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Items: 1 to 50 of 315

1.

Stick-slip dynamics of migrating cells on viscoelastic substrates.

De PS, De R.

Phys Rev E. 2019 Jul;100(1-1):012409. doi: 10.1103/PhysRevE.100.012409.

PMID:
31499904
2.

Molecular cobalt corrole complex for the heterogeneous electrocatalytic reduction of carbon dioxide.

Gonglach S, Paul S, Haas M, Pillwein F, Sreejith SS, Barman S, De R, Müllegger S, Gerschel P, Apfel UP, Coskun H, Aljabour A, Stadler P, Schöfberger W, Roy S.

Nat Commun. 2019 Aug 27;10(1):3864. doi: 10.1038/s41467-019-11868-5.

3.

Cluster Quality based Non-Reductional (CQNR) oversampling technique and effector protein predictor based on 3D structure (EPP3D) of proteins.

Sen R, Tagore S, De RK.

Comput Biol Med. 2019 Sep;112:103374. doi: 10.1016/j.compbiomed.2019.103374. Epub 2019 Jul 31.

PMID:
31419629
4.

PyPredT6: A python-based prediction tool for identification of Type VI effector proteins.

Sen R, Nayak L, De RK.

J Bioinform Comput Biol. 2019 Jun;17(3):1950019. doi: 10.1142/S0219720019500197.

PMID:
31288641
5.

Laboratory evaluation of rapid antigen detection tests for more-sensitive detection of Respiratory syncytial virus antigen.

Sun Y, Deng J, Qian Y, Zhu R, Wang F, Tian R, De R, Zhao L.

Jpn J Infect Dis. 2019 Jun 28. doi: 10.7883/yoken.JJID.2018.528. [Epub ahead of print]

6.

Aggregation dynamics of active cells on non-adhesive substrate.

Mukhopadhyay D, De R.

Phys Biol. 2019 Jun 4;16(4):046006. doi: 10.1088/1478-3975/ab1e76.

PMID:
31042683
7.

Indomethacin impairs mitochondrial dynamics by activating the PKCζ-p38-DRP1 pathway and inducing apoptosis in gastric cancer and normal mucosal cells.

Mazumder S, De R, Debsharma S, Bindu S, Maity P, Sarkar S, Saha SJ, Siddiqui AA, Banerjee C, Nag S, Saha D, Pramanik S, Mitra K, Bandyopadhyay U.

J Biol Chem. 2019 May 17;294(20):8238-8258. doi: 10.1074/jbc.RA118.004415. Epub 2019 Apr 2.

PMID:
30940726
8.

Sonic hedgehog pathway activation regulates cervical cancer stem cell characteristics during epithelial to mesenchymal transition.

Sharma A, De R, Javed S, Srinivasan R, Pal A, Bhattacharyya S.

J Cell Physiol. 2019 Feb 4. doi: 10.1002/jcp.28231. [Epub ahead of print]

PMID:
30714153
9.

Computational neuroscience and neuroinformatics: Recent progress and resources.

Nayak L, Dasgupta A, Das R, Ghosh K, De RK.

J Biosci. 2018 Dec;43(5):1037-1054. Review.

10.

[Correlation between human bocavirus 2 infection in children and acute diarrhea in Beijing].

De R, Liu LY, Qian Y, Jia LP, Dong HJ, Zhu RN, Liu YH, Lyu YQ, Zhao LQ.

Zhonghua Er Ke Za Zhi. 2018 Dec 2;56(12):945-949. doi: 10.3760/cma.j.issn.0578-1310.2018.12.011. Chinese.

PMID:
30518010
11.

Hydrazonophenol, a Food Vacuole-Targeted and Ferriprotoporphyrin IX-Interacting Chemotype Prevents Drug-Resistant Malaria.

Saha SJ, Siddiqui AA, Pramanik S, Saha D, De R, Mazumder S, Debsharma S, Nag S, Banerjee C, Bandyopadhyay U.

ACS Infect Dis. 2019 Jan 11;5(1):63-73. doi: 10.1021/acsinfecdis.8b00178. Epub 2018 Dec 7.

PMID:
30472841
12.

Macrophage migration inhibitory factor regulates mitochondrial dynamics and cell growth of human cancer cell lines through CD74-NF-κB signaling.

De R, Sarkar S, Mazumder S, Debsharma S, Siddiqui AA, Saha SJ, Banerjee C, Nag S, Saha D, Pramanik S, Bandyopadhyay U.

J Biol Chem. 2018 Dec 21;293(51):19740-19760. doi: 10.1074/jbc.RA118.003935. Epub 2018 Oct 26.

PMID:
30366984
13.

