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Divergent selection and genetic introgression shape the genome landscape of heterosis in hybrid rice.

Lin Z, Qin P, Zhang X, Fu C, Deng H, Fu X, Huang Z, Jiang S, Li C, Tang X, Wang X, He G, Yang Y, He H, Deng XW.

Proc Natl Acad Sci U S A. 2020 Feb 18. pii: 201919086. doi: 10.1073/pnas.1919086117. [Epub ahead of print]


GDSL esterase/lipases OsGELP34 and OsGELP110/OsGELP115 are essential for rice pollen development.

Zhang H, Wang M, Li Y, Yan W, Chang Z, Ni H, Chen Z, Wu J, Xu C, Deng XW, Tang X.

J Integr Plant Biol. 2020 Feb 18. doi: 10.1111/jipb.12919. [Epub ahead of print]


Identification of late-stage pollen-specific promoters for construction of pollen-inactivation system in rice.

Wang M, Yan W, Peng X, Chen Z, Xu C, Wu J, Deng XW, Tang X.

J Integr Plant Biol. 2020 Jan 22. doi: 10.1111/jipb.12912. [Epub ahead of print]


COP9 signalosome: Discovery, conservation, activity, and function.

Qin N, Xu D, Li J, Deng XW.

J Integr Plant Biol. 2020 Jan;62(1):90-103. doi: 10.1111/jipb.12903. Review.


[Vertical Distribution and Transport of PM2.5 During Heavy Pollution Events in the Jing-Jin-Ji Region].

Xiao ZM, Xu H, Li P, Tang M, Chen K, Yang N, Zheng NY, Yang W, Deng XW.

Huan Jing Ke Xue. 2019 Oct 8;40(10):4303-4309. doi: 10.13227/j.hjkx.201903111. Chinese.


[Secondary Inorganic Pollution Characteristics During Heavy Pollution Episodes of 2017 in Tianjin].

Xu H, Xiao ZM, Chen K, Li LW, Yang N, Gao JY, Li Y, Kong J, Bi WK, Deng XW.

Huan Jing Ke Xue. 2019 Jun 8;40(6):2519-2525. doi: 10.13227/j.hjkx.201810181. Chinese.


BBX4, a phyB-interacting and modulated regulator, directly interacts with PIF3 to fine tune red light-mediated photomorphogenesis.

Heng Y, Jiang Y, Zhao X, Zhou H, Wang X, Deng XW, Xu D.

Proc Natl Acad Sci U S A. 2019 Dec 17;116(51):26049-26056. doi: 10.1073/pnas.1915149116. Epub 2019 Nov 27. Erratum in: Proc Natl Acad Sci U S A. 2020 Feb 18;:.


The hybrid protein interactome contributes to rice heterosis as epistatic effects.

Li H, Jiang S, Li C, Liu L, Lin Z, He H, Deng XW, Zhang Z, Wang X.

Plant J. 2019 Nov 17. doi: 10.1111/tpj.14616. [Epub ahead of print]


Phytochrome B Induces Intron Retention and Translational Inhibition of PHYTOCHROME-INTERACTING FACTOR3.

Dong J, Chen H, Deng XW, Irish VF, Wei N.

Plant Physiol. 2020 Jan;182(1):159-166. doi: 10.1104/pp.19.00835. Epub 2019 Nov 5.


Arabidopsis PP6 phosphatases dephosphorylate PIF proteins to repress photomorphogenesis.

Yu X, Dong J, Deng Z, Jiang Y, Wu C, Qin X, Terzaghi W, Chen H, Dai M, Deng XW.

Proc Natl Acad Sci U S A. 2019 Oct 1;116(40):20218-20225. doi: 10.1073/pnas.1907540116. Epub 2019 Sep 16.


Inhibition of protein kinase C activity inhibits osteosarcoma metastasis.

Hu HJ, Deng XW, Li RX, Chen DW, Xue C.

Arch Med Sci. 2019 Jul;15(4):1028-1034. doi: 10.5114/aoms.2018.79450. Epub 2018 Nov 7.


