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Reassessment of the evolution of wheat chromosomes 4A, 5A, and 7B.

Dvorak J, Wang L, Zhu T, Jorgensen CM, Luo MC, Deal KR, Gu YQ, Gill BS, Distelfeld A, Devos KM, Qi P, McGuire PE.

Theor Appl Genet. 2018 Nov;131(11):2451-2462. doi: 10.1007/s00122-018-3165-8. Epub 2018 Aug 23.


The effects of dietary levels of genistein on ovarian follicle number and gene expression.

Kundu P, Patel S, Meling DD, Deal K, Gao L, Helferich WG, Flaws JA.

Reprod Toxicol. 2018 Oct;81:132-139. doi: 10.1016/j.reprotox.2018.07.085. Epub 2018 Jul 26.


Optimization of Laser-Capture Microdissection for the Isolation of Enteric Ganglia from Fresh-Frozen Human Tissue.

May-Zhang AA, Deal KK, Southard-Smith EM.

J Vis Exp. 2018 Jun 14;(136). doi: 10.3791/57762.


Analysis of Brachypodium genomes with genome-wide optical maps.

Zhu T, Hu Z, Rodriguez JC, Deal KR, Dvorak J, Vogel JP, Liu Z, Luo MC.

Genome. 2018 Aug;61(8):559-565. doi: 10.1139/gen-2018-0013. Epub 2018 Jun 8.


Structural variation and rates of genome evolution in the grass family seen through comparison of sequences of genomes greatly differing in size.

Dvorak J, Wang L, Zhu T, Jorgensen CM, Deal KR, Dai X, Dawson MW, Müller HG, Luo MC, Ramasamy RK, Dehghani H, Gu YQ, Gill BS, Distelfeld A, Devos KM, Qi P, You FM, Gulick PJ, McGuire PE.

Plant J. 2018 Aug;95(3):487-503. doi: 10.1111/tpj.13964. Epub 2018 Jun 17.


How do patients trade-off surgeon choice and waiting times for total joint replacement: a discrete choice experiment.

Marshall DA, Deal K, Conner-Spady B, Bohm E, Hawker G, Loucks L, MacDonald KV, Noseworthy T.

Osteoarthritis Cartilage. 2018 Apr;26(4):522-530. doi: 10.1016/j.joca.2018.01.008. Epub 2018 Feb 7.


Introgression of the Aegilops speltoides Su1-Ph1 Suppressor into Wheat.

Li H, Deal KR, Luo MC, Ji W, Distelfeld A, Dvorak J.

Front Plant Sci. 2017 Dec 20;8:2163. doi: 10.3389/fpls.2017.02163. eCollection 2017.


Genome sequence of the progenitor of the wheat D genome Aegilops tauschii.

Luo MC, Gu YQ, Puiu D, Wang H, Twardziok SO, Deal KR, Huo N, Zhu T, Wang L, Wang Y, McGuire PE, Liu S, Long H, Ramasamy RK, Rodriguez JC, Van SL, Yuan L, Wang Z, Xia Z, Xiao L, Anderson OD, Ouyang S, Liang Y, Zimin AV, Pertea G, Qi P, Bennetzen JL, Dai X, Dawson MW, Müller HG, Kugler K, Rivarola-Duarte L, Spannagl M, Mayer KFX, Lu FH, Bevan MW, Leroy P, Li P, You FM, Sun Q, Liu Z, Lyons E, Wicker T, Salzberg SL, Devos KM, Dvořák J.

Nature. 2017 Nov 23;551(7681):498-502. doi: 10.1038/nature24486. Epub 2017 Nov 15.


Migration pathways of sacral neural crest during development of lower urogenital tract innervation.

Wiese CB, Deal KK, Ireland SJ, Cantrell VA, Southard-Smith EM.

Dev Biol. 2017 Sep 1;429(1):356-369. doi: 10.1016/j.ydbio.2017.04.011. Epub 2017 Apr 25.


Sequencing and comparative analyses of Aegilops tauschii chromosome arm 3DS reveal rapid evolution of Triticeae genomes.

Xie J, Huo N, Zhou S, Wang Y, Guo G, Deal KR, Ouyang S, Liang Y, Wang Z, Xiao L, Zhu T, Hu T, Tiwari V, Zhang J, Li H, Ni Z, Yao Y, Peng H, Zhang S, Anderson OD, McGuire PE, Dvorak J, Luo MC, Liu Z, Gu YQ, Sun Q.

J Genet Genomics. 2017 Jan 20;44(1):51-61. doi: 10.1016/j.jgg.2016.09.005. Epub 2016 Oct 5.


Optical Nano-mapping and Analysis of Plant Genomes.

Luo MC, Deal KR, Murray A, Zhu T, Hastie AR, Stedman W, Sadowski H, Saghbini M.

