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A combined metabolomic and bioinformatic approach to investigate the function of transport proteins of the important pathogen Mycoplasma bovis.

Masukagami Y, Nijagal B, Mahdizadeh S, Tseng CW, Dayalan S, Tivendale KA, Markham PF, Browning GF, Sansom FM.

Vet Microbiol. 2019 Jul;234:8-16. doi: 10.1016/j.vetmic.2019.05.008. Epub 2019 May 9.


Review of recent developments in GC-MS approaches to metabolomics-based research.

Beale DJ, Pinu FR, Kouremenos KA, Poojary MM, Narayana VK, Boughton BA, Kanojia K, Dayalan S, Jones OAH, Dias DA.

Metabolomics. 2018 Nov 17;14(11):152. doi: 10.1007/s11306-018-1449-2. Review.


mzTab-M: A Data Standard for Sharing Quantitative Results in Mass Spectrometry Metabolomics.

Hoffmann N, Rein J, Sachsenberg T, Hartler J, Haug K, Mayer G, Alka O, Dayalan S, Pearce JTM, Rocca-Serra P, Qi D, Eisenacher M, Perez-Riverol Y, Vizcaíno JA, Salek RM, Neumann S, Jones AR.

Anal Chem. 2019 Mar 5;91(5):3302-3310. doi: 10.1021/acs.analchem.8b04310. Epub 2019 Feb 13.


Metabolite profiling of Mycoplasma gallisepticum mutants, combined with bioinformatic analysis, can reveal the likely functions of virulence-associated genes.

Masukagami Y, Nijagal B, Tseng CW, Dayalan S, Tivendale KA, Markham PF, Browning GF, Sansom FM.

Vet Microbiol. 2018 Sep;223:160-167. doi: 10.1016/j.vetmic.2018.08.001. Epub 2018 Aug 2.


Best practice data life cycle approaches for the life sciences.

Griffin PC, Khadake J, LeMay KS, Lewis SE, Orchard S, Pask A, Pope B, Roessner U, Russell K, Seemann T, Treloar A, Tyagi S, Christiansen JH, Dayalan S, Gladman S, Hangartner SB, Hayden HL, Ho WWH, Keeble-Gagnère G, Korhonen PK, Neish P, Prestes PR, Richardson MF, Watson-Haigh NS, Wyres KL, Young ND, Schneider MV.

Version 2. F1000Res. 2017 Aug 31 [revised 2018 Jan 1];6:1618. doi: 10.12688/f1000research.12344.2. eCollection 2017.


Talaromyces marneffei simA Encodes a Fungal Cytochrome P450 Essential for Survival in Macrophages.

Boyce KJ, De Souza DP, Dayalan S, Pasricha S, Tull D, McConville MJ, Andrianopoulos A.

mSphere. 2018 Mar 21;3(2). pii: e00056-18. doi: 10.1128/mSphere.00056-18. eCollection 2018 Mar-Apr.


Synergy between the KEAP1/NRF2 and PI3K Pathways Drives Non-Small-Cell Lung Cancer with an Altered Immune Microenvironment.

Best SA, De Souza DP, Kersbergen A, Policheni AN, Dayalan S, Tull D, Rathi V, Gray DH, Ritchie ME, McConville MJ, Sutherland KD.

Cell Metab. 2018 Apr 3;27(4):935-943.e4. doi: 10.1016/j.cmet.2018.02.006. Epub 2018 Mar 8.


Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia.

Schneider MV, Griffin PC, Tyagi S, Flannery M, Dayalan S, Gladman S, Watson-Haigh N, Bayer PE, Charleston M, Cooke I, Cook R, Edwards RJ, Edwards D, Gorse D, McConville M, Powell D, Wilkins MR, Lonie A.

Brief Bioinform. 2019 Mar 22;20(2):384-389. doi: 10.1093/bib/bbx071.


Comparative Metabolomics of Mycoplasma bovis and Mycoplasma gallisepticum Reveals Fundamental Differences in Active Metabolic Pathways and Suggests Novel Gene Annotations.

Masukagami Y, De Souza DP, Dayalan S, Bowen C, O'Callaghan S, Kouremenos K, Nijagal B, Tull D, Tivendale KA, Markham PF, McConville MJ, Browning GF, Sansom FM.

mSystems. 2017 Oct 10;2(5). pii: e00055-17. doi: 10.1128/mSystems.00055-17. eCollection 2017 Sep-Oct.


