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Expression profile analysis of two antisense lncRNAs to improve prognosis prediction of colorectal adenocarcinoma.

Shademan M, Naseri Salanghuch A, Zare K, Zahedi M, Foroughi MA, Akhavan Rezayat K, Mosannen Mozaffari H, Ghaffarzadegan K, Goshayeshi L, Dehghani H.

Cancer Cell Int. 2019 Nov 6;19:278. doi: 10.1186/s12935-019-1000-1. eCollection 2019.


Meiotic initiation in chicken germ cells is regulated by Cyp26b1 and mesonephros.

Yousefi Taemeh S, Mahdavi Shahri N, Lari R, Bahrami AR, Dehghani H.

J Exp Zool B Mol Dev Evol. 2019 Nov;332(7):269-278. doi: 10.1002/jez.b.22904. Epub 2019 Oct 3.


High-density functional diffuse optical tomography based on frequency-domain measurements improves image quality and spatial resolution.

Doulgerakis M, Eggebrecht AT, Dehghani H.

Neurophotonics. 2019 Jul;6(3):035007. doi: 10.1117/1.NPh.6.3.035007. Epub 2019 Aug 21.


Correction to: Variation in Blood and Colorectal Epithelia's Key Trace Elements along with Expression of Mismatch Repair Proteins from Localized and Metastatic Colorectal Cancer Patients.

Ranjbary AG, Mehrzad J, Dehghani H, Abdollahi A, Hosseinkhani S.

Biol Trace Elem Res. 2019 Jun 22. doi: 10.1007/s12011-019-01787-3. [Epub ahead of print]


The design and application of a bacterial ghost vaccine to evaluate immune response and defense against avian pathogenic Escherichia coli O2:K1 serotype.

Hoseini Shahidi R, Hashemi Tabar G, Bassami MR, Jamshidi A, Dehghani H.

Res Vet Sci. 2019 Aug;125:153-161. doi: 10.1016/j.rvsc.2019.06.001. Epub 2019 Jun 4.


Detecting inflammation in rheumatoid arthritis using Fourier transform analysis of dorsal optical transmission images from a pilot study.

Lighter D, Filer A, Dehghani H.

J Biomed Opt. 2019 Jun;24(6):1-12. doi: 10.1117/1.JBO.24.6.066008.


Variation in Blood and Colorectal Epithelia's Key Trace Elements Along with Expression of Mismatch Repair Proteins from Localized and Metastatic Colorectal Cancer Patients.

Ranjbary AG, Mehrzad J, Dehghani H, Abdollahi A, Hosseinkhani S.

Biol Trace Elem Res. 2019 Jun 6. doi: 10.1007/s12011-019-01749-9. [Epub ahead of print] Erratum in: Biol Trace Elem Res. 2019 Jun 22;:.


Functional near infrared spectroscopy using spatially resolved data to account for tissue scattering: A numerical study and arm-cuff experiment.

Veesa JD, Dehghani H.

J Biophotonics. 2019 Oct;12(10):e201900064. doi: 10.1002/jbio.201900064. Epub 2019 Jun 23.


Self-calibrating time-resolved near infrared spectroscopy.

Wojtkiewicz S, Gerega A, Zanoletti M, Sudakou A, Contini D, Liebert A, Durduran T, Dehghani H.

Biomed Opt Express. 2019 Apr 30;10(5):2657-2669. doi: 10.1364/BOE.10.002657. eCollection 2019 May 1.


Maps of in vivo oxygen pressure with submillimetre resolution and nanomolar sensitivity enabled by Cherenkov-excited luminescence scanned imaging.

Pogue BW, Feng J, LaRochelle EP, Bruža P, Lin H, Zhang R, Shell JR, Dehghani H, Davis SC, Vinogradov SA, Gladstone DJ, Jarvis LA.

Nat Biomed Eng. 2018 Apr;2(4):254-264. doi: 10.1038/s41551-018-0220-3. Epub 2018 Apr 13.


Auto-Regressive Discrete Acquisition Points Transformation for Diffusion Weighted MRI Data.

Metcalfe-Smith E, Meeus EM, Novak J, Dehghani H, Peet AC, Zarinabad N.

IEEE Trans Biomed Eng. 2019 Sep;66(9):2617-2628. doi: 10.1109/TBME.2019.2893523. Epub 2019 Jan 24.


Aegilops tauschii Genome Sequence: A Framework for Meta-analysis of Wheat QTLs.

Xu J, Dai X, Ramasamy RK, Wang L, Zhu T, McGuire PE, Jorgensen CM, Dehghani H, Gulick PJ, Luo MC, Müller HG, Dvorak J.

G3 (Bethesda). 2019 Mar 7;9(3):841-853. doi: 10.1534/g3.118.200921.