Arabinogalactan protein-rare earth element complexes activate plant endocytosis.

Wang L, Cheng M, Yang Q, Li J, Wang X, Zhou Q, Nagawa S, Xia B, Xu T, Huang R, He J, Li C, Fu Y, Liu Y, Bao J, Wei H, Li H, Tan L, Gu Z, Xia A, Huang X, Yang Z, Deng XW.

Proc Natl Acad Sci U S A. 2019 Jul 9;116(28):14349-14357. doi: 10.1073/pnas.1902532116. Epub 2019 Jun 25.


Origin and Evolution of Core Components Responsible for Monitoring Light Environment Changes during Plant Terrestrialization.

Han X, Chang X, Zhang Z, Chen H, He H, Zhong B, Deng XW.

Mol Plant. 2019 Jun 3;12(6):847-862. doi: 10.1016/j.molp.2019.04.006. Epub 2019 Apr 19.


Locoregional Control and Mild Late Toxicity After Reducing Target Volumes and Radiation Doses in Patients With Locoregionally Advanced Nasopharyngeal Carcinoma Treated With Induction Chemotherapy (IC) Followed by Concurrent Chemoradiotherapy: 10-Year Results of a Phase 2 Study.

Zhao C, Miao JJ, Hua YJ, Wang L, Han F, Lu LX, Xiao WW, Wu HJ, Zhu MY, Huang SM, Lin CG, Deng XW, Xie CH.

Int J Radiat Oncol Biol Phys. 2019 Jul 15;104(4):836-844. doi: 10.1016/j.ijrobp.2019.03.043. Epub 2019 Apr 5.


The Transcription Factors TCP4 and PIF3 Antagonistically Regulate Organ-Specific Light Induction of SAUR Genes to Modulate Cotyledon Opening during De-Etiolation in Arabidopsis.

Dong J, Sun N, Yang J, Deng Z, Lan J, Qin G, He H, Deng XW, Irish VF, Chen H, Wei N.

Plant Cell. 2019 May;31(5):1155-1170. doi: 10.1105/tpc.18.00803. Epub 2019 Mar 25.


[Association of Body Mass Index and Risk Stratification of Thyroid Nodules in a Multi-center Healthy Population].

Wang Y, Lai XJ, Yang X, Deng XW, Jiang SQ, Yang XW, Tang SQ, Wang J, Ma CM, Li L, Zhang B.

Zhongguo Yi Xue Ke Xue Yuan Xue Bao. 2019 Feb 28;41(1):93-98. doi: 10.3881/j.issn.1000-503X.10416. Chinese.


Two E3 ligases antagonistically regulate the UV-B response in Arabidopsis.

Ren H, Han J, Yang P, Mao W, Liu X, Qiu L, Qian C, Liu Y, Chen Z, Ouyang X, Chen X, Deng XW, Huang X.

Proc Natl Acad Sci U S A. 2019 Mar 5;116(10):4722-4731. doi: 10.1073/pnas.1816268116. Epub 2019 Feb 20.


B-Box Containing Proteins BBX30 and BBX31, Acting Downstream of HY5, Negatively Regulate Photomorphogenesis in Arabidopsis.

Heng Y, Lin F, Jiang Y, Ding M, Yan T, Lan H, Zhou H, Zhao X, Xu D, Deng XW.

Plant Physiol. 2019 May;180(1):497-508. doi: 10.1104/pp.18.01244. Epub 2019 Feb 14.


Long-term outcome and pattern of failure for patients with nasopharyngeal carcinoma treated with intensity-modulated radiotherapy.

Tian YM, Liu MZ, Zeng L, Bai L, Lin CG, Huang SM, Deng XW, Chong-Zhao, Lu TX, Han F.

Head Neck. 2019 May;41(5):1246-1252. doi: 10.1002/hed.25545. Epub 2018 Dec 28.


Efficacy and safety of primary surgery with postoperative radiotherapy in head and neck mucosal melanoma: a single-arm Phase II study.

