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Items: 11

1.

Clinical analysis of germline copy number variation in DMD using a non-conjugate hierarchical Bayesian model.

Kozareva V, Stroff C, Silver M, Freidin JF, Delaney NF.

BMC Med Genomics. 2018 Oct 20;11(1):91. doi: 10.1186/s12920-018-0404-4.

2.

Metabolic profiles of exercise in patients with McArdle disease or mitochondrial myopathy.

Delaney NF, Sharma R, Tadvalkar L, Clish CB, Haller RG, Mootha VK.

Proc Natl Acad Sci U S A. 2017 Aug 1;114(31):8402-8407. doi: 10.1073/pnas.1703338114. Epub 2017 Jul 17.

3.

Effects of sodium benzoate, a widely used food preservative, on glucose homeostasis and metabolic profiles in humans.

Lennerz BS, Vafai SB, Delaney NF, Clish CB, Deik AA, Pierce KA, Ludwig DS, Mootha VK.

Mol Genet Metab. 2015 Jan;114(1):73-9. doi: 10.1016/j.ymgme.2014.11.010. Epub 2014 Nov 15.

4.

Mapping the fitness landscape of gene expression uncovers the cause of antagonism and sign epistasis between adaptive mutations.

Chou HH, Delaney NF, Draghi JA, Marx CJ.

PLoS Genet. 2014 Feb 27;10(2):e1004149. doi: 10.1371/journal.pgen.1004149. eCollection 2014 Feb.

5.

The ability of flux balance analysis to predict evolution of central metabolism scales with the initial distance to the optimum.

Harcombe WR, Delaney NF, Leiby N, Klitgord N, Marx CJ.

PLoS Comput Biol. 2013;9(6):e1003091. doi: 10.1371/journal.pcbi.1003091. Epub 2013 Jun 20.

6.

Development of an optimized medium, strain and high-throughput culturing methods for Methylobacterium extorquens.

Delaney NF, Kaczmarek ME, Ward LM, Swanson PK, Lee MC, Marx CJ.

PLoS One. 2013 Apr 30;8(4):e62957. doi: 10.1371/journal.pone.0062957. Print 2013.

7.

FREQ-Seq: a rapid, cost-effective, sequencing-based method to determine allele frequencies directly from mixed populations.

Chubiz LM, Lee MC, Delaney NF, Marx CJ.

PLoS One. 2012;7(10):e47959. doi: 10.1371/journal.pone.0047959. Epub 2012 Oct 31.

8.

Clarity: an open-source manager for laboratory automation.

Delaney NF, Rojas Echenique JI, Marx CJ.

J Lab Autom. 2013 Apr;18(2):171-7. doi: 10.1177/2211068212460237. Epub 2012 Oct 2.

9.

Ultrafast evolution and loss of CRISPRs following a host shift in a novel wildlife pathogen, Mycoplasma gallisepticum.

Delaney NF, Balenger S, Bonneaud C, Marx CJ, Hill GE, Ferguson-Noel N, Tsai P, Rodrigo A, Edwards SV.

PLoS Genet. 2012 Feb;8(2):e1002511. doi: 10.1371/journal.pgen.1002511. Epub 2012 Feb 9. Erratum in: PLoS Genet. 2012 Mar;8(3). doi: 10.1371/annotation/b5608bc6-aa54-40a7-b246-51fa7bc4a9db.

10.

Diminishing returns epistasis among beneficial mutations decelerates adaptation.

Chou HH, Chiu HC, Delaney NF, Segrè D, Marx CJ.

Science. 2011 Jun 3;332(6034):1190-2. doi: 10.1126/science.1203799.

11.

Darwinian evolution can follow only very few mutational paths to fitter proteins.

Weinreich DM, Delaney NF, Depristo MA, Hartl DL.

Science. 2006 Apr 7;312(5770):111-4.

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