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Items: 17

1.

Thorough Performance Evaluation of 213 nm Ultraviolet Photodissociation for Top-down Proteomics.

Fornelli L, Srzentić K, Toby TK, Doubleday PF, Huguet R, Mullen C, Melani RD, Dos Santos Seckler H, DeHart CJ, Weisbrod CR, Durbin KR, Greer JB, Early BP, Fellers RT, Zabrouskov V, Thomas PM, Compton PD, Kelleher NL.

Mol Cell Proteomics. 2020 Feb;19(2):405-420. doi: 10.1074/mcp.TIR119.001638. Epub 2019 Dec 30.

PMID:
31888965
2.

Best practices and benchmarks for intact protein analysis for top-down mass spectrometry.

Donnelly DP, Rawlins CM, DeHart CJ, Fornelli L, Schachner LF, Lin Z, Lippens JL, Aluri KC, Sarin R, Chen B, Lantz C, Jung W, Johnson KR, Koller A, Wolff JJ, Campuzano IDG, Auclair JR, Ivanov AR, Whitelegge JP, Paša-Tolić L, Chamot-Rooke J, Danis PO, Smith LM, Tsybin YO, Loo JA, Ge Y, Kelleher NL, Agar JN.

Nat Methods. 2019 Jul;16(7):587-594. doi: 10.1038/s41592-019-0457-0. Epub 2019 Jun 27. Review.

3.

A comprehensive pipeline for translational top-down proteomics from a single blood draw.

Toby TK, Fornelli L, Srzentić K, DeHart CJ, Levitsky J, Friedewald J, Kelleher NL.

Nat Protoc. 2019 Jan;14(1):119-152. doi: 10.1038/s41596-018-0085-7.

4.

Characterization of a long overlooked copper protein from methane- and ammonia-oxidizing bacteria.

Fisher OS, Kenney GE, Ross MO, Ro SY, Lemma BE, Batelu S, Thomas PM, Sosnowski VC, DeHart CJ, Kelleher NL, Stemmler TL, Hoffman BM, Rosenzweig AC.

Nat Commun. 2018 Oct 15;9(1):4276. doi: 10.1038/s41467-018-06681-5.

5.

The unique biomineralization transcriptome and proteome of Lytechinus variegatus teeth.

Alvares K, DeHart CJ, Thomas PM, Kelleher NL, Veis A.

Connect Tissue Res. 2018 Dec;59(sup1):20-29. doi: 10.1080/03008207.2017.1408605.

6.

Precise characterization of KRAS4b proteoforms in human colorectal cells and tumors reveals mutation/modification cross-talk.

Ntai I, Fornelli L, DeHart CJ, Hutton JE, Doubleday PF, LeDuc RD, van Nispen AJ, Fellers RT, Whiteley G, Boja ES, Rodriguez H, Kelleher NL.

Proc Natl Acad Sci U S A. 2018 Apr 17;115(16):4140-4145. doi: 10.1073/pnas.1716122115. Epub 2018 Apr 2.

7.

The biosynthesis of methanobactin.

Kenney GE, Dassama LMK, Pandelia ME, Gizzi AS, Martinie RJ, Gao P, DeHart CJ, Schachner LF, Skinner OS, Ro SY, Zhu X, Sadek M, Thomas PM, Almo SC, Bollinger JM Jr, Krebs C, Kelleher NL, Rosenzweig AC.

Science. 2018 Mar 23;359(6382):1411-1416. doi: 10.1126/science.aap9437.

8.

High-Throughput Analysis of Intact Human Proteins Using UVPD and HCD on an Orbitrap Mass Spectrometer.

Cleland TP, DeHart CJ, Fellers RT, VanNispen AJ, Greer JB, LeDuc RD, Parker WR, Thomas PM, Kelleher NL, Brodbelt JS.

J Proteome Res. 2017 May 5;16(5):2072-2079. doi: 10.1021/acs.jproteome.7b00043. Epub 2017 Apr 19.

9.

Top-down proteomics: Where we are, where we are going?

Fornelli L, Toby TK, Schachner LF, Doubleday PF, Srzentić K, DeHart CJ, Kelleher NL.

J Proteomics. 2018 Mar 20;175:3-4. doi: 10.1016/j.jprot.2017.02.002. Epub 2017 Feb 7. No abstract available.

10.

Bioinformatics Analysis of Top-Down Mass Spectrometry Data with ProSight Lite.

DeHart CJ, Fellers RT, Fornelli L, Kelleher NL, Thomas PM.

Methods Mol Biol. 2017;1558:381-394. doi: 10.1007/978-1-4939-6783-4_18.

11.

Expansion for the Brachylophosaurus canadensis Collagen I Sequence and Additional Evidence of the Preservation of Cretaceous Protein.

Schroeter ER, DeHart CJ, Cleland TP, Zheng W, Thomas PM, Kelleher NL, Bern M, Schweitzer MH.

J Proteome Res. 2017 Feb 3;16(2):920-932. doi: 10.1021/acs.jproteome.6b00873. Epub 2017 Jan 23.

12.

Identification and Characterization of Human Proteoforms by Top-Down LC-21 Tesla FT-ICR Mass Spectrometry.

Anderson LC, DeHart CJ, Kaiser NK, Fellers RT, Smith DF, Greer JB, LeDuc RD, Blakney GT, Thomas PM, Kelleher NL, Hendrickson CL.

J Proteome Res. 2017 Feb 3;16(2):1087-1096. doi: 10.1021/acs.jproteome.6b00696. Epub 2016 Dec 12.

13.
14.

Characterization of Methanobactin from Methylosinus sp. LW4.

Kenney GE, Goering AW, Ross MO, DeHart CJ, Thomas PM, Hoffman BM, Kelleher NL, Rosenzweig AC.

J Am Chem Soc. 2016 Sep 7;138(35):11124-7. doi: 10.1021/jacs.6b06821. Epub 2016 Aug 26.

15.

Impact of the adenoviral E4 Orf3 protein on the activity and posttranslational modification of p53.

DeHart CJ, Perlman DH, Flint SJ.

J Virol. 2015 Mar;89(6):3209-20. doi: 10.1128/JVI.03072-14. Epub 2015 Jan 7.

16.

Extensive post-translational modification of active and inactivated forms of endogenous p53.

DeHart CJ, Chahal JS, Flint SJ, Perlman DH.

Mol Cell Proteomics. 2014 Jan;13(1):1-17. doi: 10.1074/mcp.M113.030254. Epub 2013 Sep 20.

17.

The repression domain of the E1B 55-kilodalton protein participates in countering interferon-induced inhibition of adenovirus replication.

Chahal JS, Gallagher C, DeHart CJ, Flint SJ.

J Virol. 2013 Apr;87(8):4432-44. doi: 10.1128/JVI.03387-12. Epub 2013 Feb 6.

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