Yao JJ, Zhang F, Zhang GS, Deng XW, Zhang WJ, Lawrence WR, Zou L, Zhang XS, Lu LX.

Cancer Manag Res. 2018 Dec 14;10:6985-6996. doi: 10.2147/CMAR.S185017. eCollection 2018.


A new regulator of seed size control in Arabidopsis identified by a genome-wide association study.

Ren D, Wang X, Yang M, Yang L, He G, Deng XW.

New Phytol. 2019 Apr;222(2):895-906. doi: 10.1111/nph.15642. Epub 2019 Feb 2.


Development of the "Third-Generation" Hybrid Rice in China.

Wang H, Deng XW.

Genomics Proteomics Bioinformatics. 2018 Dec;16(6):393-396. doi: 10.1016/j.gpb.2018.12.001. Epub 2018 Dec 13.


Hinge region of Arabidopsis phyA plays an important role in regulating phyA function.

Zhou Y, Yang L, Duan J, Cheng J, Shen Y, Wang X, Han R, Li H, Li Z, Wang L, Terzaghi W, Zhu D, Chen H, Deng XW, Li J.

Proc Natl Acad Sci U S A. 2018 Dec 11;115(50):E11864-E11873. doi: 10.1073/pnas.1813162115. Epub 2018 Nov 26.


Cis-regulated alternative splicing divergence and its potential contribution to environmental responses in Arabidopsis.

Wang X, Yang M, Ren D, Terzaghi W, Deng XW, He G.

Plant J. 2019 Feb;97(3):555-570. doi: 10.1111/tpj.14142. Epub 2018 Dec 14.


COP1 SUPPRESSOR 4 promotes seedling photomorphogenesis by repressing CCA1 and PIF4 expression in Arabidopsis.

Zhao X, Jiang Y, Li J, Huq E, Chen ZJ, Xu D, Deng XW.

Proc Natl Acad Sci U S A. 2018 Nov 6;115(45):11631-11636. doi: 10.1073/pnas.1813171115. Epub 2018 Oct 23.


Comparison of treatment plan quality of VMAT for esophageal carcinoma with: flattening filter beam versus flattening filter free beam.

Sun WZ, Chen L, Yang X, Wang B, Deng XW, Huang XY.

J Cancer. 2018 Sep 7;9(18):3263-3268. doi: 10.7150/jca.26044. eCollection 2018.


B-BOX DOMAIN PROTEIN28 Negatively Regulates Photomorphogenesis by Repressing the Activity of Transcription Factor HY5 and Undergoes COP1-Mediated Degradation.

Lin F, Jiang Y, Li J, Yan T, Fan L, Liang J, Chen ZJ, Xu D, Deng XW.

Plant Cell. 2018 Sep;30(9):2006-2019. doi: 10.1105/tpc.18.00226. Epub 2018 Aug 10.


A retrospective study of traditional Chinese medicine as an adjunctive therapy for patients with chronic heart failure.

Sui YB, Liu L, Tian QY, Deng XW, Zhang YQ, Li ZG.

Medicine (Baltimore). 2018 Jul;97(30):e11696. doi: 10.1097/MD.0000000000011696.


Dosimetric Effects of Head and Neck Immobilization Devices on Multi-field Intensity Modulated Radiation Therapy for Nasopharyngeal Carcinoma.

Chen L, Peng YL, Gu SY, Shen H, Zhang DD, Sun WZ, Wu JH, Deng XW.

J Cancer. 2018 Jun 14;9(14):2443-2450. doi: 10.7150/jca.24887. eCollection 2018.


Correction to: Retrospective dosimetry study of intensity-modulated radiation therapy for nasopharyngeal carcinoma: measurement-guided dose reconstruction and analysis.

Sun WZ, Zhang DD, Peng YL, Chen L, Kang DH, Wang B, Deng XW.

Radiat Oncol. 2018 Jun 25;13(1):117. doi: 10.1186/s13014-018-1058-2.