ASAPP: Architectural Similarity-based Automated Pathway Prediction System and its Application in Host-Pathogen Interactions.

Sen R, Tagore S, De RK.

IEEE/ACM Trans Comput Biol Bioinform. 2018 Sep 28. doi: 10.1109/TCBB.2018.2872527. [Epub ahead of print]

PMID:
30281472
14.

A general model of focal adhesion orientation dynamics in response to static and cyclic stretch.

De R.

Commun Biol. 2018 Jun 28;1:81. doi: 10.1038/s42003-018-0084-9. eCollection 2018.

15.

Outbreak of Burkholderia Cepacia Infection: a Systematic Study in a Hematolooncology Unit of a Tertiary Care Hospital from Eastern India.

Baul SN, De R, Mandal PK, Roy S, Dolai TK, Chakrabarti P.

Mediterr J Hematol Infect Dis. 2018 Sep 1;10(1):e2018051. doi: 10.4084/MJHID.2018.051. eCollection 2018.

16.

Comparative study of bone marrow and blood plasma levels of IL-2 in aplastic anaemia and their relationship with disease severity.

De R, Dutta A, Dolai TK, Ghosh K, Halder A.

Hematology. 2019 Dec;24(1):84-88. doi: 10.1080/10245332.2018.1512391. Epub 2018 Aug 23.

PMID:
30139310
17.

Recent progress on biocompatible nanocarrier-based genistein delivery systems in cancer therapy.

Tyagi N, Song YH, De R.

J Drug Target. 2019 Apr;27(4):394-407. doi: 10.1080/1061186X.2018.1514040. Epub 2018 Sep 5.

PMID:
30124078
18.

A MODEL for DISTRIBUTED PROCESSING and ANALYSES of NGS DATA under MAP-REDUCE PARADIGM.

Samaddar S, Sinha R, De RK.

IEEE/ACM Trans Comput Biol Bioinform. 2018 Mar 19. doi: 10.1109/TCBB.2018.2816022. [Epub ahead of print]

PMID:
29993814
19.

Succinate aggravates NAFLD progression to liver cancer on the onset of obesity: An in silico model.

Ray I, Dasgupta A, De RK.

J Bioinform Comput Biol. 2018 Aug;16(4):1850008. doi: 10.1142/S0219720018500087. Epub 2018 Apr 26.

PMID:
29954288
20.

Detection of retromer assembly in Plasmodium falciparum by immunosensing coupled to Surface Plasmon Resonance.

Iqbal MS, Siddiqui AA, Banerjee C, Nag S, Mazumder S, De R, Saha SJ, Karri SK, Bandyopadhyay U.

Biochim Biophys Acta Proteins Proteom. 2018 May - Jun;1866(5-6):722-730. doi: 10.1016/j.bbapap.2018.04.005. Epub 2018 Apr 11.

PMID:
29654975
21.

SWI/SNF subunit expression heterogeneity in human aplastic anemia stem/progenitors.

Sinha S, Chatterjee SS, Biswas M, Nag A, Banerjee D, De R, Sengupta A.

Exp Hematol. 2018 Jun;62:39-44.e2. doi: 10.1016/j.exphem.2018.03.005. Epub 2018 Mar 27.

PMID:
29596882
22.

Antimicrobial activity of ellagic acid against Helicobacter pylori isolates from India and during infections in mice.

De R, Sarkar A, Ghosh P, Ganguly M, Karmakar BC, Saha DR, Halder A, Chowdhury A, Mukhopadhyay AK.

J Antimicrob Chemother. 2018 Jun 1;73(6):1595-1603. doi: 10.1093/jac/dky079.

PMID:
29566160
23.

Incidence of Fanconi anaemia in phenotypically normal aplastic anaemia patients in West Bengal.

Dutta A, De R, Dolai TK, Pal P, Ghosh S, Mitra PK, Halder A.

Hematology. 2018 Aug;23(7):405-412. doi: 10.1080/10245332.2017.1422322. Epub 2018 Jan 7.

PMID:
29307285
24.

OCDD: an obesity and co-morbid disease database.

Ray I, Bhattacharya A, De RK.

BioData Min. 2017 Nov 21;10:33. doi: 10.1186/s13040-017-0153-5. eCollection 2017.

25.

Cytogenetic study is not essential in patients with aplastic anemia.

Dutta A, De R, Dolai TK, Mitra PK, Halder A.

Am J Blood Res. 2017 Nov 1;7(5):49-58. eCollection 2017.

26.

Slow update stochastic simulation algorithms for modeling complex biochemical networks.

Ghosh D, De RK.

Biosystems. 2017 Dec;162:135-146. doi: 10.1016/j.biosystems.2017.10.011. Epub 2017 Nov 1.

PMID:
29080799
27.

