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Items: 11

1.

Implementation of a Multiplex and Quantitative Proteomics Platform for Assessing Protein Lysates Using DNA-Barcoded Antibodies.

Lee J, Geiss GK, Demirkan G, Vellano CP, Filanoski B, Lu Y, Ju Z, Yu S, Guo H, Bogatzki LY, Carter W, Meredith RK, Krishnamurthy S, Ding Z, Beechem JM, Mills GB.

Mol Cell Proteomics. 2018 Jun;17(6):1245-1258. doi: 10.1074/mcp.RA117.000291. Epub 2018 Mar 12.

PMID:
29531020
2.

Automatic Identification and Quantification of Extra-Well Fluorescence in Microarray Images.

Rivera R, Wang J, Yu X, Demirkan G, Hopper M, Bian X, Tahsin T, Magee DM, Qiu J, LaBaer J, Wallstrom G.

J Proteome Res. 2017 Nov 3;16(11):3969-3977. doi: 10.1021/acs.jproteome.7b00267. Epub 2017 Oct 10.

PMID:
28938071
3.

Identification of Antibody Against SNRPB, Small Nuclear Ribonucleoprotein-Associated Proteins B and B', as an Autoantibody Marker in Crohn's Disease using an Immunoproteomics Approach.

Wang H, Demirkan G, Bian X, Wallstrom G, Barker K, Karthikeyan K, Tang Y, Pasha SF, Leighton JA, Qiu J, LaBaer J.

J Crohns Colitis. 2017 Jul 1;11(7):848-856. doi: 10.1093/ecco-jcc/jjx019.

PMID:
28204086
4.

Plasma Autoantibodies Associated with Basal-like Breast Cancers.

Wang J, Figueroa JD, Wallstrom G, Barker K, Park JG, Demirkan G, Lissowska J, Anderson KS, Qiu J, LaBaer J.

Cancer Epidemiol Biomarkers Prev. 2015 Sep;24(9):1332-40. doi: 10.1158/1055-9965.EPI-15-0047. Epub 2015 Jun 12.

5.

Copper-catalyzed azide-alkyne cycloaddition (click chemistry)-based detection of global pathogen-host AMPylation on self-assembled human protein microarrays.

Yu X, Woolery AR, Luong P, Hao YH, Grammel M, Westcott N, Park J, Wang J, Bian X, Demirkan G, Hang HC, Orth K, LaBaer J.

Mol Cell Proteomics. 2014 Nov;13(11):3164-76. doi: 10.1074/mcp.M114.041103. Epub 2014 Jul 29.

6.

Hepatic signaling by the mechanistic target of rapamycin complex 2 (mTORC2).

Lamming DW, Demirkan G, Boylan JM, Mihaylova MM, Peng T, Ferreira J, Neretti N, Salomon A, Sabatini DM, Gruppuso PA.

FASEB J. 2014 Jan;28(1):300-15. doi: 10.1096/fj.13-237743. Epub 2013 Sep 26.

7.

Phosphoproteomic analysis of liver homogenates.

Demirkan G, Salomon AR, Gruppuso PA.

Methods Mol Biol. 2012;909:151-63. doi: 10.1007/978-1-61779-959-4_11.

8.

Phosphoproteomic profiling of in vivo signaling in liver by the mammalian target of rapamycin complex 1 (mTORC1).

Demirkan G, Yu K, Boylan JM, Salomon AR, Gruppuso PA.

PLoS One. 2011;6(6):e21729. doi: 10.1371/journal.pone.0021729. Epub 2011 Jun 28.

9.

Next-generation high-density self-assembling functional protein arrays.

Ramachandran N, Raphael JV, Hainsworth E, Demirkan G, Fuentes MG, Rolfs A, Hu Y, LaBaer J.

Nat Methods. 2008 Jun;5(6):535-8. doi: 10.1038/nmeth.1210. Epub 2008 May 11.

10.

Application of protein microarrays for multiplexed detection of antibodies to tumor antigens in breast cancer.

Anderson KS, Ramachandran N, Wong J, Raphael JV, Hainsworth E, Demirkan G, Cramer D, Aronzon D, Hodi FS, Harris L, Logvinenko T, LaBaer J.

J Proteome Res. 2008 Apr;7(4):1490-9. doi: 10.1021/pr700804c. Epub 2008 Feb 27.

11.

On-chip protein synthesis for making microarrays.

Ramachandran N, Hainsworth E, Demirkan G, LaBaer J.

Methods Mol Biol. 2006;328:1-14.

PMID:
16785638

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