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Items: 1 to 50 of 135

1.

Wide transcriptional investigation unravel novel insights of the on-tree maturation and postharvest ripening of 'Abate Fetel' pear fruit.

Busatto N, Farneti B, Tadiello A, Oberkofler V, Cellini A, Biasioli F, Delledonne M, Cestaro A, Noutsos C, Costa F.

Hortic Res. 2019 Mar 1;6:32. doi: 10.1038/s41438-018-0115-1. eCollection 2019.

2.

Insertional translocation involving an additional nonchromothriptic chromosome in constitutional chromothripsis: Rule or exception?

Kurtas NE, Xumerle L, Giussani U, Pansa A, Cardarelli L, Bertini V, Valetto A, Liehr T, Clara Bonaglia M, Errichiello E, Delledonne M, Zuffardi O.

Mol Genet Genomic Med. 2019 Feb;7(2):e00496. doi: 10.1002/mgg3.496. Epub 2018 Dec 18.

3.

Role of phage ϕ1 in two strains of Salmonella Rissen, sensitive and resistant to phage ϕ1.

Papaianni M, Contaldi F, Fulgione A, Woo SL, Casillo A, Corsaro MM, Parrilli E, Marcolungo L, Rossato M, Delledonne M, Garonzi M, Iannelli D, Capparelli R.

BMC Microbiol. 2018 Dec 7;18(1):208. doi: 10.1186/s12866-018-1360-z.

4.

Genomic dissection of pod shattering in common bean: mutations at non-orthologous loci at the basis of convergent phenotypic evolution under domestication of leguminous species.

Rau D, Murgia ML, Rodriguez M, Bitocchi E, Bellucci E, Fois D, Albani D, Nanni L, Gioia T, Santo D, Marcolungo L, Delledonne M, Attene G, Papa R.

Plant J. 2019 Feb;97(4):693-714. doi: 10.1111/tpj.14155. Epub 2019 Jan 12.

PMID:
30422331
5.

Small supernumerary marker chromosomes: A legacy of trisomy rescue?

Kurtas NE, Xumerle L, Leonardelli L, Delledonne M, Brusco A, Chrzanowska K, Schinzel A, Larizza D, Guerneri S, Natacci F, Bonaglia MC, Reho P, Manolakos E, Mattina T, Soli F, Provenzano A, Al-Rikabi AH, Errichiello E, Nazaryan-Petersen L, Giglio S, Tommerup N, Liehr T, Zuffardi O.

Hum Mutat. 2019 Feb;40(2):193-200. doi: 10.1002/humu.23683. Epub 2018 Nov 22.

PMID:
30412329
6.

The genome assembly of the fungal pathogen Pyrenochaeta lycopersici from Single-Molecule Real-Time sequencing sheds new light on its biological complexity.

Dal Molin A, Minio A, Griggio F, Delledonne M, Infantino A, Aragona M.

PLoS One. 2018 Jul 6;13(7):e0200217. doi: 10.1371/journal.pone.0200217. eCollection 2018.

7.

Centrosome Linker-induced Tetraploid Segregation Errors Link Rhabdoid Phenotypes and Lethal Colorectal Cancers.

Remo A, Manfrin E, Parcesepe P, Ferrarini A, Han HS, Mickys U, Laudanna C, Simbolo M, Malanga D, Oliveira DM, Baritono E, Colangelo T, Sabatino L, Giuliani J, Molinari E, Garonzi M, Xumerle L, Delledonne M, Giordano G, Ghimenton C, Lonardo F, D'angelo F, Grillo F, Mastracci L, Viglietto G, Ceccarelli M, Colantuoni V, Scarpa A, Pancione M.

Mol Cancer Res. 2018 Sep;16(9):1385-1395. doi: 10.1158/1541-7786.MCR-18-0062. Epub 2018 May 21.

PMID:
29784668
8.

Characterization of a new B-ALL cell line with constitutional defect of the Notch signaling pathway.

Kamga PT, Dal Collo G, Bassi G, Midolo M, Delledonne M, Chilosi M, Bonifacio M, Krampera M.

Oncotarget. 2018 Apr 6;9(26):18341-18350. doi: 10.18632/oncotarget.24836. eCollection 2018 Apr 6.

9.