Methods Mol Biol. 2016;1429:103-17. doi: 10.1007/978-1-4939-3622-9_9.


How do women trade-off benefits and risks in chemotherapy treatment decisions based on gene expression profiling for early-stage breast cancer? A discrete choice experiment.

Marshall DA, Deal K, Bombard Y, Leighl N, MacDonald KV, Trudeau M.

BMJ Open. 2016 Jun 2;6(6):e010981. doi: 10.1136/bmjopen-2015-010981. Erratum in: BMJ Open. 2016 Jun 23;6(6):e010981corr1.


Rapid evolutionary dynamics in a 2.8-Mb chromosomal region containing multiple prolamin and resistance gene families in Aegilops tauschii.

Dong L, Huo N, Wang Y, Deal K, Wang D, Hu T, Dvorak J, Anderson OD, Luo MC, Gu YQ.

Plant J. 2016 Sep;87(5):495-506. doi: 10.1111/tpj.13214. Epub 2016 Aug 21.


The influence of gene expression profiling on decisional conflict in decision making for early-stage breast cancer chemotherapy.

MacDonald KV, Bombard Y, Deal K, Trudeau M, Leighl N, Marshall DA.

Eur J Cancer. 2016 Jul;61:85-93. doi: 10.1016/j.ejca.2016.03.077. Epub 2016 May 4.


The value of personalizing medicine: medical oncologists' views on gene expression profiling in breast cancer treatment.

Bombard Y, Rozmovits L, Trudeau M, Leighl NB, Deal K, Marshall DA.

Oncologist. 2015 Apr;20(4):351-6. doi: 10.1634/theoncologist.2014-0268. Epub 2015 Mar 6.


Examining Parents' Preferences for Group and Individual Parent Training for Children with ADHD Symptoms.

Wymbs FA, Cunningham CE, Chen Y, Rimas HM, Deal K, Waschbusch DA, Pelham WE Jr.

J Clin Child Adolesc Psychol. 2016 Sep-Oct;45(5):614-631. Epub 2015 Feb 20.


The Influence Of Gene Expression Profiling (GEP) On Decisional Conflict In Chemotherapy Treatment Decision-Making For Early-Stage Breast Cancer (BRCA).

Marshall D, MacDonald K, Deal K, Trudeau M, Leighl N, Bombard Y.

Value Health. 2014 Nov;17(7):A569. doi: 10.1016/j.jval.2014.08.1899. Epub 2014 Oct 26. No abstract available.


Modeling the anti-cyberbullying preferences of university students: Adaptive choice-based conjoint analysis.

Cunningham CE, Chen Y, Vaillancourt T, Rimas H, Deal K, Cunningham LJ, Ratcliffe J.

Aggress Behav. 2015 Jul-Aug;41(4):369-85. doi: 10.1002/ab.21560. Epub 2014 Sep 17.


Access to personalized medicine: factors influencing the use and value of gene expression profiling in breast cancer treatment.

Bombard Y, Rozmovits L, Trudeau M, Leighl NB, Deal K, Marshall DA.

Curr Oncol. 2014 Jun;21(3):e426-33. doi: 10.3747/co.21.1782.


Physician and patient willingness to pay for electronic cardiovascular disease management.

Deal K, Keshavjee K, Troyan S, Kyba R, Holbrook AM.

Int J Med Inform. 2014 Jul;83(7):517-28. doi: 10.1016/j.ijmedinf.2014.04.007. Epub 2014 Apr 29.


Patients' perceptions of gene expression profiling in breast cancer treatment decisions.

Bombard Y, Rozmovits L, Trudeau ME, Leighl NB, Deal K, Marshall DA.

Curr Oncol. 2014 Apr;21(2):e203-11. doi: 10.3747/co.21.1524.


Modeling Parenting Programs as an Interim Service for Families Waiting for Children's Mental Health Treatment.

Cunningham CE, Rimas H, Chen Y, Deal K, McGrath P, Lingley-Pottie P, Reid GJ, Lipman E, Corkum P.

J Clin Child Adolesc Psychol. 2015;44(4):616-29. doi: 10.1080/15374416.2014.888666. Epub 2014 Apr 4.


Identification of a robust molecular marker for the detection of the stem rust resistance gene Sr45 in common wheat.

Periyannan S, Bansal U, Bariana H, Deal K, Luo MC, Dvorak J, Lagudah E.

Theor Appl Genet. 2014 Apr;127(4):947-55. doi: 10.1007/s00122-014-2270-6. Epub 2014 Jan 28.


Segmenting patients and physicians using preferences from discrete choice experiments.

Deal K.

Patient. 2014;7(1):5-21. doi: 10.1007/s40271-013-0037-9.


The gene Sr33, an ortholog of barley Mla genes, encodes resistance to wheat stem rust race Ug99.