Quantitative bioluminescence tomography using spectral derivative data.

Dehghani H, Guggenheim JA, Taylor SL, Xu X, Wang KK.

Biomed Opt Express. 2018 Aug 9;9(9):4163-4174. doi: 10.1364/BOE.9.004163. eCollection 2018 Sep 1.


Equine bone marrow-derived mesenchymal stem cells: optimization of cell density in primary culture.

Zahedi M, Parham A, Dehghani H, Kazemi Mehrjerdi H.

Stem Cell Investig. 2018 Oct 9;5:31. doi: 10.21037/sci.2018.09.01. eCollection 2018.


CRISPR/Cas9 Knockout Strategies to Ablate CCAT1 lncRNA Gene in Cancer Cells.

Zare K, Shademan M, Ghahramani Seno MM, Dehghani H.

Biol Proced Online. 2018 Nov 1;20:21. doi: 10.1186/s12575-018-0086-5. eCollection 2018.


BORIS: a key regulator of cancer stemness.

Soltanian S, Dehghani H.

Cancer Cell Int. 2018 Oct 5;18:154. doi: 10.1186/s12935-018-0650-8. eCollection 2018. Review.


An investigation of the HMGR gene and IPI gene expression in black caraway (Bunium persicum).

Darvishi Zeidabadi D, Jalali Javaran M, Dehghani H, Rashidi Monfared S, Baghizadeh A.

3 Biotech. 2018 Sep;8(9):405. doi: 10.1007/s13205-018-1404-y. Epub 2018 Sep 11. Review.


Lightweight sCMOS-based high-density diffuse optical tomography.

Bergonzi KM, Burns-Yocum TM, Bumstead JR, Buckley EM, Mannion PC, Tracy CH, Mennerick E, Ferradal SL, Dehghani H, Eggebrecht AT, Culver JP.

Neurophotonics. 2018 Jul;5(3):035006. doi: 10.1117/1.NPh.5.3.035006. Epub 2018 Aug 17.


Construction and Characterization of a New Recombinant Vector to Remove Sulfate Repression of dsz Promoter Transcription in Biodesulfurization of Dibenzothiophene.

Khosravinia S, Mahdavi MA, Gheshlaghi R, Dehghani H, Rasekh B.

Front Microbiol. 2018 Jul 17;9:1578. doi: 10.3389/fmicb.2018.01578. eCollection 2018.


Expression of endogenous retroviruses in pre-implantation stages of bovine embryo.

Khazaee E, Farzaneh N, Mirshokraei P, Tabatabaeizadeh SE, Dehghani H.

Reprod Domest Anim. 2018 Dec;53(6):1405-1414. doi: 10.1111/rda.13269. Epub 2018 Jul 30.


Iridium Nanoparticles for Multichannel Luminescence Lifetime Imaging, Mapping Localization in Live Cancer Cells.

King SM, Claire S, Teixeira RI, Dosumu AN, Carrod AJ, Dehghani H, Hannon MJ, Ward AD, Bicknell R, Botchway SW, Hodges NJ, Pikramenou Z.

J Am Chem Soc. 2018 Aug 15;140(32):10242-10249. doi: 10.1021/jacs.8b05105. Epub 2018 Aug 2.


Broadband (550-1350 nm) diffuse optical characterization of thyroid chromophores.

Konugolu Venkata Sekar S, Farina A, Dalla Mora A, Lindner C, Pagliazzi M, Mora M, Aranda G, Dehghani H, Durduran T, Taroni P, Pifferi A.

Sci Rep. 2018 Jul 3;8(1):10015. doi: 10.1038/s41598-018-27684-8.


Genetic combining ability of coriander genotypes for agronomic and phytochemical traits in response to contrasting irrigation regimes.

Gholizadeh A, Dehghani H, Khodadadi M, Gulick PJ.

PLoS One. 2018 Jun 28;13(6):e0199630. doi: 10.1371/journal.pone.0199630. eCollection 2018.


Data on environmentally relevant level of aflatoxin B1-induced human dendritic cells' functional alteration.

Mehrzad J, Bahari A, Bassami MR, Mahmoudi M, Dehghani H.

Data Brief. 2018 Apr 30;18:1576-1580. doi: 10.1016/j.dib.2018.04.104. eCollection 2018 Jun.


Cerebral Oxygenation in Traumatic Brain Injury: Can a Non-Invasive Frequency Domain Near-Infrared Spectroscopy Device Detect Changes in Brain Tissue Oxygen Tension as Well as the Established Invasive Monitor?

Davies DJ, Clancy M, Dehghani H, Lucas SJE, Forcione M, Yakoub KM, Belli A.

J Neurotrauma. 2019 Apr 1;36(7):1175-1183. doi: 10.1089/neu.2018.5667. Epub 2018 Oct 19.