Molecular basis of autotrophic vs mixotrophic growth in Chlorella sorokiniana.

Cecchin M, Benfatto S, Griggio F, Mori A, Cazzaniga S, Vitulo N, Delledonne M, Ballottari M.

Sci Rep. 2018 Apr 24;8(1):6465. doi: 10.1038/s41598-018-24979-8.

10.

Rise and fall of outbreak-specific clone inside endemic pulsotype of Salmonella 4,[5],12:i:-; insights from high-resolution molecular surveillance in Emilia-Romagna, Italy, 2012 to 2015.

Morganti M, Bolzoni L, Scaltriti E, Casadei G, Carra E, Rossi L, Gherardi P, Faccini F, Arrigoni N, Sacchi AR, Delledonne M, Pongolini S.

Euro Surveill. 2018 Mar;23(13). doi: 10.2807/1560-7917.ES.2018.23.13.17-00375.

11.

Correction: The Sulfated Laminarin Triggers a Stress Transcriptome before Priming the SA- and ROS-Dependent Defenses during Grapevine's Induced Resistance against Plasmopara viticola.

Gauthier A, Trouvelot S, Kelloniemi J, Frettinger P, Wendehenne D, Daire X, Joubert JM, Ferrarini A, Delledonne M, Flors V, Poinssot B.

PLoS One. 2018 Mar 8;13(3):e0194327. doi: 10.1371/journal.pone.0194327. eCollection 2018.

12.

Chromothripsis and ring chromosome 22: a paradigm of genomic complexity in the Phelan-McDermid syndrome (22q13 deletion syndrome).

Kurtas N, Arrigoni F, Errichiello E, Zucca C, Maghini C, D'Angelo MG, Beri S, Giorda R, Bertuzzo S, Delledonne M, Xumerle L, Rossato M, Zuffardi O, Bonaglia MC.

J Med Genet. 2018 Apr;55(4):269-277. doi: 10.1136/jmedgenet-2017-105125. Epub 2018 Jan 29.

13.

SOX2: Not always eye malformations. Severe genital but no major ocular anomalies in a female patient with the recurrent c.70del20 variant.

Errichiello E, Gorgone C, Giuliano L, Iadarola B, Cosentino E, Rossato M, Kurtas NE, Delledonne M, Mattina T, Zuffardi O.

Eur J Med Genet. 2018 Jun;61(6):335-340. doi: 10.1016/j.ejmg.2018.01.011. Epub 2018 Jan 31.

PMID:
29371155
14.

Hybrid genome assembly and annotation of Paenibacillus pasadenensis strain R16 reveals insights on endophytic life style and antifungal activity.

Passera A, Marcolungo L, Casati P, Brasca M, Quaglino F, Cantaloni C, Delledonne M.

PLoS One. 2018 Jan 19;13(1):e0189993. doi: 10.1371/journal.pone.0189993. eCollection 2018.

15.

Whole-genome sequencing and SNV genotyping of 'Nebbiolo' (Vitis vinifera L.) clones.

Gambino G, Dal Molin A, Boccacci P, Minio A, Chitarra W, Avanzato CG, Tononi P, Perrone I, Raimondi S, Schneider A, Pezzotti M, Mannini F, Gribaudo I, Delledonne M.

Sci Rep. 2017 Dec 11;7(1):17294. doi: 10.1038/s41598-017-17405-y.

16.

Apple fruit superficial scald resistance mediated by ethylene inhibition is associated with diverse metabolic processes.

Busatto N, Farneti B, Commisso M, Bianconi M, Iadarola B, Zago E, Ruperti B, Spinelli F, Zanella A, Velasco R, Ferrarini A, Chitarrini G, Vrhovsek U, Delledonne M, Guzzo F, Costa G, Costa F.

Plant J. 2018 Jan;93(2):270-285. doi: 10.1111/tpj.13774. Epub 2017 Dec 22.

17.

Host-Mediated S-Nitrosylation Disarms the Bacterial Effector HopAI1 to Reestablish Immunity.

Ling T, Bellin D, Vandelle E, Imanifard Z, Delledonne M.

Plant Cell. 2017 Nov;29(11):2871-2881. doi: 10.1105/tpc.16.00557. Epub 2017 Oct 30.

