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Items: 1 to 50 of 63

1.

Internal migration and transmission dynamics of tuberculosis in Shanghai, China: an epidemiological, spatial, genomic analysis.

Yang C, Lu L, Warren JL, Wu J, Jiang Q, Zuo T, Gan M, Liu M, Liu Q, DeRiemer K, Hong J, Shen X, Colijn C, Guo X, Gao Q, Cohen T.

Lancet Infect Dis. 2018 Jul;18(7):788-795. doi: 10.1016/S1473-3099(18)30218-4. Epub 2018 Apr 23.

2.

Recurrent tuberculosis in an urban area in China: Relapse or exogenous reinfection?

Shen X, Yang C, Wu J, Lin S, Gao X, Wu Z, Tian J, Gan M, Luo T, Wang L, Yu C, Mei J, Pan Q, DeRiemer K, Yuan Z, Gao Q.

Tuberculosis (Edinb). 2017 Mar;103:97-104. doi: 10.1016/j.tube.2017.01.007. Epub 2017 Jan 31.

3.

Transmission of multidrug-resistant Mycobacterium tuberculosis in Shanghai, China: a retrospective observational study using whole-genome sequencing and epidemiological investigation.

Yang C, Luo T, Shen X, Wu J, Gan M, Xu P, Wu Z, Lin S, Tian J, Liu Q, Yuan Z, Mei J, DeRiemer K, Gao Q.

Lancet Infect Dis. 2017 Mar;17(3):275-284. doi: 10.1016/S1473-3099(16)30418-2. Epub 2016 Dec 3.

4.

Surgery as an Adjunctive Treatment for Multidrug-Resistant Tuberculosis: An Individual Patient Data Metaanalysis.

Fox GJ, Mitnick CD, Benedetti A, Chan ED, Becerra M, Chiang CY, Keshavjee S, Koh WJ, Shiraishi Y, Viiklepp P, Yim JJ, Pasvol G, Robert J, Shim TS, Shin SS, Menzies D; Collaborative Group for Meta-Analysis of Individual Patient Data in MDR-TB, Ahuja S, Ashkin D, Avendaño M, Banerjee R, Bauer M, Burgos M, Centis R, Cobelens F, Cox H, D'Ambrosio L, de Lange WCM, DeRiemer K, Enarson D, Falzon D, Flanagan K, Flood J, Gandhi N, Garcia-Garcia L, Granich RM, Hollm-Delgado MG, Holtz TH, Hopewell P, Iseman M, Jarlsberg LG, Kim HR, Lancaster J, Lange C, Leimane V, Leung CC, Li J, Menzies D, Migliori GB, Narita M, Nathanson E, Odendaal R, O'Riordan P, Pai M, Palmero D, Park SK, Pena J, Pérez-Guzmán C, Ponce-de-Leon A, Quelapio MID, Quy HT, Riekstina V, Royce S, Salim M, Schaaf HS, Seung KJ, Shah L, Shean K, Sifuentes-Osornio J, Sotgiu G, Strand MJ, Sung SW, Tabarsi P, Tupasi TE, Vargas MH, van Altena R, van der Walt M, van der Werf TS, Westenhouse J, Yew WW.

Clin Infect Dis. 2016 Apr 1;62(7):887-895. doi: 10.1093/cid/ciw002. Epub 2016 Jan 12.

PMID:
26757804
5.

Lung microbiomes: new frontiers?

DeRiemer K, Thompson G 3rd.

Am J Respir Crit Care Med. 2015 Apr 15;191(8):870-1. doi: 10.1164/rccm.201502-0226ED. No abstract available.

6.

Transmission of Mycobacterium tuberculosis in China: a population-based molecular epidemiologic study.

Yang C, Shen X, Peng Y, Lan R, Zhao Y, Long B, Luo T, Sun G, Li X, Qiao K, Gui X, Wu J, Xu J, Li F, Li D, Liu F, Shen M, Hong J, Mei J, DeRiemer K, Gao Q.

Clin Infect Dis. 2015 Jul 15;61(2):219-27. doi: 10.1093/cid/civ255. Epub 2015 Mar 31.

7.

Death with tuberculosis in california, 1994-2008.

Pascopella L, Barry PM, Flood J, DeRiemer K.

Open Forum Infect Dis. 2014 Oct 1;1(3):ofu090. doi: 10.1093/ofid/ofu090. eCollection 2014 Dec.

8.