Periyannan S, Moore J, Ayliffe M, Bansal U, Wang X, Huang L, Deal K, Luo M, Kong X, Bariana H, Mago R, McIntosh R, Dodds P, Dvorak J, Lagudah E.

Science. 2013 Aug 16;341(6147):786-8. doi: 10.1126/science.1239028. Epub 2013 Jun 27.


Assessing the value of symptom relief for patients with gastroesophageal reflux disease treatment: willingness to pay using a discrete choice experiment.

Deal K, Marshall D, Dabrowski D, Charter A, Bukoski M, Moayyedi P.

Value Health. 2013 Jun;16(4):588-98. doi: 10.1016/j.jval.2013.01.007. Epub 2013 May 3.


A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor.

Luo MC, Gu YQ, You FM, Deal KR, Ma Y, Hu Y, Huo N, Wang Y, Wang J, Chen S, Jorgensen CM, Zhang Y, McGuire PE, Pasternak S, Stein JC, Ware D, Kramer M, McCombie WR, Kianian SF, Martis MM, Mayer KF, Sehgal SK, Li W, Gill BS, Bevan MW, Simková H, Dolezel J, Weining S, Lazo GR, Anderson OD, Dvorak J.

Proc Natl Acad Sci U S A. 2013 May 7;110(19):7940-5. doi: 10.1073/pnas.1219082110. Epub 2013 Apr 22.


The interim service preferences of parents waiting for children's mental health treatment: a discrete choice conjoint experiment.

Cunningham CE, Chen Y, Deal K, Rimas H, McGrath P, Reid G, Lipman E, Corkum P.

J Abnorm Child Psychol. 2013 Aug;41(6):865-77. doi: 10.1007/s10802-013-9728-x.


Rapid genome mapping in nanochannel arrays for highly complete and accurate de novo sequence assembly of the complex Aegilops tauschii genome.

Hastie AR, Dong L, Smith A, Finklestein J, Lam ET, Huo N, Cao H, Kwok PY, Deal KR, Dvorak J, Luo MC, Gu Y, Xiao M.

PLoS One. 2013;8(2):e55864. doi: 10.1371/journal.pone.0055864. Epub 2013 Feb 6.


Modeling organizational justice improvements in a pediatric health service : a discrete-choice conjoint experiment.

Cunningham CE, Kostrzewa L, Rimas H, Chen Y, Deal K, Blatz S, Bowman A, Buchanan DH, Calvert R, Jennings B.

Patient. 2013;6(1):45-59. doi: 10.1007/s40271-013-0002-7.


Insular organization of gene space in grass genomes.

Gottlieb A, Müller HG, Massa AN, Wanjugi H, Deal KR, You FM, Xu X, Gu YQ, Luo MC, Anderson OD, Chan AP, Rabinowicz P, Devos KM, Dvorak J.

PLoS One. 2013;8(1):e54101. doi: 10.1371/journal.pone.0054101. Epub 2013 Jan 11.


Measurement of microchannel fluidic resistance with a standard voltage meter.

Godwin LA, Deal KS, Hoepfner LD, Jackson LA, Easley CJ.

Anal Chim Acta. 2013 Jan 3;758:101-7. doi: 10.1016/j.aca.2012.10.043. Epub 2012 Nov 2.


Exploring the diploid wheat ancestral A genome through sequence comparison at the high-molecular-weight glutenin locus region.

Dong L, Huo N, Wang Y, Deal K, Luo MC, Wang D, Anderson OD, Gu YQ.

Mol Genet Genomics. 2012 Dec;287(11-12):855-66. doi: 10.1007/s00438-012-0721-9. Epub 2012 Sep 28.


Genome-wide SNP discovery in walnut with an AGSNP pipeline updated for SNP discovery in allogamous organisms.

You FM, Deal KR, Wang J, Britton MT, Fass JN, Lin D, Dandekar AM, Leslie CA, Aradhya M, Luo MC, Dvorak J.

BMC Genomics. 2012 Jul 31;13:354. doi: 10.1186/1471-2164-13-354.


Tulsa oklahoma oktoberfest tent collapse report.

Deal KE, Synovitz CK, Goodloe JM, King B, Stewart CE.

Emerg Med Int. 2012;2012:729795. doi: 10.1155/2012/729795. Epub 2012 May 10.


The origin of spelt and free-threshing hexaploid wheat.

Dvorak J, Deal KR, Luo MC, You FM, von Borstel K, Dehghani H.

J Hered. 2012 May-Jun;103(3):426-41. doi: 10.1093/jhered/esr152. Epub 2012 Feb 29.


Adaptive choice-based conjoint analysis: a new patient-centered approach to the assessment of health service preferences.

Cunningham CE, Deal K, Chen Y.

Patient. 2010 Dec 1;3(4):257-73. doi: 10.2165/11537870-000000000-00000.