18.

On site DNA barcoding by nanopore sequencing.

Menegon M, Cantaloni C, Rodriguez-Prieto A, Centomo C, Abdelfattah A, Rossato M, Bernardi M, Xumerle L, Loader S, Delledonne M.

PLoS One. 2017 Oct 4;12(10):e0184741. doi: 10.1371/journal.pone.0184741. eCollection 2017.

19.

The Networks of Genes Encoding Palmitoylated Proteins in Axonal and Synaptic Compartments Are Affected in PPT1 Overexpressing Neuronal-Like Cells.

Pezzini F, Bianchi M, Benfatto S, Griggio F, Doccini S, Carrozzo R, Dapkunas A, Delledonne M, Santorelli FM, Lalowski MM, Simonati A.

Front Mol Neurosci. 2017 Aug 22;10:266. doi: 10.3389/fnmol.2017.00266. eCollection 2017.

20.

Physical Activity and Nutrition INfluences In ageing (PANINI): consortium mission statement.

Whittaker AC, Delledonne M, Finni T, Garagnani P, Greig C, Kallen V, Kokko K, Lord J, Maier AB, Meskers CGM, Santos NC, Sipila S, Thompson JL, van Riel N.

Aging Clin Exp Res. 2018 Jun;30(6):685-692. doi: 10.1007/s40520-017-0823-7. Epub 2017 Sep 1. No abstract available.

21.

Investigation of orthologous pathogen recognition gene-rich regions in solanaceous species.

Di Donato A, Andolfo G, Ferrarini A, Delledonne M, Ercolano MR.

Genome. 2017 Oct;60(10):850-859. doi: 10.1139/gen-2016-0217. Epub 2017 Jul 25.

PMID:
28742982
22.

SETD2 and histone H3 lysine 36 methylation deficiency in advanced systemic mastocytosis.

Martinelli G, Mancini M, De Benedittis C, Rondoni M, Papayannidis C, Manfrini M, Meggendorfer M, Calogero R, Guadagnuolo V, Fontana MC, Bavaro L, Padella A, Zago E, Pagano L, Zanotti R, Scaffidi L, Specchia G, Albano F, Merante S, Elena C, Savini P, Gangemi D, Tosi P, Ciceri F, Poletti G, Riccioni L, Morigi F, Delledonne M, Haferlach T, Cavo M, Valent P, Soverini S.

Leukemia. 2018 Jan;32(1):139-148. doi: 10.1038/leu.2017.183. Epub 2017 Jun 16.

23.

Grapevine Grafting: Scion Transcript Profiling and Defense-Related Metabolites Induced by Rootstocks.

Chitarra W, Perrone I, Avanzato CG, Minio A, Boccacci P, Santini D, Gilardi G, Siciliano I, Gullino ML, Delledonne M, Mannini F, Gambino G.

Front Plant Sci. 2017 Apr 27;8:654. doi: 10.3389/fpls.2017.00654. eCollection 2017.

24.

Physiological and Biochemical Analyses Shed Light on the Response of Sargassum vulgare to Ocean Acidification at Different Time Scales.

Kumar A, AbdElgawad H, Castellano I, Lorenti M, Delledonne M, Beemster GTS, Asard H, Buia MC, Palumbo A.

Front Plant Sci. 2017 Apr 19;8:570. doi: 10.3389/fpls.2017.00570. eCollection 2017.

25.

Unraveling the complexity of transcriptomic, metabolomic and quality environmental response of tomato fruit.

D'Esposito D, Ferriello F, Molin AD, Diretto G, Sacco A, Minio A, Barone A, Di Monaco R, Cavella S, Tardella L, Giuliano G, Delledonne M, Frusciante L, Ercolano MR.

BMC Plant Biol. 2017 Mar 28;17(1):66. doi: 10.1186/s12870-017-1008-4.

26.

Identification of new BMP6 pro-peptide mutations in patients with iron overload.

Piubelli C, Castagna A, Marchi G, Rizzi M, Busti F, Badar S, Marchetti M, De Gobbi M, Roetto A, Xumerle L, Suku E, Giorgetti A, Delledonne M, Olivieri O, Girelli D.

Am J Hematol. 2017 Jun;92(6):562-568. doi: 10.1002/ajh.24730. Epub 2017 Apr 29.