Shining a Light on Awareness: A Review of Functional Near-Infrared Spectroscopy for Prolonged Disorders of Consciousness.

Rupawala M, Dehghani H, Lucas SJE, Tino P, Cruse D.

Front Neurol. 2018 May 22;9:350. doi: 10.3389/fneur.2018.00350. eCollection 2018. Review.


Structural variation and rates of genome evolution in the grass family seen through comparison of sequences of genomes greatly differing in size.

Dvorak J, Wang L, Zhu T, Jorgensen CM, Deal KR, Dai X, Dawson MW, Müller HG, Luo MC, Ramasamy RK, Dehghani H, Gu YQ, Gill BS, Distelfeld A, Devos KM, Qi P, You FM, Gulick PJ, McGuire PE.

Plant J. 2018 Aug;95(3):487-503. doi: 10.1111/tpj.13964. Epub 2018 Jun 17.


Ultrasound-mediation of self-illuminating reporters improves imaging resolution in optically scattering media.

Ahmad J, Jayet B, Hill PJ, Mather ML, Dehghani H, Morgan SP.

Biomed Opt Express. 2018 Mar 13;9(4):1664-1679. doi: 10.1364/BOE.9.001664. eCollection 2018 Apr 1.


Multispectral, non-contact diffuse optical tomography of healthy human finger joints.

Lighter D, Hughes J, Styles I, Filer A, Dehghani H.

Biomed Opt Express. 2018 Mar 2;9(4):1445-1460. doi: 10.1364/BOE.9.001445. eCollection 2018 Apr 1.


Immunobiologically relevant level of aflatoxin B1 alters transcription of key functional immune genes, phagocytosis and survival of human dendritic cells.

Mehrzad J, Bahari A, Bassami MR, Mahmoudi M, Dehghani H.

Immunol Lett. 2018 May;197:44-52. doi: 10.1016/j.imlet.2018.03.008. Epub 2018 Mar 20.


Incorporation of an ultrasound and model guided permissible region improves quantitative source recovery in bioluminescence tomography.

Jayet B, Morgan SP, Dehghani H.

Biomed Opt Express. 2018 Feb 27;9(3):1360-1374. doi: 10.1364/BOE.9.001360. eCollection 2018 Mar 1.


Author Correction: Characterization of Truncated dsz Operon Responsible for Dibenzothiophene Biodesulfurization in Rhodococcus sp. FUM94.

Khosravinia S, Mahdavi MA, Gheshlaghi R, Dehghani H.

Appl Biochem Biotechnol. 2018 Mar;184(3):897. doi: 10.1007/s12010-018-2703-9.


Time-resolved near infrared light propagation using frequency domain superposition.

Wojtkiewicz S, Durduran T, Dehghani H.

Biomed Opt Express. 2017 Dec 4;9(1):41-54. doi: 10.1364/BOE.9.000041. eCollection 2018 Jan 1.


Genetics of intellectual disability in consanguineous families.

Hu H, Kahrizi K, Musante L, Fattahi Z, Herwig R, Hosseini M, Oppitz C, Abedini SS, Suckow V, Larti F, Beheshtian M, Lipkowitz B, Akhtarkhavari T, Mehvari S, Otto S, Mohseni M, Arzhangi S, Jamali P, Mojahedi F, Taghdiri M, Papari E, Soltani Banavandi MJ, Akbari S, Tonekaboni SH, Dehghani H, Ebrahimpour MR, Bader I, Davarnia B, Cohen M, Khodaei H, Albrecht B, Azimi S, Zirn B, Bastami M, Wieczorek D, Bahrami G, Keleman K, Vahid LN, Tzschach A, Gärtner J, Gillessen-Kaesbach G, Varaghchi JR, Timmermann B, Pourfatemi F, Jankhah A, Chen W, Nikuei P, Kalscheuer VM, Oladnabi M, Wienker TF, Ropers HH, Najmabadi H.

Mol Psychiatry. 2019 Jul;24(7):1027-1039. doi: 10.1038/s41380-017-0012-2. Epub 2018 Jan 4.


Faunal data and envenomation emergency first aid of cone snails (Conus spp.) in Qeshm Island, the Persian Gulf.

Khoobdel M, Dehghani H, Tavana AM, Ghasemi M, Dakhteh SM, Hesni MA, Rezaie-Atagholipour M.

Asian Pac J Trop Med. 2017 Dec;10(12):1167-1171. doi: 10.1016/j.apjtm.2017.10.024. Epub 2017 Oct 31.


Toward real-time diffuse optical tomography: accelerating light propagation modeling employing parallel computing on GPU and CPU.

Doulgerakis M, Eggebrecht A, Wojtkiewicz S, Culver J, Dehghani H.

J Biomed Opt. 2017 Dec;22(12):1-11. doi: 10.1117/1.JBO.22.12.125001.


