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Items: 1 to 50 of 92

1.

Competition for hosts modulates vast antigenic diversity to generate persistent strain structure in Plasmodium falciparum.

Pilosof S, He Q, Tiedje KE, Ruybal-Pesántez S, Day KP, Pascual M.

PLoS Biol. 2019 Jun 24;17(6):e3000336. doi: 10.1371/journal.pbio.3000336. eCollection 2019 Jun.

2.

Identifying functional groups among the diverse, recombining antigenic var genes of the malaria parasite Plasmodium falciparum from a local community in Ghana.

Rorick MM, Baskerville EB, Rask TS, Day KP, Pascual M.

PLoS Comput Biol. 2018 Jun 13;14(6):e1006174. doi: 10.1371/journal.pcbi.1006174. eCollection 2018 Jun.

3.

Networks of genetic similarity reveal non-neutral processes shape strain structure in Plasmodium falciparum.

He Q, Pilosof S, Tiedje KE, Ruybal-Pesántez S, Artzy-Randrup Y, Baskerville EB, Day KP, Pascual M.

Nat Commun. 2018 May 8;9(1):1817. doi: 10.1038/s41467-018-04219-3.

4.

Signatures of competition and strain structure within the major blood-stage antigen of Plasmodium falciparum in a local community in Ghana.

Rorick MM, Artzy-Randrup Y, Ruybal-Pesántez S, Tiedje KE, Rask TS, Oduro A, Ghansah A, Koram K, Day KP, Pascual M.

Ecol Evol. 2018 Mar 1;8(7):3574-3588. doi: 10.1002/ece3.3803. eCollection 2018 Apr.

5.

The Plasmodium falciparum transcriptome in severe malaria reveals altered expression of genes involved in important processes including surface antigen-encoding var genes.

Tonkin-Hill GQ, Trianty L, Noviyanti R, Nguyen HHT, Sebayang BF, Lampah DA, Marfurt J, Cobbold SA, Rambhatla JS, McConville MJ, Rogerson SJ, Brown GV, Day KP, Price RN, Anstey NM, Papenfuss AT, Duffy MF.

PLoS Biol. 2018 Mar 12;16(3):e2004328. doi: 10.1371/journal.pbio.2004328. eCollection 2018 Mar.

6.

A high parasite density environment induces transcriptional changes and cell death in Plasmodium falciparum blood stages.

Chou ES, Abidi SZ, Teye M, Leliwa-Sytek A, Rask TS, Cobbold SA, Tonkin-Hill GQ, Subramaniam KS, Sexton AE, Creek DJ, Daily JP, Duffy MF, Day KP.

FEBS J. 2018 Mar;285(5):848-870. doi: 10.1111/febs.14370. Epub 2018 Jan 11.

7.

Evolutionary structure of Plasmodium falciparum major variant surface antigen genes in South America: Implications for epidemic transmission and surveillance.

Rougeron V, Tiedje KE, Chen DS, Rask TS, Gamboa D, Maestre A, Musset L, Legrand E, Noya O, Yalcindag E, Renaud F, Prugnolle F, Day KP.

Ecol Evol. 2017 Oct 8;7(22):9376-9390. doi: 10.1002/ece3.3425. eCollection 2017 Nov.

8.

Population genomics of virulence genes of Plasmodium falciparum in clinical isolates from Uganda.

Ruybal-Pesántez S, Tiedje KE, Tonkin-Hill G, Rask TS, Kamya MR, Greenhouse B, Dorsey G, Duffy MF, Day KP.

Sci Rep. 2017 Sep 18;7(1):11810. doi: 10.1038/s41598-017-11814-9.

9.

Lack of Geospatial Population Structure Yet Significant Linkage Disequilibrium in the Reservoir of Plasmodium falciparum in Bongo District, Ghana.

Ruybal-Pesántez S, Tiedje KE, Rorick MM, Amenga-Etego L, Ghansah A, R Oduro A, Koram KA, Day KP.

Am J Trop Med Hyg. 2017 Oct;97(4):1180-1189. doi: 10.4269/ajtmh.17-0119. Epub 2017 Jul 19.

10.

Seasonal Variation in the Epidemiology of Asymptomatic Plasmodium falciparum Infections across Two Catchment Areas in Bongo District, Ghana.

Tiedje KE, Oduro AR, Agongo G, Anyorigiya T, Azongo D, Awine T, Ghansah A, Pascual M, Koram KA, Day KP.

Am J Trop Med Hyg. 2017 Jul;97(1):199-212. doi: 10.4269/ajtmh.16-0959.

11.

Evidence of strain structure in Plasmodium falciparum var gene repertoires in children from Gabon, West Africa.

Day KP, Artzy-Randrup Y, Tiedje KE, Rougeron V, Chen DS, Rask TS, Rorick MM, Migot-Nabias F, Deloron P, Luty AJF, Pascual M.

Proc Natl Acad Sci U S A. 2017 May 16;114(20):E4103-E4111. doi: 10.1073/pnas.1613018114. Epub 2017 May 1.

12.

Activation and clustering of a Plasmodium falciparum var gene are affected by subtelomeric sequences.

Duffy MF, Tang J, Sumardy F, Nguyen HH, Selvarajah SA, Josling GA, Day KP, Petter M, Brown GV.

FEBS J. 2017 Jan;284(2):237-257. doi: 10.1111/febs.13967. Epub 2016 Dec 9.

13.

Using expected sequence features to improve basecalling accuracy of amplicon pyrosequencing data.

Rask TS, Petersen B, Chen DS, Day KP, Pedersen AG.

BMC Bioinformatics. 2016 Apr 22;17:176. doi: 10.1186/s12859-016-1032-7.

14.

Homology blocks of Plasmodium falciparum var genes and clinically distinct forms of severe malaria in a local population.