27.

Centenarians as extreme phenotypes: An ecological perspective to get insight into the relationship between the genetics of longevity and age-associated diseases.

Giuliani C, Pirazzini C, Delledonne M, Xumerle L, Descombes P, Marquis J, Mengozzi G, Monti D, Bellizzi D, Passarino G, Luiselli D, Franceschi C, Garagnani P.

Mech Ageing Dev. 2017 Jul;165(Pt B):195-201. doi: 10.1016/j.mad.2017.02.007. Epub 2017 Feb 27. Review.

PMID:
28242236
28.

Optimized pipeline of MuTect and GATK tools to improve the detection of somatic single nucleotide polymorphisms in whole-exome sequencing data.

do Valle ÍF, Giampieri E, Simonetti G, Padella A, Manfrini M, Ferrari A, Papayannidis C, Zironi I, Garonzi M, Bernardi S, Delledonne M, Martinelli G, Remondini D, Castellani G.

BMC Bioinformatics. 2016 Nov 8;17(Suppl 12):341. doi: 10.1186/s12859-016-1190-7.

29.

Molecular response of Sargassum vulgare to acidification at volcanic CO2 vents: insights from de novo transcriptomic analysis.

Kumar A, Castellano I, Patti FP, Delledonne M, Abdelgawad H, Beemster GTS, Asard H, Palumbo A, Buia MC.

Mol Ecol. 2017 Apr;26(8):2276-2290. doi: 10.1111/mec.14034. Epub 2017 Mar 6.

PMID:
28133853
30.

Phased diploid genome assembly with single-molecule real-time sequencing.

Chin CS, Peluso P, Sedlazeck FJ, Nattestad M, Concepcion GT, Clum A, Dunn C, O'Malley R, Figueroa-Balderas R, Morales-Cruz A, Cramer GR, Delledonne M, Luo C, Ecker JR, Cantu D, Rank DR, Schatz MC.

Nat Methods. 2016 Dec;13(12):1050-1054. doi: 10.1038/nmeth.4035. Epub 2016 Oct 17.

31.

Palmoplantar keratoderma and Charcot-Marie-Tooth disease: combination of two independent genetic diseases? Identification of two point mutations in the MPZ and KRT1 genes by whole-exome sequencing.

Gagliardi S, Ricca I, Ferrarini A, Valente M, Grieco GS, Piccolo G, Alfonsi E, Delledonne M, Cereda C.

Br J Dermatol. 2017 Jul;177(1):284-286. doi: 10.1111/bjd.15066. Epub 2017 Jun 14. No abstract available.

PMID:
27639257
32.

Interference with ethylene perception at receptor level sheds light on auxin and transcriptional circuits associated with the climacteric ripening of apple fruit (Malus x domestica Borkh.).

Tadiello A, Longhi S, Moretto M, Ferrarini A, Tononi P, Farneti B, Busatto N, Vrhovsek U, Molin AD, Avanzato C, Biasioli F, Cappellin L, Scholz M, Velasco R, Trainotti L, Delledonne M, Costa F.

Plant J. 2016 Dec;88(6):963-975. doi: 10.1111/tpj.13306. Epub 2016 Oct 5.

33.

Transcriptomic Profiling Discloses Molecular and Cellular Events Related to Neuronal Differentiation in SH-SY5Y Neuroblastoma Cells.

Pezzini F, Bettinetti L, Di Leva F, Bianchi M, Zoratti E, Carrozzo R, Santorelli FM, Delledonne M, Lalowski M, Simonati A.

Cell Mol Neurobiol. 2017 May;37(4):665-682. doi: 10.1007/s10571-016-0403-y. Epub 2016 Jul 15.

PMID:
27422411
34.

Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida.