Whole-genome sequencing to detect recent transmission of Mycobacterium tuberculosis in settings with a high burden of tuberculosis.

Luo T, Yang C, Peng Y, Lu L, Sun G, Wu J, Jin X, Hong J, Li F, Mei J, DeRiemer K, Gao Q.

Tuberculosis (Edinb). 2014 Jul;94(4):434-40. doi: 10.1016/j.tube.2014.04.005. Epub 2014 May 5.

9.

Is crime associated with over-the-counter pharmacy syringe sales? Findings from Los Angeles, California.

Stopka TJ, Geraghty EM, Azari R, Gold EB, DeRiemer K.

Int J Drug Policy. 2014 Mar;25(2):244-50. doi: 10.1016/j.drugpo.2013.12.015. Epub 2014 Jan 8.

PMID:
24495711
10.

Which urban migrants default from tuberculosis treatment in Shanghai, China?

Chen J, Qi L, Xia Z, Shen M, Shen X, Mei J, DeRiemer K, Zheng'an Yuan.

PLoS One. 2013 Nov 28;8(11):e81351. doi: 10.1371/journal.pone.0081351. eCollection 2013.

11.

Deciphering the growth behaviour of Mycobacterium africanum.

Gehre F, Otu J, DeRiemer K, de Sessions PF, Hibberd ML, Mulders W, Corrah T, de Jong BC, Antonio M.

PLoS Negl Trop Dis. 2013 May 16;7(5):e2220. doi: 10.1371/journal.pntd.0002220. Print 2013. Erratum in: PLoS Negl Trop Dis. 2013 Jun;7(6). doi:10.1371/annotation/fb002e1b-e345-4832-a793-d2f4988de308..

12.

Factors associated with presence of pharmacies and pharmacies that sell syringes over-the-counter in Los Angeles County.

Stopka TJ, Geraghty EM, Azari R, Gold EB, Deriemer K.

J Urban Health. 2013 Dec;90(6):1079-90. doi: 10.1007/s11524-013-9798-7.

13.

Tuberculosis in an urban area in China: differences between urban migrants and local residents.

Shen X, Xia Z, Li X, Wu J, Wang L, Li J, Jiang Y, Guo J, Chen J, Hong J, Yuan Z, Pan Q, DeRiemer K, Sun G, Gao Q, Mei J.

PLoS One. 2012;7(11):e51133. doi: 10.1371/journal.pone.0051133. Epub 2012 Nov 30.

14.

Resistance to fluoroquinolones and second-line injectable drugs: impact on multidrug-resistant TB outcomes.

Falzon D, Gandhi N, Migliori GB, Sotgiu G, Cox HS, Holtz TH, Hollm-Delgado MG, Keshavjee S, DeRiemer K, Centis R, D'Ambrosio L, Lange CG, Bauer M, Menzies D; Collaborative Group for Meta-Analysis of Individual Patient Data in MDR-TB.

Eur Respir J. 2013 Jul;42(1):156-68. doi: 10.1183/09031936.00134712. Epub 2012 Oct 25.

15.

Drug resistance beyond extensively drug-resistant tuberculosis: individual patient data meta-analysis.

Migliori GB, Sotgiu G, Gandhi NR, Falzon D, DeRiemer K, Centis R, Hollm-Delgado MG, Palmero D, Pérez-Guzmán C, Vargas MH, D'Ambrosio L, Spanevello A, Bauer M, Chan ED, Schaaf HS, Keshavjee S, Holtz TH, Menzies D; “The Collaborative Group for Meta-Analysis of Individual Patient Data in MDR-TB”.

Eur Respir J. 2013 Jul;42(1):169-179. doi: 10.1183/09031936.00136312. Epub 2012 Oct 11.

16.

Multidrug resistant pulmonary tuberculosis treatment regimens and patient outcomes: an individual patient data meta-analysis of 9,153 patients.

