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Items: 22

1.

The ribosomal protein S1-dependent standby site in tisB mRNA consists of a single-stranded region and a 5' structure element.

Romilly C, Deindl S, Wagner EGH.

Proc Natl Acad Sci U S A. 2019 Aug 6;116(32):15901-15906. doi: 10.1073/pnas.1904309116. Epub 2019 Jul 18.

2.

Direct observation of coordinated DNA movements on the nucleosome during chromatin remodelling.

Sabantsev A, Levendosky RF, Zhuang X, Bowman GD, Deindl S.

Nat Commun. 2019 Apr 12;10(1):1720. doi: 10.1038/s41467-019-09657-1.

3.

Long Time-Scale Atomistic Simulations of the Structure and Dynamics of Transcription Factor-DNA Recognition.

Liao Q, Lüking M, Krüger DM, Deindl S, Elf J, Kasson PM, Lynn Kamerlin SC.

J Phys Chem B. 2019 May 2;123(17):3576-3590. doi: 10.1021/acs.jpcb.8b12363. Epub 2019 Apr 18.

PMID:
30952192
4.

New enzymatic and mass spectrometric methodology for the selective investigation of gut microbiota-derived metabolites.

Ballet C, Correia MSP, Conway LP, Locher TL, Lehmann LC, Garg N, Vujasinovic M, Deindl S, Löhr JM, Globisch D.

Chem Sci. 2018 Jun 28;9(29):6233-6239. doi: 10.1039/c8sc01502c. eCollection 2018 Aug 7.

5.

Structure-guided approach to site-specific fluorophore labeling of the lac repressor LacI.

Kipper K, Eremina N, Marklund E, Tubasum S, Mao G, Lehmann LC, Elf J, Deindl S.

PLoS One. 2018 Jun 1;13(6):e0198416. doi: 10.1371/journal.pone.0198416. eCollection 2018.

6.

Mechanistic Insights into Autoinhibition of the Oncogenic Chromatin Remodeler ALC1.

Lehmann LC, Hewitt G, Aibara S, Leitner A, Marklund E, Maslen SL, Maturi V, Chen Y, van der Spoel D, Skehel JM, Moustakas A, Boulton SJ, Deindl S.

Mol Cell. 2017 Dec 7;68(5):847-859.e7. doi: 10.1016/j.molcel.2017.10.017.

7.

The Chd1 chromatin remodeler shifts hexasomes unidirectionally.

Levendosky RF, Sabantsev A, Deindl S, Bowman GD.

Elife. 2016 Dec 29;5. pii: e21356. doi: 10.7554/eLife.21356.

8.

Development of a novel therapeutic vaccine carrier that sustains high antibody titers against several targets simultaneously.

Saupe F, Reichel M, Huijbers EJ, Femel J, Markgren PO, Andersson CE, Deindl S, Danielson UH, Hellman LT, Olsson AK.

FASEB J. 2017 Mar;31(3):1204-1214. doi: 10.1096/fj.201600820R. Epub 2016 Dec 19.

PMID:
27993994
9.

Stepwise nucleosome translocation by RSC remodeling complexes.

Harada BT, Hwang WL, Deindl S, Chatterjee N, Bartholomew B, Zhuang X.

Elife. 2016 Feb 19;5. pii: e10051. doi: 10.7554/eLife.10051.

10.

Histone H4 tail mediates allosteric regulation of nucleosome remodelling by linker DNA.

Hwang WL, Deindl S, Harada BT, Zhuang X.

Nature. 2014 Aug 14;512(7513):213-7. doi: 10.1038/nature13380. Epub 2014 Jun 29.

11.

Structural basis for activation of ZAP-70 by phosphorylation of the SH2-kinase linker.

Yan Q, Barros T, Visperas PR, Deindl S, Kadlecek TA, Weiss A, Kuriyan J.

Mol Cell Biol. 2013 Jun;33(11):2188-201. doi: 10.1128/MCB.01637-12. Epub 2013 Mar 25.

12.

ISWI remodelers slide nucleosomes with coordinated multi-base-pair entry steps and single-base-pair exit steps.

Deindl S, Hwang WL, Hota SK, Blosser TR, Prasad P, Bartholomew B, Zhuang X.

Cell. 2013 Jan 31;152(3):442-52. doi: 10.1016/j.cell.2012.12.040.

13.

Nucleosome mobilization by ISW2 requires the concerted action of the ATPase and SLIDE domains.

Hota SK, Bhardwaj SK, Deindl S, Lin YC, Zhuang X, Bartholomew B.

Nat Struct Mol Biol. 2013 Feb;20(2):222-9. doi: 10.1038/nsmb.2486. Epub 2013 Jan 20.

14.

Monitoring conformational dynamics with single-molecule fluorescence energy transfer: applications in nucleosome remodeling.

Deindl S, Zhuang X.

Methods Enzymol. 2012;513:59-86. doi: 10.1016/B978-0-12-391938-0.00003-3.

15.

Intersubunit capture of regulatory segments is a component of cooperative CaMKII activation.

Chao LH, Pellicena P, Deindl S, Barclay LA, Schulman H, Kuriyan J.

Nat Struct Mol Biol. 2010 Mar;17(3):264-72. doi: 10.1038/nsmb.1751. Epub 2010 Feb 7.

16.

Stability of an autoinhibitory interface in the structure of the tyrosine kinase ZAP-70 impacts T cell receptor response.

Deindl S, Kadlecek TA, Cao X, Kuriyan J, Weiss A.

Proc Natl Acad Sci U S A. 2009 Dec 8;106(49):20699-704. doi: 10.1073/pnas.0911512106. Epub 2009 Nov 17.

17.

Mechanism for activation of the EGF receptor catalytic domain by the juxtamembrane segment.

Jura N, Endres NF, Engel K, Deindl S, Das R, Lamers MH, Wemmer DE, Zhang X, Kuriyan J.

Cell. 2009 Jun 26;137(7):1293-307. doi: 10.1016/j.cell.2009.04.025. Erratum in: Cell. 2009 Aug 7;138(3):604.

18.

The structure, regulation, and function of ZAP-70.

Au-Yeung BB, Deindl S, Hsu LY, Palacios EH, Levin SE, Kuriyan J, Weiss A.

Immunol Rev. 2009 Mar;228(1):41-57. doi: 10.1111/j.1600-065X.2008.00753.x. Review.

PMID:
19290920
19.

Structural basis for the inhibition of tyrosine kinase activity of ZAP-70.

Deindl S, Kadlecek TA, Brdicka T, Cao X, Weiss A, Kuriyan J.

Cell. 2007 May 18;129(4):735-46.

20.

Oligomerization states of the association domain and the holoenyzme of Ca2+/CaM kinase II.

Rosenberg OS, Deindl S, Comolli LR, Hoelz A, Downing KH, Nairn AC, Kuriyan J.

FEBS J. 2006 Feb;273(4):682-94.

21.

Structure of the autoinhibited kinase domain of CaMKII and SAXS analysis of the holoenzyme.

Rosenberg OS, Deindl S, Sung RJ, Nairn AC, Kuriyan J.

Cell. 2005 Dec 2;123(5):849-60.

22.

Photocontrol of cell adhesion processes: model studies with cyclic azobenzene-RGD peptides.

Schütt M, Krupka SS, Milbradt AG, Deindl S, Sinner EK, Oesterhelt D, Renner C, Moroder L.

Chem Biol. 2003 Jun;10(6):487-90.

PMID:
12837381

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