MASTR-MS: a web-based collaborative laboratory information management system (LIMS) for metabolomics.

Hunter A, Dayalan S, De Souza D, Power B, Lorrimar R, Szabo T, Nguyen T, O'Callaghan S, Hack J, Pyke J, Nahid A, Barrero R, Roessner U, Likic V, Tull D, Bacic A, McConville M, Bellgard M.

Metabolomics. 2017;13(2):14. doi: 10.1007/s11306-016-1142-2. Epub 2016 Dec 27.


A Review of Analytical Techniques and Their Application in Disease Diagnosis in Breathomics and Salivaomics Research.

Beale DJ, Jones OA, Karpe AV, Dayalan S, Oh DY, Kouremenos KA, Ahmed W, Palombo EA.

Int J Mol Sci. 2016 Dec 23;18(1). pii: E24. doi: 10.3390/ijms18010024. Review.


Lipidomic Profiling of Adipose Tissue Reveals an Inflammatory Signature in Cancer-Related and Primary Lymphedema.

Sedger LM, Tull DL, McConville MJ, De Souza DP, Rupasinghe TW, Williams SJ, Dayalan S, Lanzer D, Mackie H, Lam TC, Boyages J.

PLoS One. 2016 May 16;11(5):e0154650. doi: 10.1371/journal.pone.0154650. eCollection 2016.


Does periodical department audit really works to make things fall in place: A Geriatric/General Oral Health Assessment Index based audit in prosthodontics.

Murthy V, Vaithilingam Y, Shivaprasad S, Yadav N, Dayalan S.

J Indian Prosthodont Soc. 2015 Apr-Jun;15(2):119-24. doi: 10.4103/0972-4052.155032.


Data standards can boost metabolomics research, and if there is a will, there is a way.

Rocca-Serra P, Salek RM, Arita M, Correa E, Dayalan S, Gonzalez-Beltran A, Ebbels T, Goodacre R, Hastings J, Haug K, Koulman A, Nikolski M, Oresic M, Sansone SA, Schober D, Smith J, Steinbeck C, Viant MR, Neumann S.

Metabolomics. 2016;12:14. doi: 10.1007/s11306-015-0879-3. Epub 2015 Nov 17. Review.


A multi-platform metabolomics approach demonstrates changes in energy metabolism and the transsulfuration pathway in Chironomus tepperi following exposure to zinc.

Long SM, Tull DL, Jeppe KJ, De Souza DP, Dayalan S, Pettigrove VJ, McConville MJ, Hoffmann AA.

Aquat Toxicol. 2015 May;162:54-65. doi: 10.1016/j.aquatox.2015.03.009. Epub 2015 Mar 10.


A brachytherapy plan evaluation tool for interstitial applications.

Anbumani S, Nambiraj NA, Dayalan S, Ganesh K, Anchineyan P, Bilimagga RS.

Adv Bioinformatics. 2014;2014:376207. doi: 10.1155/2014/376207. Epub 2014 Feb 9.


Performance characteristics and comparison of Abbott and artus real-time systems for hepatitis B virus DNA quantification.

Ismail AM, Sivakumar J, Anantharam R, Dayalan S, Samuel P, Fletcher GJ, Gnanamony M, Abraham P.

J Clin Microbiol. 2011 Sep;49(9):3215-21. doi: 10.1128/JCM.00915-11. Epub 2011 Jul 27.


Artificial leucine rich repeats as new scaffolds for protein design.

Baabur-Cohen H, Dayalan S, Shumacher I, Cohen-Luria R, Ashkenasy G.

Bioorg Med Chem Lett. 2011 Apr 15;21(8):2372-5. doi: 10.1016/j.bmcl.2011.02.093. Epub 2011 Mar 21.


Comparative study on production, purification of penicillin by Penicillium chrysogenum isolated from soil and citrus samples.

Dayalan SA, Darwin P, Prakash S.

Asian Pac J Trop Biomed. 2011 Jan;1(1):15-9. doi: 10.1016/S2221-1691(11)60061-0.


Dihedral angle and secondary structure database of short amino acid fragments.

Dayalan S, Gooneratne ND, Bevinakoppa S, Schroder H.

Bioinformation. 2006 Jan 1;1(3):78-80.

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