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Items: 24

1.

Distinguishing migration from isolation using genes with intragenic recombination: detecting introgression in the Drosophila simulans species complex.

Navascués M, Legrand D, Campagne C, Cariou ML, Depaulis F.

BMC Evol Biol. 2014 Apr 24;14:89. doi: 10.1186/1471-2148-14-89.

2.

Estimating the timing of mother-to-child transmission of the human immunodeficiency virus type 1 using a viral molecular evolution model.

Chaillon A, Samleerat T, Zoveda F, Ballesteros S, Moreau A, Ngo-Giang-Huong N, Jourdain G, Gianella S, Lallemant M, Depaulis F, Barin F.

PLoS One. 2014 Apr 9;9(4):e90421. doi: 10.1371/journal.pone.0090421. eCollection 2014.

3.

Rapid and sustained autologous neutralizing response leading to early spontaneous recovery after HCV infection.

Esteban-Riesco L, Depaulis F, Moreau A, Bacq Y, Dubois F, Goudeau A, Gaudy-Graffin C.

Virology. 2013 Sep;444(1-2):90-9. doi: 10.1016/j.virol.2013.05.037. Epub 2013 Jul 24.

4.

Evolution of neutral and flowering genes along pearl millet (Pennisetum glaucum) domestication.

Lakis G, Navascués M, Rekima S, Simon M, Remigereau MS, Leveugle M, Takvorian N, Lamy F, Depaulis F, Robert T.

PLoS One. 2012;7(5):e36642. doi: 10.1371/journal.pone.0036642. Epub 2012 May 14.

5.

Combining contemporary and ancient DNA in population genetic and phylogeographical studies.

Navascués M, Depaulis F, Emerson BC.

Mol Ecol Resour. 2010 Sep;10(5):760-72. doi: 10.1111/j.1755-0998.2010.02895.x. Epub 2010 Jul 8.

PMID:
21565088
6.

From grazing resistance to pathogenesis: the coincidental evolution of virulence factors.

Adiba S, Nizak C, van Baalen M, Denamur E, Depaulis F.

PLoS One. 2010 Aug 11;5(8):e11882. doi: 10.1371/journal.pone.0011882.

7.

[Hotspots of positive selection in primate genomes].

Enard D, Depaulis F, Roest Crollius H.

Med Sci (Paris). 2010 Jun-Jul;26(6-7):579-81. doi: 10.1051/medsci/2010266-7579. French. No abstract available.

8.

Human and non-human primate genomes share hotspots of positive selection.

Enard D, Depaulis F, Roest Crollius H.

PLoS Genet. 2010 Feb 5;6(2):e1000840. doi: 10.1371/journal.pgen.1000840.

9.

Using classical population genetics tools with heterochroneous data: time matters!

Depaulis F, Orlando L, Hänni C.

PLoS One. 2009;4(5):e5541. doi: 10.1371/journal.pone.0005541. Epub 2009 May 14.

10.

Experimental estimation of mutation rates in a wheat population with a gene genealogy approach.

Raquin AL, Depaulis F, Lambert A, Galic N, Brabant P, Goldringer I.

Genetics. 2008 Aug;179(4):2195-211. doi: 10.1534/genetics.107.071332. Epub 2008 Aug 9.

11.

Predation and disturbance interact to shape prey species diversity.

Gallet R, Alizon S, Comte PA, Gutierrez A, Depaulis F, van Baalen M, Michel E, Müller-Graf CD.

Am Nat. 2007 Jul;170(1):143-54. Epub 2007 May 11.

PMID:
17853998
12.

Power of neutrality tests to detect bottlenecks and hitchhiking.

Depaulis F, Mousset S, Veuille M.

J Mol Evol. 2003;57 Suppl 1:S190-200.

PMID:
15008416
13.

Effect of misoriented sites on neutrality tests with outgroup.

Baudry E, Depaulis F.

Genetics. 2003 Nov;165(3):1619-22.

14.

Evidence of a high rate of selective sweeps in African Drosophila melanogaster.

Mousset S, Brazier L, Cariou ML, Chartois F, Depaulis F, Veuille M.

Genetics. 2003 Feb;163(2):599-609.

15.

Neutral evolution in spatially continuous populations.

Barton NH, Depaulis F, Etheridge AM.

Theor Popul Biol. 2002 Feb;61(1):31-48.

PMID:
11895381
16.

Haplotype tests using coalescent simulations conditional on the number of segregating sites.

Depaulis F, Mousset S, Veuille M.

Mol Biol Evol. 2001 Jun;18(6):1136-8. No abstract available.

PMID:
11371602
17.

Inversion polymorphisms and nucleotide variability in Drosophila.

Andolfatto P, Depaulis F, Navarro A.

Genet Res. 2001 Feb;77(1):1-8. Review. No abstract available.

PMID:
11279826
18.

Selective sweep near the In(2L)t inversion breakpoint in an African population of Drosophila melanogaster.

Depaulis F, Brazier L, Mousset S, Turbe A, Veuille M.

Genet Res. 2000 Oct;76(2):149-58.

PMID:
11132408
19.

The population genetics of the origin and divergence of the Drosophila simulans complex species.

Kliman RM, Andolfatto P, Coyne JA, Depaulis F, Kreitman M, Berry AJ, McCarter J, Wakeley J, Hey J.

Genetics. 2000 Dec;156(4):1913-31.

20.

Detecting bottlenecks and selective sweeps from DNA sequence polymorphism.

Galtier N, Depaulis F, Barton NH.

Genetics. 2000 Jun;155(2):981-7.

22.

Partial sweeping of variation at the Fbp2 locus in a west African population of Drosophila melanogaster.

Bénassi V, Depaulis F, Meghlaoui GK, Veuille M.

Mol Biol Evol. 1999 Mar;16(3):347-53.

PMID:
10331261
23.

Neutrality tests based on the distribution of haplotypes under an infinite-site model.

Depaulis F, Veuille M.

Mol Biol Evol. 1998 Dec;15(12):1788-90. No abstract available.

PMID:
9917213
24.

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