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Items: 29

1.

Biogeography of Soil Bacterial Networks along a Gradient of Cropping Intensity.

Karimi B, Dequiedt S, Terrat S, Jolivet C, Arrouays D, Wincker P, Cruaud C, Bispo A, Chemidlin Prévost-Bouré N, Ranjard L.

Sci Rep. 2019 Mar 7;9(1):3812. doi: 10.1038/s41598-019-40422-y.

2.

Soil parameters, land use, and geographical distance drive soil bacterial communities along a European transect.

Plassart P, Prévost-Bouré NC, Uroz S, Dequiedt S, Stone D, Creamer R, Griffiths RI, Bailey MJ, Ranjard L, Lemanceau P.

Sci Rep. 2019 Jan 24;9(1):605. doi: 10.1038/s41598-018-36867-2.

3.

Biogeography of soil bacteria and archaea across France.

Karimi B, Terrat S, Dequiedt S, Saby NPA, Horrigue W, Lelièvre M, Nowak V, Jolivet C, Arrouays D, Wincker P, Cruaud C, Bispo A, Maron PA, Bouré NCP, Ranjard L.

Sci Adv. 2018 Jul 4;4(7):eaat1808. doi: 10.1126/sciadv.aat1808. eCollection 2018 Jul.

4.

Profiles of volatile organic compound emissions from soils amended with organic waste products.

Abis L, Loubet B, Ciuraru R, Lafouge F, Dequiedt S, Houot S, Maron PA, Bourgeteau-Sadet S.

Sci Total Environ. 2018 Sep 15;636:1333-1343. doi: 10.1016/j.scitotenv.2018.04.232. Epub 2018 May 4.

PMID:
29913594
5.

Tillage intensity and pasture in rotation effectively shape soil microbial communities at a landscape scale.

Le Guillou C, Chemidlin Prévost-Bouré N, Karimi B, Akkal-Corfini N, Dequiedt S, Nowak V, Terrat S, Menasseri-Aubry S, Viaud V, Maron PA, Ranjard L.

Microbiologyopen. 2019 Apr;8(4):e00676. doi: 10.1002/mbo3.676. Epub 2018 Jun 13.

6.

High Microbial Diversity Promotes Soil Ecosystem Functioning.

Maron PA, Sarr A, Kaisermann A, Lévêque J, Mathieu O, Guigue J, Karimi B, Bernard L, Dequiedt S, Terrat S, Chabbi A, Ranjard L.

Appl Environ Microbiol. 2018 Apr 16;84(9). pii: e02738-17. doi: 10.1128/AEM.02738-17. Print 2018 May 1.

7.

Correction: Mapping and predictive variations of soil bacterial richness across France.

Terrat S, Horrigue W, Dequiedt S, Saby NPA, Lelièvre M, Nowak V, Tripied J, Régnier T, Jolivet C, Arrouays D, Wincker P, Cruaud C, Karimi B, Bispo A, Maron PA, Prévost-Bouré NC, Ranjard L.

PLoS One. 2017 Dec 18;12(12):e0190128. doi: 10.1371/journal.pone.0190128. eCollection 2017.

8.

Mapping and predictive variations of soil bacterial richness across France.

Terrat S, Horrigue W, Dequiedt S, Saby NPA, Lelièvre M, Nowak V, Tripied J, Régnier T, Jolivet C, Arrouays D, Wincker P, Cruaud C, Karimi B, Bispo A, Maron PA, Chemidlin Prévost-Bouré N, Ranjard L.

PLoS One. 2017 Oct 23;12(10):e0186766. doi: 10.1371/journal.pone.0186766. eCollection 2017. Erratum in: PLoS One. 2017 Dec 18;12 (12 ):e0190128.

9.

Soil microbial diversity drives the priming effect along climate gradients: a case study in Madagascar.

Razanamalala K, Razafimbelo T, Maron PA, Ranjard L, Chemidlin N, Lelièvre M, Dequiedt S, Ramaroson VH, Marsden C, Becquer T, Trap J, Blanchart E, Bernard L.

ISME J. 2018 Feb;12(2):451-462. doi: 10.1038/ismej.2017.178. Epub 2017 Oct 17.

10.

GenoSol Platform: A Logistic and Technical Platform for Conserving and Exploring Soil Microbial Diversity.

Dequiedt S, Maron PA, Ranjard L.