Bombarely A, Moser M, Amrad A, Bao M, Bapaume L, Barry CS, Bliek M, Boersma MR, Borghi L, Bruggmann R, Bucher M, D'Agostino N, Davies K, Druege U, Dudareva N, Egea-Cortines M, Delledonne M, Fernandez-Pozo N, Franken P, Grandont L, Heslop-Harrison JS, Hintzsche J, Johns M, Koes R, Lv X, Lyons E, Malla D, Martinoia E, Mattson NS, Morel P, Mueller LA, Muhlemann J, Nouri E, Passeri V, Pezzotti M, Qi Q, Reinhardt D, Rich M, Richert-Pöggeler KR, Robbins TP, Schatz MC, Schranz ME, Schuurink RC, Schwarzacher T, Spelt K, Tang H, Urbanus SL, Vandenbussche M, Vijverberg K, Villarino GH, Warner RM, Weiss J, Yue Z, Zethof J, Quattrocchio F, Sims TL, Kuhlemeier C.

Nat Plants. 2016 May 27;2(6):16074. doi: 10.1038/nplants.2016.74.

35.

Detection of a rare mutation in the ferroportin gene through targeted next generation sequencing.

Ferbo L, Manzini PM, Badar S, Campostrini N, Ferrarini A, Delledonne M, Francisci T, Tassi V, Valfrè A, Dall'omo AM, D'antico S, Girelli D, Roetto A, De Gobbi M.

Blood Transfus. 2016 Nov;14(6):531-534. doi: 10.2450/2016.0286-15. Epub 2016 Apr 28. No abstract available.

36.

Detection of Peroxynitrite in Plants Exposed to Bacterial Infection.

Bellin D, Delledonne M, Vandelle E.

Methods Mol Biol. 2016;1424:191-200. doi: 10.1007/978-1-4939-3600-7_16.

PMID:
27094421
37.

Deciphering bifidobacterial-mediated metabolic interactions and their impact on gut microbiota by a multi-omics approach.

Turroni F, Milani C, Duranti S, Mancabelli L, Mangifesta M, Viappiani A, Lugli GA, Ferrario C, Gioiosa L, Ferrarini A, Li J, Palanza P, Delledonne M, van Sinderen D, Ventura M.

ISME J. 2016 Jul;10(7):1656-68. doi: 10.1038/ismej.2015.236. Epub 2016 Feb 9.

38.

Toward clinical genomics in everyday medicine: perspectives and recommendations.

Delaney SK, Hultner ML, Jacob HJ, Ledbetter DH, McCarthy JJ, Ball M, Beckman KB, Belmont JW, Bloss CS, Christman MF, Cosgrove A, Damiani SA, Danis T, Delledonne M, Dougherty MJ, Dudley JT, Faucett WA, Friedman JR, Haase DH, Hays TS, Heilsberg S, Huber J, Kaminsky L, Ledbetter N, Lee WH, Levin E, Libiger O, Linderman M, Love RL, Magnus DC, Martland A, McClure SL, Megill SE, Messier H, Nussbaum RL, Palaniappan L, Patay BA, Popovich BW, Quackenbush J, Savant MJ, Su MM, Terry SF, Tucker S, Wong WT, Green RC.

Expert Rev Mol Diagn. 2016;16(5):521-32. doi: 10.1586/14737159.2016.1146593. Epub 2016 Feb 24.

39.

Identification of novel mutations in hemochromatosis genes by targeted next generation sequencing in Italian patients with unexplained iron overload.

Badar S, Busti F, Ferrarini A, Xumerle L, Bozzini P, Capelli P, Pozzi-Mucelli R, Campostrini N, De Matteis G, Marin Vargas S, Giorgetti A, Delledonne M, Olivieri O, Girelli D.

Am J Hematol. 2016 Jun;91(4):420-5. doi: 10.1002/ajh.24304.

40.

Transcriptome analysis of Bacillus thuringiensis spore life, germination and cell outgrowth in a vegetable-based food model.

Bassi D, Colla F, Gazzola S, Puglisi E, Delledonne M, Cocconcelli PS.

Food Microbiol. 2016 May;55:73-85. doi: 10.1016/j.fm.2015.11.006. Epub 2015 Nov 12.

PMID:
26742618
41.

Depletion of tyrosyl-DNA phosphodiesterase 1α (MtTdp1α) affects transposon expression in Medicago truncatula.

Sabatini ME, Donà M, Leonetti P, Minio A, Delledonne M, Carboneral D, Confalonieri M, Giraffa G, Balestrazzi A.

J Integr Plant Biol. 2016 Jul;58(7):618-22. doi: 10.1111/jipb.12457. Epub 2016 Feb 24.

PMID:
26699667
42.