Ahuja SD, Ashkin D, Avendano M, Banerjee R, Bauer M, Bayona JN, Becerra MC, Benedetti A, Burgos M, Centis R, Chan ED, Chiang CY, Cox H, D'Ambrosio L, DeRiemer K, Dung NH, Enarson D, Falzon D, Flanagan K, Flood J, Garcia-Garcia ML, Gandhi N, Granich RM, Hollm-Delgado MG, Holtz TH, Iseman MD, Jarlsberg LG, Keshavjee S, Kim HR, Koh WJ, Lancaster J, Lange C, de Lange WC, Leimane V, Leung CC, Li J, Menzies D, Migliori GB, Mishustin SP, Mitnick CD, Narita M, O'Riordan P, Pai M, Palmero D, Park SK, Pasvol G, Peña J, Pérez-Guzmán C, Quelapio MI, Ponce-de-Leon A, Riekstina V, Robert J, Royce S, Schaaf HS, Seung KJ, Shah L, Shim TS, Shin SS, Shiraishi Y, Sifuentes-Osornio J, Sotgiu G, Strand MJ, Tabarsi P, Tupasi TE, van Altena R, Van der Walt M, Van der Werf TS, Vargas MH, Viiklepp P, Westenhouse J, Yew WW, Yim JJ; Collaborative Group for Meta-Analysis of Individual Patient Data in MDR-TB.

PLoS Med. 2012;9(8):e1001300. Epub 2012 Aug 28.

17.

Mycobacterium tuberculosis Beijing strains favor transmission but not drug resistance in China.

Yang C, Luo T, Sun G, Qiao K, Sun G, DeRiemer K, Mei J, Gao Q.

Clin Infect Dis. 2012 Nov;55(9):1179-87. doi: 10.1093/cid/cis670. Epub 2012 Aug 3.

18.

Demographic, risk, and spatial factors associated with over-the-counter syringe purchase among injection drug users.

Stopka TJ, Lutnick A, Wenger LD, Deriemer K, Geraghty EM, Kral AH.

Am J Epidemiol. 2012 Jul 1;176(1):14-23. doi: 10.1093/aje/kwr492. Epub 2012 May 4.

19.

When tuberculosis comes back: who develops recurrent tuberculosis in california?

Pascopella L, Deriemer K, Watt JP, Flood JM.

PLoS One. 2011;6(11):e26541. doi: 10.1371/journal.pone.0026541. Epub 2011 Nov 1.

20.

Plasma antibody profiles as diagnostic biomarkers for tuberculosis.

Khan IH, Ravindran R, Krishnan VV, Awan IN, Rizvi SK, Saqib MA, Shahzad MI, Tahseen S, Ireton G, Goulding CW, Felgner P, DeRiemer K, Khanum A, Luciw PA.

Clin Vaccine Immunol. 2011 Dec;18(12):2148-53. doi: 10.1128/CVI.05304-11. Epub 2011 Oct 5.

21.

Non-Beijing strains of Mycobacterium tuberculosis in China.

Li X, Xu P, Shen X, Qi L, DeRiemer K, Mei J, Gao Q.

J Clin Microbiol. 2011 Jan;49(1):392-5. doi: 10.1128/JCM.00754-10. Epub 2010 Nov 10.

22.

Selection of mutations to detect multidrug-resistant Mycobacterium tuberculosis strains in Shanghai, China.

Luo T, Zhao M, Li X, Xu P, Gui X, Pickerill S, DeRiemer K, Mei J, Gao Q.

Antimicrob Agents Chemother. 2010 Mar;54(3):1075-81. doi: 10.1128/AAC.00964-09. Epub 2009 Dec 14.

23.

Deaths among tuberculosis cases in Shanghai, China: who is at risk?

Shen X, Deriemer K, Yuan Z, Shen M, Xia Z, Gui X, Wang L, Mei J.

BMC Infect Dis. 2009 Jun 17;9:95. doi: 10.1186/1471-2334-9-95.

24.

Prevalence of fluoroquinolone resistance among tuberculosis patients in Shanghai, China.

Xu P, Li X, Zhao M, Gui X, DeRiemer K, Gagneux S, Mei J, Gao Q.

Antimicrob Agents Chemother. 2009 Jul;53(7):3170-2. doi: 10.1128/AAC.00177-09. Epub 2009 Apr 13.

25.

Use of spoligotyping and large sequence polymorphisms to study the population structure of the Mycobacterium tuberculosis complex in a cohort study of consecutive smear-positive tuberculosis cases in The Gambia.

de Jong BC, Antonio M, Awine T, Ogungbemi K, de Jong YP, Gagneux S, DeRiemer K, Zozio T, Rastogi N, Borgdorff M, Hill PC, Adegbola RA.

J Clin Microbiol. 2009 Apr;47(4):994-1001. doi: 10.1128/JCM.01216-08. Epub 2009 Feb 4.

26.

Transmission of MDR and XDR tuberculosis in Shanghai, China.