Methods Mol Biol. 2016;1399:55-60. doi: 10.1007/978-1-4939-3369-3_3.

PMID:
26791496
11.

FT-IR spectroscopy: A powerful tool for studying the inter- and intraspecific biodiversity of cultivable non-Saccharomyces yeasts isolated from grape must.

Grangeteau C, Gerhards D, Terrat S, Dequiedt S, Alexandre H, Guilloux-Benatier M, von Wallbrunn C, Rousseaux S.

J Microbiol Methods. 2016 Feb;121:50-8. doi: 10.1016/j.mimet.2015.12.009. Epub 2015 Dec 12.

PMID:
26688103
12.

A coordinated set of ecosystem research platforms open to international research in ecotoxicology, AnaEE-France.

Mougin C, Azam D, Caquet T, Cheviron N, Dequiedt S, Le Galliard JF, Guillaume O, Houot S, Lacroix G, Lafolie F, Maron PA, Michniewicz R, Pichot C, Ranjard L, Roy J, Zeller B, Clobert J, Chanzy A.

Environ Sci Pollut Res Int. 2015 Oct;22(20):16215-28. doi: 10.1007/s11356-015-5233-9. Epub 2015 Aug 29.

PMID:
26315587
13.

Land Use History Shifts In Situ Fungal and Bacterial Successions following Wheat Straw Input into the Soil.

Tardy V, Chabbi A, Charrier X, de Berranger C, Reignier T, Dequiedt S, Faivre-Primot C, Terrat S, Ranjard L, Maron PA.

PLoS One. 2015 Jun 23;10(6):e0130672. doi: 10.1371/journal.pone.0130672. eCollection 2015.

14.

Contrasting spatial patterns and ecological attributes of soil bacterial and archaeal taxa across a landscape.

Constancias F, Saby NP, Terrat S, Dequiedt S, Horrigue W, Nowak V, Guillemin JP, Biju-Duval L, Chemidlin Prévost-Bouré N, Ranjard L.

Microbiologyopen. 2015 Jun;4(3):518-31. doi: 10.1002/mbo3.256. Epub 2015 Apr 28.

15.

Mapping and determinism of soil microbial community distribution across an agricultural landscape.

Constancias F, Terrat S, Saby NP, Horrigue W, Villerd J, Guillemin JP, Biju-Duval L, Nowak V, Dequiedt S, Ranjard L, Chemidlin Prévost-Bouré N.

Microbiologyopen. 2015 Jun;4(3):505-17. doi: 10.1002/mbo3.255. Epub 2015 Apr 1.

16.

Similar processes but different environmental filters for soil bacterial and fungal community composition turnover on a broad spatial scale.

Chemidlin Prévost-Bouré N, Dequiedt S, Thioulouse J, Lelièvre M, Saby NP, Jolivet C, Arrouays D, Plassart P, Lemanceau P, Ranjard L.

PLoS One. 2014 Nov 3;9(11):e111667. doi: 10.1371/journal.pone.0111667. eCollection 2014.

17.

Improving soil bacterial taxa-area relationships assessment using DNA meta-barcoding.

Terrat S, Dequiedt S, Horrigue W, Lelievre M, Cruaud C, Saby NP, Jolivet C, Arrouays D, Maron PA, Ranjard L, Chemidlin Prévost-Bouré N.

Heredity (Edinb). 2015 May;114(5):468-75. doi: 10.1038/hdy.2014.91. Epub 2014 Oct 8.

18.

Meta-barcoded evaluation of the ISO standard 11063 DNA extraction procedure to characterize soil bacterial and fungal community diversity and composition.

Terrat S, Plassart P, Bourgeois E, Ferreira S, Dequiedt S, Adele-Dit-De-Renseville N, Lemanceau P, Bispo A, Chabbi A, Maron PA, Ranjard L.

Microb Biotechnol. 2015 Jan;8(1):131-42. doi: 10.1111/1751-7915.12162. Epub 2014 Sep 4.

19.

Comparison of the bacterial community structure within the equine hindgut and faeces using Automated Ribosomal Intergenic Spacer Analysis (ARISA).

Sadet-Bourgeteau S, Philippeau C, Dequiedt S, Julliand V.

Animal. 2014 Dec;8(12):1928-34. doi: 10.1017/S1751731114001943. Epub 2014 Jul 30.

PMID:
25075719
20.