Self-regulated, droplet-based sample chopper for microfluidic absorbance detection.

Deal KS, Easley CJ.

Anal Chem. 2012 Feb 7;84(3):1510-6. doi: 10.1021/ac202791d. Epub 2012 Jan 19.


Passively operated microfluidic device for stimulation and secretion sampling of single pancreatic islets.

Godwin LA, Pilkerton ME, Deal KS, Wanders D, Judd RL, Easley CJ.

Anal Chem. 2011 Sep 15;83(18):7166-72. doi: 10.1021/ac201598b. Epub 2011 Aug 16.


Isolation and live imaging of enteric progenitors based on Sox10-Histone2BVenus transgene expression.

Corpening JC, Deal KK, Cantrell VA, Skelton SB, Buehler DP, Southard-Smith EM.

Genesis. 2011 Jul;49(7):599-618. doi: 10.1002/dvg.20748. Epub 2011 Jun 21.


Gene space dynamics during the evolution of Aegilops tauschii, Brachypodium distachyon, Oryza sativa, and Sorghum bicolor genomes.

Massa AN, Wanjugi H, Deal KR, O'Brien K, You FM, Maiti R, Chan AP, Gu YQ, Luo MC, Anderson OD, Rabinowicz PD, Dvorak J, Devos KM.

Mol Biol Evol. 2011 Sep;28(9):2537-47. doi: 10.1093/molbev/msr080. Epub 2011 Apr 6.


Annotation-based genome-wide SNP discovery in the large and complex Aegilops tauschii genome using next-generation sequencing without a reference genome sequence.

You FM, Huo N, Deal KR, Gu YQ, Luo MC, McGuire PE, Dvorak J, Anderson OD.

BMC Genomics. 2011 Jan 25;12:59. doi: 10.1186/1471-2164-12-59.


Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes.

Akhunov ED, Akhunova AR, Anderson OD, Anderson JA, Blake N, Clegg MT, Coleman-Derr D, Conley EJ, Crossman CC, Deal KR, Dubcovsky J, Gill BS, Gu YQ, Hadam J, Heo H, Huo N, Lazo GR, Luo MC, Ma YQ, Matthews DE, McGuire PE, Morrell PL, Qualset CO, Renfro J, Tabanao D, Talbert LE, Tian C, Toleno DM, Warburton ML, You FM, Zhang W, Dvorak J.

BMC Genomics. 2010 Dec 14;11:702. doi: 10.1186/1471-2164-11-702.


A new implementation of high-throughput five-dimensional clone pooling strategy for BAC library screening.

You FM, Luo MC, Xu K, Deal KR, Anderson OD, Dvorak J.

BMC Genomics. 2010 Dec 6;11:692. doi: 10.1186/1471-2164-11-692.


Physical mapping of a large plant genome using global high-information-content-fingerprinting: the distal region of the wheat ancestor Aegilops tauschii chromosome 3DS.

Fleury D, Luo MC, Dvorak J, Ramsay L, Gill BS, Anderson OD, You FM, Shoaei Z, Deal KR, Langridge P.

BMC Genomics. 2010 Jun 17;11:382. doi: 10.1186/1471-2164-11-382.


Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae.

Luo MC, Deal KR, Akhunov ED, Akhunova AR, Anderson OD, Anderson JA, Blake N, Clegg MT, Coleman-Derr D, Conley EJ, Crossman CC, Dubcovsky J, Gill BS, Gu YQ, Hadam J, Heo HY, Huo N, Lazo G, Ma Y, Matthews DE, McGuire PE, Morrell PL, Qualset CO, Renfro J, Tabanao D, Talbert LE, Tian C, Toleno DM, Warburton ML, You FM, Zhang W, Dvorak J.

Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15780-5. doi: 10.1073/pnas.0908195106. Epub 2009 Aug 26.


Providing information to parents of children with mental health problems: a discrete choice conjoint analysis of professional preferences.

Cunningham CE, Deal K, Rimas H, Chen Y, Buchanan DH, Sdao-Jarvie K.

J Abnorm Child Psychol. 2009 Nov;37(8):1089-102. doi: 10.1007/s10802-009-9338-9.


Modeling the bullying prevention program preferences of educators: a discrete choice conjoint experiment.

Cunningham CE, Vaillancourt T, Rimas H, Deal K, Cunningham L, Short K, Chen Y.

J Abnorm Child Psychol. 2009 Oct;37(7):929-43. doi: 10.1007/s10802-009-9324-2.


Using conjoint analysis to model the preferences of different patient segments for attributes of patient-centered care.

Cunningham CE, Deal K, Rimas H, Campbell H, Russell A, Henderson J, Matheson A, Melnick B.

Patient. 2008 Dec 1;1(4):317-30. doi: 10.2165/01312067-200801040-00013.


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