Interobserver variations in the delineation of target volumes and organs at risk and their impact on dose distribution in intensity-modulated radiation therapy for nasopharyngeal carcinoma.

Peng YL, Chen L, Shen GZ, Li YN, Yao JJ, Xiao WW, Yang L, Zhou S, Li JX, Cheng WQ, Guan Y, Xia HQ, Liu S, Zhao C, Deng XW.

Oral Oncol. 2018 Jul;82:1-7. doi: 10.1016/j.oraloncology.2018.04.025. Epub 2018 May 3.


Improved de novo genome assembly and analysis of the Chinese cucurbit Siraitia grosvenorii, also known as monk fruit or luo-han-guo.

Xia M, Han X, He H, Yu R, Zhen G, Jia X, Cheng B, Deng XW.

Gigascience. 2018 Jun 1;7(6). doi: 10.1093/gigascience/giy067.


Genome-wide regulation of light-controlled seedling morphogenesis by three families of transcription factors.

Shi H, Lyu M, Luo Y, Liu S, Li Y, He H, Wei N, Deng XW, Zhong S.

Proc Natl Acad Sci U S A. 2018 Jun 19;115(25):6482-6487. doi: 10.1073/pnas.1803861115. Epub 2018 May 29.


Radiotherapy is essential after complete response to asparaginase-containing chemotherapy in early-stage extranodal nasal-type NK/T-cell lymphoma: A multicenter study from the China Lymphoma Collaborative Group (CLCG).

Deng XW, Wu JX, Wu T, Zhu SY, Shi M, Su H, Wang Y, He X, Xu LM, Yuan ZY, Zhang LL, Wu G, Qu BL, Qian LT, Hou XR, Zhang FQ, Zhang YJ, Zhu Y, Cao JZ, Lan SM, Dong M, Qi SN, Yang Y, Li YX.

Radiother Oncol. 2018 Oct;129(1):3-9. doi: 10.1016/j.radonc.2018.04.026. Epub 2018 May 5.


Diurnal down-regulation of ethylene biosynthesis mediates biomass heterosis.

Song Q, Ando A, Xu D, Fang L, Zhang T, Huq E, Qiao H, Deng XW, Chen ZJ.

Proc Natl Acad Sci U S A. 2018 May 22;115(21):5606-5611. doi: 10.1073/pnas.1722068115. Epub 2018 May 7.


TANDEM ZINC-FINGER/PLUS3 Is a Key Component of Phytochrome A Signaling.

Zhang S, Li C, Zhou Y, Wang X, Li H, Feng Z, Chen H, Qin G, Jin D, Terzaghi W, Gu H, Qu LJ, Kang D, Deng XW, Li J.

Plant Cell. 2018 Apr;30(4):835-852. doi: 10.1105/tpc.17.00677. Epub 2018 Mar 27.


Prospective matched study on comparison of volumetric-modulated arc therapy and intensity-modulated radiotherapy for nasopharyngeal carcinoma: dosimetry, delivery efficiency and outcomes.

Chen BB, Huang SM, Xiao WW, Sun WZ, Liu MZ, Lu TX, Deng XW, Han F.

J Cancer. 2018 Feb 28;9(6):978-986. doi: 10.7150/jca.22843. eCollection 2018.


Retrospective dosimetry study of intensity-modulated radiation therapy for nasopharyngeal carcinoma: measurement-guided dose reconstruction and analysis.

Sun WZ, Zhang DD, Peng YL, Chen L, Kang DH, Wang B, Deng XW.

Radiat Oncol. 2018 Mar 15;13(1):42. doi: 10.1186/s13014-018-0993-2. Erratum in: Radiat Oncol. 2018 Jun 25;13(1):117.


The COP9 Signalosome regulates seed germination by facilitating protein degradation of RGL2 and ABI5.

Jin D, Wu M, Li B, B├╝cker B, Keil P, Zhang S, Li J, Kang D, Liu J, Dong J, Deng XW, Irish V, Wei N.