Low occurrence of Pseudomonas aeruginosa in agricultural soils with and without organic amendment.

Deredjian A, Colinon C, Hien E, Brothier E, Youenou B, Cournoyer B, Dequiedt S, Hartmann A, Jolivet C, Houot S, Ranjard L, Saby NP, Nazaret S.

Front Cell Infect Microbiol. 2014 Apr 29;4:53. doi: 10.3389/fcimb.2014.00053. eCollection 2014.

21.

Nation-wide study of the occurrence of Listeria monocytogenes in French soils using culture-based and molecular detection methods.

Locatelli A, Depret G, Jolivet C, Henry S, Dequiedt S, Piveteau P, Hartmann A.

J Microbiol Methods. 2013 Jun;93(3):242-50. doi: 10.1016/j.mimet.2013.03.017. Epub 2013 Apr 6.

PMID:
23566826
22.

Turnover of soil bacterial diversity driven by wide-scale environmental heterogeneity.

Ranjard L, Dequiedt S, Chemidlin Prévost-Bouré N, Thioulouse J, Saby NP, Lelievre M, Maron PA, Morin FE, Bispo A, Jolivet C, Arrouays D, Lemanceau P.

Nat Commun. 2013;4:1434. doi: 10.1038/ncomms2431.

PMID:
23385579
23.

Evaluation of the ISO standard 11063 DNA extraction procedure for assessing soil microbial abundance and community structure.

Plassart P, Terrat S, Thomson B, Griffiths R, Dequiedt S, Lelievre M, Regnier T, Nowak V, Bailey M, Lemanceau P, Bispo A, Chabbi A, Maron PA, Mougel C, Ranjard L.

PLoS One. 2012;7(9):e44279. doi: 10.1371/journal.pone.0044279. Epub 2012 Sep 11.

24.

Molecular biomass and MetaTaxogenomic assessment of soil microbial communities as influenced by soil DNA extraction procedure.

Terrat S, Christen R, Dequiedt S, Lelièvre M, Nowak V, Regnier T, Bachar D, Plassart P, Wincker P, Jolivet C, Bispo A, Lemanceau P, Maron PA, Mougel C, Ranjard L.

Microb Biotechnol. 2012 Jan;5(1):135-41. doi: 10.1111/j.1751-7915.2011.00307.x. Epub 2011 Oct 12.

25.

Validation and application of a PCR primer set to quantify fungal communities in the soil environment by real-time quantitative PCR.

Chemidlin Prévost-Bouré N, Christen R, Dequiedt S, Mougel C, Lelièvre M, Jolivet C, Shahbazkia HR, Guillou L, Arrouays D, Ranjard L.

PLoS One. 2011;6(9):e24166. doi: 10.1371/journal.pone.0024166. Epub 2011 Sep 8.

26.

Determinants of the distribution of nitrogen-cycling microbial communities at the landscape scale.

Bru D, Ramette A, Saby NP, Dequiedt S, Ranjard L, Jolivet C, Arrouays D, Philippot L.

ISME J. 2011 Mar;5(3):532-42. doi: 10.1038/ismej.2010.130. Epub 2010 Aug 12.

27.

Biogeographical patterns of soil bacterial communities.

Dequiedt S, Thioulouse J, Jolivet C, Saby NP, Lelievre M, Maron PA, Martin MP, Prévost-Bouré NC, Toutain B, Arrouays D, Lemanceau P, Ranjard L.

Environ Microbiol Rep. 2009 Aug;1(4):251-5. doi: 10.1111/j.1758-2229.2009.00040.x. Epub 2009 Jun 22.

PMID:
23765854
28.

Platform GenoSol: a new tool for conserving and exploring soil microbial diversity.

Ranjard L, Dequiedt S, Lelievre M, Maron PA, Mougel C, Morin F, Lemanceau P.

Environ Microbiol Rep. 2009 Apr;1(2):97-9. doi: 10.1111/j.1758-2229.2009.00023.x. Epub 2009 Mar 3. No abstract available.

PMID:
23765739
29.

Response of soil bacterial community structure to successive perturbations of different types and intensities.

Bressan M, Mougel C, Dequiedt S, Maron PA, Lemanceau P, Ranjard L.

Environ Microbiol. 2008 Aug;10(8):2184-7. doi: 10.1111/j.1462-2920.2008.01641.x. Epub 2008 May 6.

PMID:
18462402

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