Zhao M, Li X, Xu P, Shen X, Gui X, Wang L, Deriemer K, Mei J, Gao Q.

PLoS One. 2009;4(2):e4370. doi: 10.1371/journal.pone.0004370. Epub 2009 Feb 3.

27.

Drug-resistant tuberculosis in Shanghai, China, 2000-2006: prevalence, trends and risk factors.

Shen X, DeRiemer K, Yuan ZA, Shen M, Xia Z, Gui X, Wang L, Gao Q, Mei J.

Int J Tuberc Lung Dis. 2009 Feb;13(2):253-9.

28.

Progression to active tuberculosis, but not transmission, varies by Mycobacterium tuberculosis lineage in The Gambia.

de Jong BC, Hill PC, Aiken A, Awine T, Antonio M, Adetifa IM, Jackson-Sillah DJ, Fox A, Deriemer K, Gagneux S, Borgdorff MW, McAdam KP, Corrah T, Small PM, Adegbola RA.

J Infect Dis. 2008 Oct 1;198(7):1037-43. doi: 10.1086/591504.

29.

Catch them while you can!

DeRiemer K, de Jong BC.

Am J Respir Crit Care Med. 2008 Jul 1;178(1):5-6. doi: 10.1164/rccm.200804-589ED. No abstract available.

PMID:
18565961
30.

Mixed infections of Mycobacterium tuberculosis in tuberculosis patients in Shanghai, China.

Fang R, Li X, Li J, Wu J, Shen X, Gui X, DeRiemer K, Liu L, Mei J, Gao Q.

Tuberculosis (Edinb). 2008 Sep;88(5):469-73. doi: 10.1016/j.tube.2008.02.002. Epub 2008 Apr 21.

31.

Highly polymorphic variable-number tandem repeats loci for differentiating Beijing genotype strains of Mycobacterium tuberculosis in Shanghai, China.

Zhang L, Chen J, Shen X, Gui X, Mei J, Deriemer K, Gao Q.

FEMS Microbiol Lett. 2008 May;282(1):22-31. doi: 10.1111/j.1574-6968.2008.01081.x. Epub 2008 Mar 10.

32.

Profiling antibodies to Mycobacterium tuberculosis by multiplex microbead suspension arrays for serodiagnosis of tuberculosis.

Khan IH, Ravindran R, Yee J, Ziman M, Lewinsohn DM, Gennaro ML, Flynn JL, Goulding CW, DeRiemer K, Lerche NW, Luciw PA.

Clin Vaccine Immunol. 2008 Mar;15(3):433-8. Epub 2007 Dec 12.

33.

Genomic interrogation of ancestral Mycobacterium tuberculosis from south India.

Narayanan S, Gagneux S, Hari L, Tsolaki AG, Rajasekhar S, Narayanan PR, Small PM, Holmes S, Deriemer K.

Infect Genet Evol. 2008 Jul;8(4):474-83. Epub 2007 Sep 29.

34.

Large sequence polymorphisms classify Mycobacterium tuberculosis strains with ancestral spoligotyping patterns.

Flores L, Van T, Narayanan S, DeRiemer K, Kato-Maeda M, Gagneux S.

J Clin Microbiol. 2007 Oct;45(10):3393-5. Epub 2007 Aug 15.

35.

Quantitative impact of human immunodeficiency virus infection on tuberculosis dynamics.

DeRiemer K, Kawamura LM, Hopewell PC, Daley CL.

Am J Respir Crit Care Med. 2007 Nov 1;176(9):936-44. Epub 2007 Aug 9.

36.

Association between embB codon 306 mutations and drug resistance in Mycobacterium tuberculosis.

Shen X, Shen GM, Wu J, Gui XH, Li X, Mei J, DeRiemer K, Gao Q.

Antimicrob Agents Chemother. 2007 Jul;51(7):2618-20. Epub 2007 Apr 16.

37.

Ancillary-care responsibilities in observational research: two cases, two issues.

Dickert N, DeRiemer K, Duffy PE, Garcia-Garcia L, Mutabingwa TK, Sina BJ, Tindana P, Lie R.

Lancet. 2007 Mar 10;369(9564):874-877. doi: 10.1016/S0140-6736(07)60416-4. No abstract available.

38.

Transmission of drug-resistant tuberculosis among treated patients in Shanghai, China.

Li X, Zhang Y, Shen X, Shen G, Gui X, Sun B, Mei J, Deriemer K, Small PM, Gao Q.