Decreased epigenetic age of PBMCs from Italian semi-supercentenarians and their offspring.

Horvath S, Pirazzini C, Bacalini MG, Gentilini D, Di Blasio AM, Delledonne M, Mari D, Arosio B, Monti D, Passarino G, De Rango F, D'Aquila P, Giuliani C, Marasco E, Collino S, Descombes P, Garagnani P, Franceschi C.

Aging (Albany NY). 2015 Dec;7(12):1159-70.

43.

The Arabidopsis Class III Peroxidase AtPRX71 Negatively Regulates Growth under Physiological Conditions and in Response to Cell Wall Damage.

Raggi S, Ferrarini A, Delledonne M, Dunand C, Ranocha P, De Lorenzo G, Cervone F, Ferrari S.

Plant Physiol. 2015 Dec;169(4):2513-25. doi: 10.1104/pp.15.01464. Epub 2015 Oct 14.

44.

A patient with PMP22-related hereditary neuropathy and DBH-gene-related dysautonomia.

Bartoletti-Stella A, Chiaro G, Calandra-Buonaura G, Contin M, Scaglione C, Barletta G, Cecere A, Garagnani P, Tieri P, Ferrarini A, Piras S, Franceschi C, Delledonne M, Cortelli P, Capellari S.

J Neurol. 2015 Oct;262(10):2373-81. doi: 10.1007/s00415-015-7896-z. Epub 2015 Sep 26.

PMID:
26410747
45.

The Use of Non-Variant Sites to Improve the Clinical Assessment of Whole-Genome Sequence Data.

Ferrarini A, Xumerle L, Griggio F, Garonzi M, Cantaloni C, Centomo C, Vargas SM, Descombes P, Marquis J, Collino S, Franceschi C, Garagnani P, Salisbury BA, Harvey JM, Delledonne M.

PLoS One. 2015 Jul 6;10(7):e0132180. doi: 10.1371/journal.pone.0132180. eCollection 2015.

46.

DNA methylation and gene expression profiles show novel regulatory pathways in hepatocellular carcinoma.

Udali S, Guarini P, Ruzzenente A, Ferrarini A, Guglielmi A, Lotto V, Tononi P, Pattini P, Moruzzi S, Campagnaro T, Conci S, Olivieri O, Corrocher R, Delledonne M, Choi SW, Friso S.

Clin Epigenetics. 2015 Apr 14;7:43. doi: 10.1186/s13148-015-0077-1. eCollection 2015.

47.

Early transcriptional changes in Beta vulgaris in response to low temperature.

Moliterni VM, Paris R, Onofri C, Orrù L, Cattivelli L, Pacifico D, Avanzato C, Ferrarini A, Delledonne M, Mandolino G.

Planta. 2015 Jul;242(1):187-201. doi: 10.1007/s00425-015-2299-z. Epub 2015 Apr 19.

PMID:
25893871
48.

The Solanum commersonii Genome Sequence Provides Insights into Adaptation to Stress Conditions and Genome Evolution of Wild Potato Relatives.

Aversano R, Contaldi F, Ercolano MR, Grosso V, Iorizzo M, Tatino F, Xumerle L, Dal Molin A, Avanzato C, Ferrarini A, Delledonne M, Sanseverino W, Cigliano RA, Capella-Gutierrez S, Gabaldón T, Frusciante L, Bradeen JM, Carputo D.

Plant Cell. 2015 Apr;27(4):954-68. doi: 10.1105/tpc.114.135954. Epub 2015 Apr 14.

49.

Symbiotic plant-fungi interactions stripped down to the root.

Venturini L, Delledonne M.

Nat Genet. 2015 Apr;47(4):309-10. doi: 10.1038/ng.3261.

PMID:
25814307
50.

Transcriptomic analysis of the late stages of grapevine (Vitis vinifera cv. Cabernet Sauvignon) berry ripening reveals significant induction of ethylene signaling and flavor pathways in the skin.

Cramer GR, Ghan R, Schlauch KA, Tillett RL, Heymann H, Ferrarini A, Delledonne M, Zenoni S, Fasoli M, Pezzotti M.

BMC Plant Biol. 2014 Dec 19;14:370. doi: 10.1186/s12870-014-0370-8.

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