Effect of oxygen partial pressure in deposition ambient on the properties of RF magnetron sputter deposited Gd2O3 thin films.

Maidul Haque S, De R, Tripathi S, Mukherjee C, Yadav AK, Bhattacharyya D, Jha SN, Sahoo NK.

Appl Opt. 2017 Aug 1;56(22):6114-6125. doi: 10.1364/AO.56.006114.

PMID:
29047804
28.

Performance of Co/Ti multilayers in a water window soft x-ray regime.

Sarkar P, Biswas A, De R, Divakar Rao K, Ghosh S, Modi MH, John S, Barshilia HC, Bhattacharyya D, Sahoo NK.

Appl Opt. 2017 Sep 20;56(27):7525-7532. doi: 10.1364/AO.56.007525.

PMID:
29047727
29.

Acute mental stress induces mitochondrial bioenergetic crisis and hyper-fission along with aberrant mitophagy in the gut mucosa in rodent model of stress-related mucosal disease.

De R, Mazumder S, Sarkar S, Debsharma S, Siddiqui AA, Saha SJ, Banerjee C, Nag S, Saha D, Bandyopadhyay U.

Free Radic Biol Med. 2017 Dec;113:424-438. doi: 10.1016/j.freeradbiomed.2017.10.009. Epub 2017 Oct 7.

PMID:
28993273
30.

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Pietz G, De R, Hedberg M, Sjöberg V, Sandström O, Hernell O, Hammarström S, Hammarström ML.

PLoS One. 2017 Sep 21;12(9):e0185025. doi: 10.1371/journal.pone.0185025. eCollection 2017.

31.

Risk of acute gastroenteritis associated with human bocavirus infection in children: A systematic review and meta-analysis.

De R, Liu L, Qian Y, Zhu R, Deng J, Wang F, Sun Y, Dong H, Jia L, Zhao L.

PLoS One. 2017 Sep 14;12(9):e0184833. doi: 10.1371/journal.pone.0184833. eCollection 2017. Review.

32.

In Silico Modeling of Crabtree Effect.

Ghosh D, De RK.

Endocr Metab Immune Disord Drug Targets. 2017;17(3):182-188. doi: 10.2174/1871530317666170828111113. Review.

PMID:
28847265
33.

Discovery and replication of SNP-SNP interactions for quantitative lipid traits in over 60,000 individuals.

Holzinger ER, Verma SS, Moore CB, Hall M, De R, Gilbert-Diamond D, Lanktree MB, Pankratz N, Amuzu A, Burt A, Dale C, Dudek S, Furlong CE, Gaunt TR, Kim DS, Riess H, Sivapalaratnam S, Tragante V, van Iperen EPA, Brautbar A, Carrell DS, Crosslin DR, Jarvik GP, Kuivaniemi H, Kullo IJ, Larson EB, Rasmussen-Torvik LJ, Tromp G, Baumert J, Cruickshanks KJ, Farrall M, Hingorani AD, Hovingh GK, Kleber ME, Klein BE, Klein R, Koenig W, Lange LA, Mӓrz W, North KE, Charlotte Onland-Moret N, Reiner AP, Talmud PJ, van der Schouw YT, Wilson JG, Kivimaki M, Kumari M, Moore JH, Drenos F, Asselbergs FW, Keating BJ, Ritchie MD.

BioData Min. 2017 Jul 24;10:25. doi: 10.1186/s13040-017-0145-5. eCollection 2017.

34.

Retrospective genomic analysis of Vibrio cholerae O1 El Tor strains from different places in India reveals the presence of ctxB-7 allele found in Haitian isolates.

De R, Ramamurthy T, Sarkar BL, Mukhopadhyay AK, Pazhani GP, Sarkar S, Dutta S, Nair GB.

Epidemiol Infect. 2017 Aug;145(11):2212-2220. doi: 10.1017/S0950268817001182.

PMID:
28712383
35.

Induction of immunomodulatory miR-146a and miR-155 in small intestinal epithelium of Vibrio cholerae infected patients at acute stage of cholera.

Bitar A, De R, Melgar S, Aung KM, Rahman A, Qadri F, Wai SN, Shirin T, Hammarström ML.

PLoS One. 2017 Mar 20;12(3):e0173817. doi: 10.1371/journal.pone.0173817. eCollection 2017.

36.

Outcome of Cyclosporine Monotherapy in Patients of Aplastic Anemia: Experience of a Tertiary Care Hospital in Eastern India.

Mandal PK, Baul S, Dolai TK, De R, Chakrabarti P.

Indian J Hematol Blood Transfus. 2017 Mar;33(1):144-147. doi: 10.1007/s12288-016-0706-7. Epub 2016 Jul 19.