J Infect Dis. 2007 Mar 15;195(6):864-9. Epub 2007 Feb 1.

PMID:
17299717
39.

The W-Beijing lineage of Mycobacterium tuberculosis overproduces triglycerides and has the DosR dormancy regulon constitutively upregulated.

Reed MB, Gagneux S, Deriemer K, Small PM, Barry CE 3rd.

J Bacteriol. 2007 Apr;189(7):2583-9. Epub 2007 Jan 19.

40.

Is tuberculin skin testing useful to diagnose latent tuberculosis in BCG-vaccinated children?

García-Sancho F MC, García-García L, Jiménez-Corona ME, Palacios-Martínez M, Ferreyra-Reyes LD, Canizales-Quintero S, Cano-Arellano B, Ponce-de-León A, Sifuentes-Osornio J, Small P, DeRiemer K.

Int J Epidemiol. 2006 Dec;35(6):1447-54. Epub 2006 Sep 28.

PMID:
17008360
41.

Impact of bacterial genetics on the transmission of isoniazid-resistant Mycobacterium tuberculosis.

Gagneux S, Burgos MV, DeRiemer K, Encisco A, Muñoz S, Hopewell PC, Small PM, Pym AS.

PLoS Pathog. 2006 Jun;2(6):e61. Epub 2006 Jun 16.

42.

Microevolution of the direct repeat locus of Mycobacterium tuberculosis in a strain prevalent in San Francisco.

Aga RS, Fair E, Abernethy NF, Deriemer K, Paz EA, Kawamura LM, Small PM, Kato-Maeda M.

J Clin Microbiol. 2006 Apr;44(4):1558-60.

43.

Variable host-pathogen compatibility in Mycobacterium tuberculosis.

Gagneux S, DeRiemer K, Van T, Kato-Maeda M, de Jong BC, Narayanan S, Nicol M, Niemann S, Kremer K, Gutierrez MC, Hilty M, Hopewell PC, Small PM.

Proc Natl Acad Sci U S A. 2006 Feb 21;103(8):2869-73. Epub 2006 Feb 13.

44.

Gender differentials of pulmonary tuberculosis transmission and reactivation in an endemic area.

Jiménez-Corona ME, García-García L, DeRiemer K, Ferreyra-Reyes L, Bobadilla-del-Valle M, Cano-Arellano B, Canizales-Quintero S, Martínez-Gamboa A, Small PM, Sifuentes-Osornio J, Ponce-de-León A.

Thorax. 2006 Apr;61(4):348-53. Epub 2006 Jan 31.

45.

Tuberculosis transmission based on molecular epidemiologic research.

DeRiemer K, Daley CL.

Semin Respir Crit Care Med. 2004 Jun;25(3):297-306.

PMID:
16088471
46.

Does resistance to pyrazinamide accurately indicate the presence of Mycobacterium bovis?

de Jong BC, Onipede A, Pym AS, Gagneux S, Aga RS, DeRiemer K, Small PM.

J Clin Microbiol. 2005 Jul;43(7):3530-2.

47.

Does DOTS work in populations with drug-resistant tuberculosis?

DeRiemer K, García-García L, Bobadilla-del-Valle M, Palacios-Martínez M, Martínez-Gamboa A, Small PM, Sifuentes-Osornio J, Ponce-de-León A.

Lancet. 2005 Apr 2-8;365(9466):1239-45.

PMID:
15811457
48.

Stable association between strains of Mycobacterium tuberculosis and their human host populations.

Hirsh AE, Tsolaki AG, DeRiemer K, Feldman MW, Small PM.

Proc Natl Acad Sci U S A. 2004 Apr 6;101(14):4871-6. Epub 2004 Mar 23.

49.

Functional and evolutionary genomics of Mycobacterium tuberculosis: insights from genomic deletions in 100 strains.

Tsolaki AG, Hirsh AE, DeRiemer K, Enciso JA, Wong MZ, Hannan M, Goguet de la Salmoniere YO, Aman K, Kato-Maeda M, Small PM.

Proc Natl Acad Sci U S A. 2004 Apr 6;101(14):4865-70. Epub 2004 Mar 15.

50.

Effect of drug resistance on the generation of secondary cases of tuberculosis.

Burgos M, DeRiemer K, Small PM, Hopewell PC, Daley CL.

J Infect Dis. 2003 Dec 15;188(12):1878-84. Epub 2003 Dec 9.

PMID:
14673768

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