PLoS Genet. 2018 Feb 20;14(2):e1007237. doi: 10.1371/journal.pgen.1007237. eCollection 2018 Feb.


The B-Box Domain Protein BBX21 Promotes Photomorphogenesis.

Xu D, Jiang Y, Li J, Holm M, Deng XW.

Plant Physiol. 2018 Mar;176(3):2365-2375. doi: 10.1104/pp.17.01305. Epub 2017 Dec 19.


Arabidopsis noncoding RNA modulates seedling greening during deetiolation.

Wang Y, Li J, Deng XW, Zhu D.

Sci China Life Sci. 2018 Feb;61(2):199-203. doi: 10.1007/s11427-017-9187-9. Epub 2017 Oct 13.


Poaceae-specific MS1 encodes a phospholipid-binding protein for male fertility in bread wheat.

Wang Z, Li J, Chen S, Heng Y, Chen Z, Yang J, Zhou K, Pei J, He H, Deng XW, Ma L.

Proc Natl Acad Sci U S A. 2017 Nov 21;114(47):12614-12619. doi: 10.1073/pnas.1715570114. Epub 2017 Nov 6.


Reply to Jin and Zhu: PINOID-mediated COP1 phosphorylation matters in photomorphogenesis in Arabidopsis.

Xu D, Deng XW.

Proc Natl Acad Sci U S A. 2017 Sep 26;114(39):E8136-E8137. doi: 10.1073/pnas.1712385114. Epub 2017 Sep 14. No abstract available.


Genome-wide dissection of heterosis for yield traits in two-line hybrid rice populations.

Zhen G, Qin P, Liu KY, Nie DY, Yang YZ, Deng XW, He H.

Sci Rep. 2017 Aug 9;7(1):7635. doi: 10.1038/s41598-017-06742-7.


Light-Dependent Degradation of PIF3 by SCFEBF1/2 Promotes a Photomorphogenic Response in Arabidopsis.

Dong J, Ni W, Yu R, Deng XW, Chen H, Wei N.

Curr Biol. 2017 Aug 21;27(16):2420-2430.e6. doi: 10.1016/j.cub.2017.06.062. Epub 2017 Jul 20.


Genomic architecture of biomass heterosis in Arabidopsis.

Yang M, Wang X, Ren D, Huang H, Xu M, He G, Deng XW.

Proc Natl Acad Sci U S A. 2017 Jul 25;114(30):8101-8106. doi: 10.1073/pnas.1705423114. Epub 2017 Jul 10.


Protosappanin a inhibits osteoclastogenesis via reducing oxidative stress in RAW264.7 cells.

Huang Q, Meng RY, Yang YW, Li M, Wang F, Shen WW, Deng XW, Zhou SG, Xue Y, Gao QM.

Int J Clin Exp Pathol. 2017 Jul 1;10(7):7498-7510. eCollection 2017.


Phosphorylation and negative regulation of CONSTITUTIVELY PHOTOMORPHOGENIC 1 by PINOID in Arabidopsis.

Lin F, Xu D, Jiang Y, Chen H, Fan L, Holm M, Deng XW.

Proc Natl Acad Sci U S A. 2017 Jun 20;114(25):6617-6622. doi: 10.1073/pnas.1702984114. Epub 2017 Jun 5.


Noncanonical role of Arabidopsis COP1/SPA complex in repressing BIN2-mediated PIF3 phosphorylation and degradation in darkness.

Ling JJ, Li J, Zhu D, Deng XW.

Proc Natl Acad Sci U S A. 2017 Mar 28;114(13):3539-3544. doi: 10.1073/pnas.1700850114. Epub 2017 Mar 14.


Simultaneous Identification of Multiple Causal Mutations in Rice.

Yan W, Chen Z, Lu J, Xu C, Xie G, Li Y, Deng XW, He H, Tang X.

Front Plant Sci. 2017 Jan 17;7:2055. doi: 10.3389/fpls.2016.02055. eCollection 2016.

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