37.

Phylogeography of freshwater fish Puntius sophore in India.

Negi RK, Joshi BD, Johnson JA, De R, Goyal SP.

Mitochondrial DNA A DNA Mapp Seq Anal. 2018 Mar;29(2):256-265. doi: 10.1080/24701394.2016.1275598. Epub 2017 Jan 24.

PMID:
28117612
38.

Efficacy and tolerability of topical sertaconazole versus topical terbinafine in localized dermatophytosis: A randomized, observer-blind, parallel group study.

Chatterjee D, Ghosh SK, Sen S, Sarkar S, Hazra A, De R.

Indian J Pharmacol. 2016 Nov-Dec;48(6):659-664. doi: 10.4103/0253-7613.194850.

39.

Spectrum of complex chromosomal aberrations in a myelodysplastic syndrome and a brief review.

Ganguly BB, Dolai TK, De R, Kadam NN.

J Cancer Res Ther. 2016 Jul-Sep;12(3):1203-1206. doi: 10.4103/0973-1482.197563. Review.

40.

Obesity: An Immunometabolic Perspective.

Ray I, Mahata SK, De RK.

Front Endocrinol (Lausanne). 2016 Dec 12;7:157. doi: 10.3389/fendo.2016.00157. eCollection 2016. Review.

41.

Cancer therapeutics with epigallocatechin-3-gallate encapsulated in biopolymeric nanoparticles.

Tyagi N, De R, Begun J, Popat A.

Int J Pharm. 2017 Feb 25;518(1-2):220-227. doi: 10.1016/j.ijpharm.2016.12.030. Epub 2016 Dec 14. Review.

PMID:
27988378
42.

Precision medicine with electronic medical records: from the patients and for the patients.

Nayak L, Ray I, De RK.

Ann Transl Med. 2016 Oct;4(Suppl 1):S61. No abstract available.

43.

Identifying gene-gene interactions that are highly associated with four quantitative lipid traits across multiple cohorts.

De R, Verma SS, Holzinger E, Hall M, Burt A, Carrell DS, Crosslin DR, Jarvik GP, Kuivaniemi H, Kullo IJ, Lange LA, Lanktree MB, Larson EB, North KE, Reiner AP, Tragante V, Tromp G, Wilson JG, Asselbergs FW, Drenos F, Moore JH, Ritchie MD, Keating B, Gilbert-Diamond D.

Hum Genet. 2017 Feb;136(2):165-178. doi: 10.1007/s00439-016-1738-7. Epub 2016 Nov 15.

PMID:
27848076
44.

Prescribing patterns of medicines in chronic kidney disease patients on maintenance hemodialysis.

Chakraborty S, Ghosh S, Banerjea A, De RR, Hazra A, Mandal SK.

Indian J Pharmacol. 2016 Sep-Oct;48(5):586-590.

45.

Selective scavenging of intra-mitochondrial superoxide corrects diclofenac-induced mitochondrial dysfunction and gastric injury: A novel gastroprotective mechanism independent of gastric acid suppression.

Mazumder S, De R, Sarkar S, Siddiqui AA, Saha SJ, Banerjee C, Iqbal MS, Nag S, Debsharma S, Bandyopadhyay U.

Biochem Pharmacol. 2016 Dec 1;121:33-51. doi: 10.1016/j.bcp.2016.09.027. Epub 2016 Sep 28.

PMID:
27693316
46.

Wnt signal transduction pathways: modules, development and evolution.

Nayak L, Bhattacharyya NP, De RK.

BMC Syst Biol. 2016 Aug 1;10 Suppl 2:44. doi: 10.1186/s12918-016-0299-7.

47.

A review on host-pathogen interactions: classification and prediction.

Sen R, Nayak L, De RK.

Eur J Clin Microbiol Infect Dis. 2016 Oct;35(10):1581-99. doi: 10.1007/s10096-016-2716-7. Epub 2016 Jul 29. Review.

PMID:
27470504
48.

Antimicrobial susceptibility profiles of Helicobacter pylori isolated from patients in North India.

Gehlot V, Mahant S, Mukhopadhyay AK, Das K, De R, Kar P, Das R.

J Glob Antimicrob Resist. 2016 Jun;5:51-6. doi: 10.1016/j.jgar.2015.09.009. Epub 2015 Nov 26.

PMID:
27436467
49.

Long-Standing Stability of Silver Nanorod Array Substrates Functionalized Using a Series of Thiols for a SERS-Based Sensing Application.

De R, Shin YS, Lee CL, Oh MK.

Appl Spectrosc. 2016 Jul;70(7):1137-49. doi: 10.1177/0003702816652327. Epub 2016 Jun 7.

PMID:
27273976
50.

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