cell cycle regulation through interaction with the retinoblastoma-related protein.

Lageix S, Catrice O, Deragon JM, Gronenborn B, Pélissier T, Ramírez BC.

J Virol. 2007 Apr;81(8):4177-85. Epub 2007 Jan 31.

31.

Common evolutionary trends for SINE RNA structures.

Sun FJ, Fleurdépine S, Bousquet-Antonelli C, Caetano-Anollés G, Deragon JM.

Trends Genet. 2007 Jan;23(1):26-33. Epub 2006 Nov 28.

PMID:
17126948
32.

Comparative evolution history of SINEs in Arabidopsis thaliana and Brassica oleracea: evidence for a high rate of SINE loss.

Lenoir A, Pélissier T, Bousquet-Antonelli C, Deragon JM.

Cytogenet Genome Res. 2005;110(1-4):441-7.

PMID:
16093696
33.

Development of crop-specific transposable element (SINE) markers for studying gene flow from oilseed rape to wild radish.

Prieto JL, Pouilly N, Jenczewski E, Deragon JM, Chèvre AM.

Theor Appl Genet. 2005 Aug;111(3):446-55. Epub 2005 Jun 8.

PMID:
15942756
34.

Synthesis and processing of tRNA-related SINE transcripts in Arabidopsis thaliana.

Pélissier T, Bousquet-Antonelli C, Lavie L, Deragon JM.

Nucleic Acids Res. 2004 Jul 28;32(13):3957-66. Print 2004.

35.

Utilization of the IR hybrid dysgenesis system in Drosophila to test in vivo mobilization of synthetic SINEs sharing 3' homology with the I factor.

Pélissier T, Tatout C, Lavige JM, Busseau I, Bucheton A, Deragon JM.

Gene. 2002 Feb 20;285(1-2):239-45.

PMID:
12039051
36.

The evolutionary origin and genomic organization of SINEs in Arabidopsis thaliana.

Lenoir A, Lavie L, Prieto JL, Goubely C, Coté JC, Pélissier T, Deragon JM.

Mol Biol Evol. 2001 Dec;18(12):2315-22.

PMID:
11719581
37.

Analysis of the SINE S1 Pol III promoter from Brassica; impact of methylation and influence of external sequences.

Arnaud P, Yukawa Y, Lavie L, Pélissier T, Sugiura M, Deragon JM.

Plant J. 2001 May;26(3):295-305.

38.

Target sites for SINE integration in Brassica genomes display nuclear matrix binding activity.

Tikhonov AP, Lavie L, Tatout C, Bennetzen JL, Avramova Z, Deragon JM.

Chromosome Res. 2001;9(4):325-37.

PMID:
11419796
39.

Impact of transposable elements on the human genome.

Deragon JM, Capy P.

Ann Med. 2000 May;32(4):264-73. Review.

PMID:
10852143
40.

SINE retroposons can be used in vivo as nucleation centers for de novo methylation.

Arnaud P, Goubely C, Pélissier T, Deragon JM.

Mol Cell Biol. 2000 May;20(10):3434-41.

41.

S1 SINE retroposons are methylated at symmetrical and non-symmetrical positions in Brassica napus: identification of a preferred target site for asymmetrical methylation.

Goubely C, Arnaud P, Tatout C, Heslop-Harrison JS, Deragon JM.

Plant Mol Biol. 1999 Jan;39(2):243-55. Erratum in: Plant Mol Biol 1999 May;40(1):197.

PMID:
10080692
42.

Similar target site selection occurs in integration of plant and mammalian retroposons.

Tatout C, Lavie L, Deragon JM.

J Mol Evol. 1998 Oct;47(4):463-70.

PMID:
9767691
43.

Evolution of SINE S1 retroposons in Cruciferae plant species.

Lenoir A, Cournoyer B, Warwick S, Picard G, Deragon JM.

Mol Biol Evol. 1997 Sep;14(9):934-41.

PMID:
9287426
44.

Plant S1 SINEs as a model to study retroposition.

Gilbert N, Arnaud P, Lenoir A, Warwick SI, Picard G, Deragon JM.

Genetica. 1997;100(1-3):155-60. Review.

PMID:
9440268
45.

A transcriptional analysis of the S1Bn (Brassica napus) family of SINE retroposons.

Deragon JM, Gilbert N, Rouquet L, Lenoir A, Arnaud P, Picard G.

Plant Mol Biol. 1996 Dec;32(5):869-78.

PMID:
8980538
46.

DNA regions flanking the major Arabidopsis thaliana satellite are principally enriched in Athila retroelement sequences.

Pélissier T, Tutois S, Tourmente S, Deragon JM, Picard G.

Genetica. 1996 Mar;97(2):141-51.

PMID:
8984010
47.

Athila, a new retroelement from Arabidopsis thaliana.

Pélissier T, Tutois S, Deragon JM, Tourmente S, Genestier S, Picard G.

Plant Mol Biol. 1995 Nov;29(3):441-52.

PMID:
8534844
48.

An analysis of retroposition in plants based on a family of SINEs from Brassica napus.

Deragon JM, Landry BS, Pélissier T, Tutois S, Tourmente S, Picard G.

J Mol Evol. 1994 Oct;39(4):378-86.

PMID:
7966368
49.

Characterization of minisatellites in Arabidopsis thaliana with sequence similarity to the human minisatellite core sequence.

Tourmente S, Deragon JM, Lafleuriel J, Tutois S, Pélissier T, Cuvillier C, Espagnol MC, Picard G.

Nucleic Acids Res. 1994 Aug 25;22(16):3317-21.

50.

Alu RNA transcripts in human embryonal carcinoma cells. Model of post-transcriptional selection of master sequences.

Sinnett D, Richer C, Deragon JM, Labuda D.

J Mol Biol. 1992 Aug 5;226(3):689-706.

PMID:
1507221

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