Diffusion-weighted MRI and intravoxel incoherent motion model for diagnosis of pediatric solid abdominal tumors.

Meeus EM, Zarinabad N, Manias KA, Novak J, Rose HEL, Dehghani H, Foster K, Morland B, Peet AC.

J Magn Reson Imaging. 2018 Jun;47(6):1475-1486. doi: 10.1002/jmri.25901. Epub 2017 Nov 21.


Rapid measurement of intravoxel incoherent motion (IVIM) derived perfusion fraction for clinical magnetic resonance imaging.

Meeus EM, Novak J, Dehghani H, Peet AC.

MAGMA. 2018 Apr;31(2):269-283. doi: 10.1007/s10334-017-0656-6. Epub 2017 Oct 26.


Characterization of Truncated dsz Operon Responsible for Dibenzothiophene Biodesulfurization in Rhodococcus sp. FUM94.

Khosravinia S, Mahdavi MA, Gheshlaghi R, Dehghani H.

Appl Biochem Biotechnol. 2018 Mar;184(3):885-896. doi: 10.1007/s12010-017-2596-z. Epub 2017 Sep 16. Erratum in: Appl Biochem Biotechnol. 2018 Jan 25;:.


Imaging and analysis of individual cavitation microbubbles around dental ultrasonic scalers.

Vyas N, Dehghani H, Sammons RL, Wang QX, Leppinen DM, Walmsley AD.

Ultrasonics. 2017 Nov;81:66-72. doi: 10.1016/j.ultras.2017.05.015. Epub 2017 May 24.


Quantitative Genetic Analysis Reveals Potential to Genetically Improve Fruit Yield and Drought Resistance Simultaneously in Coriander.

Khodadadi M, Dehghani H, Jalali Javaran M.

Front Plant Sci. 2017 Apr 20;8:568. doi: 10.3389/fpls.2017.00568. eCollection 2017.


Analysis of Copy Number Variations in Patients with Autism Using Cytogenetic and MLPA Techniques: Report of 16p13.1p13.3 and 10q26.3 Duplications.

Ghasemi Firouzabadi S, Vameghi R, Kariminejad R, Darvish H, Banihashemi S, Firouzkouhi Moghaddam M, Jamali P, Farbod Mofidi Tehrani H, Dehghani H, Raeisoon MR, Narooie-Nejad M, Jamshidi J, Tafakhori A, Sadabadi S, Behjati F.

Int J Mol Cell Med. 2016 Fall;5(4):236-245. Epub 2016 Dec 5.


Stemness Signature of Equine Marrow-derived Mesenchymal Stem Cells.

Zahedi M, Parham A, Dehghani H, Mehrjerdi HK.

Int J Stem Cells. 2017 May 30;10(1):93-102. doi: 10.15283/ijsc16036.


Design and preliminary evaluation of a self-steering, pneumatically driven colonoscopy robot.

Dehghani H, Welch CR, Pourghodrat A, Nelson CA, Oleynikov D, Dasgupta P, Terry BS.

J Med Eng Technol. 2017 Apr;41(3):223-236. doi: 10.1080/03091902.2016.1275853. Epub 2017 Jan 26.


Cardiac Hydatid Cyst without Liver Involvement: A Case Report.

Shojaeifard M, Hosseini S, Hosseini S, Pouraliakbar H, Dehghani H, Noohi F.

Iran J Parasitol. 2016 Apr-Jun;11(2):274-278.


Composite films of metal doped CoS/carbon allotropes; efficient electrocatalyst counter electrodes for high performance quantum dot-sensitized solar cells.

Khalili SS, Dehghani H, Afrooz M.

J Colloid Interface Sci. 2017 May 1;493:32-41. doi: 10.1016/j.jcis.2017.01.005. Epub 2017 Jan 5.


Synbiotic Supplementations for Azotemia in Patients With Chronic Kidney Disease: a Randomized Controlled Trial.

Dehghani H, Heidari F, Mozaffari-Khosravi H, Nouri-Majelan N, Dehghani A.

Iran J Kidney Dis. 2016 Nov;10(6):351-357. Erratum in: Iran J Kidney Dis. 2017 Oct;11(5):392.


Introduction to the BIOMED 2016 feature issue.

Sampson DD, Dehghani H, Hillman EM, Wang TD.

Biomed Opt Express. 2016 Oct 5;7(11):4415. eCollection 2016 Nov 1.


Penetration of sub-micron particles into dentinal tubules using ultrasonic cavitation.

Vyas N, Sammons RL, Pikramenou Z, Palin WM, Dehghani H, Walmsley AD.

J Dent. 2017 Jan;56:112-120. doi: 10.1016/j.jdent.2016.11.006. Epub 2016 Nov 21.


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