Rorick MM, Rask TS, Baskerville EB, Day KP, Pascual M.

BMC Microbiol. 2013 Nov 6;13:244. doi: 10.1186/1471-2180-13-244.

15.

Epistatic Interactions between apolipoprotein E and hemoglobin S Genes in regulation of malaria parasitemia.

Rougeron V, Woods CM, Tiedje KE, Bodeau-Livinec F, Migot-Nabias F, Deloron P, Luty AJ, Fowkes FJ, Day KP.

PLoS One. 2013 Oct 8;8(10):e76924. doi: 10.1371/journal.pone.0076924. eCollection 2013.

16.

Hypervariable antigen genes in malaria have ancient roots.

Zilversmit MM, Chase EK, Chen DS, Awadalla P, Day KP, McVean G.

BMC Evol Biol. 2013 May 31;13:110. doi: 10.1186/1471-2148-13-110.

17.

Individual variation in levels of haptoglobin-related protein in children from Gabon.

Imrie HJ, Fowkes FJ, Migot-Nabias F, Luty AJ, Deloron P, Hajduk SL, Day KP.

PLoS One. 2012;7(11):e49816. doi: 10.1371/journal.pone.0049816. Epub 2012 Nov 20.

18.

Maternal anemia in Benin: prevalence, risk factors, and association with low birth weight.

Bodeau-Livinec F, Briand V, Berger J, Xiong X, Massougbodji A, Day KP, Cot M.

Am J Trop Med Hyg. 2011 Sep;85(3):414-20. doi: 10.4269/ajtmh.2011.10-0599.

19.

Microbiology. Quantifying malaria dynamics within the host.

Day KP, Fowkes FJ.

Science. 2011 Aug 19;333(6045):943-4. doi: 10.1126/science.1210775. No abstract available.

PMID:
21852478
20.

The stability and complexity of antibody responses to the major surface antigen of Plasmodium falciparum are associated with age in a malaria endemic area.

Barry AE, Trieu A, Fowkes FJ, Pablo J, Kalantari-Dehaghi M, Jasinskas A, Tan X, Kayala MA, Tavul L, Siba PM, Day KP, Baldi P, Felgner PL, Doolan DL.

Mol Cell Proteomics. 2011 Nov;10(11):M111.008326. doi: 10.1074/mcp.M111.008326. Epub 2011 Aug 8.

21.

A molecular epidemiological study of var gene diversity to characterize the reservoir of Plasmodium falciparum in humans in Africa.

Chen DS, Barry AE, Leliwa-Sytek A, Smith TA, Peterson I, Brown SM, Migot-Nabias F, Deloron P, Kortok MM, Marsh K, Daily JP, Ndiaye D, Sarr O, Mboup S, Day KP.

PLoS One. 2011 Feb 9;6(2):e16629. doi: 10.1371/journal.pone.0016629.

22.

The acute phase response in children with mild and severe malaria in Papua New Guinea.

O'Donnell A, Fowkes FJ, Allen SJ, Imrie H, Alpers MP, Weatherall DJ, Day KP.

Trans R Soc Trop Med Hyg. 2009 Jul;103(7):679-86. doi: 10.1016/j.trstmh.2009.03.023. Epub 2009 May 5.

PMID:
19409589
23.

Alpha+ -thalassaemia and malaria in Melanesia: epidemiological perspectives.

Fowkes FJ, Day KP.

P N G Med J. 2008 Sep-Dec;51(3-4):131-7. Review.

PMID:
21061944
24.

Increased microerythrocyte count in homozygous alpha(+)-thalassaemia contributes to protection against severe malarial anaemia.

Fowkes FJ, Allen SJ, Allen A, Alpers MP, Weatherall DJ, Day KP.

PLoS Med. 2008 Mar 18;5(3):e56. doi: 10.1371/journal.pmed.0050056.

25.

Seasonal variation in Plasmodium prevalence in a population of blue tits Cyanistes caeruleus.

Cosgrove CL, Wood MJ, Day KP, Sheldon BC.

J Anim Ecol. 2008 May;77(3):540-8. doi: 10.1111/j.1365-2656.2008.01370.x. Epub 2008 Feb 25.

PMID:
18312339
26.

Host erythrocyte polymorphisms and exposure to Plasmodium falciparum in Papua New Guinea.

Fowkes FJ, Michon P, Pilling L, Ripley RM, Tavul L, Imrie HJ, Woods CM, Mgone CS, Luty AJ, Day KP.

Malar J. 2008 Jan 3;7:1. doi: 10.1186/1475-2875-7-1.

27.

Susceptibility of Anopheles gambiae and Anopheles stephensi to tropical isolates of Plasmodium falciparum.

Hume JC, Tunnicliff M, Ranford-Cartwright LC, Day KP.

Malar J. 2007 Oct 24;6:139.

28.

Within-population variation in prevalence and lineage distribution of avian malaria in blue tits, Cyanistes caeruleus.

Wood MJ, Cosgrove CL, Wilkin TA, Knowles SC, Day KP, Sheldon BC.

Mol Ecol. 2007 Aug;16(15):3263-73.

PMID:
17651202
29.

Population genomics of the immune evasion (var) genes of Plasmodium falciparum.

Barry AE, Leliwa-Sytek A, Tavul L, Imrie H, Migot-Nabias F, Brown SM, McVean GA, Day KP.

PLoS Pathog. 2007 Mar;3(3):e34.

30.

Coamplification of Leucocytozoon by PCR diagnostic tests for avian malaria: a cautionary note.

Cosgrove CL, Day KP, Sheldon BC.

J Parasitol. 2006 Dec;92(6):1362-5.

PMID:
17304822
31.

No evidence for avian malaria infection during the nestling phase in a passerine bird.

Cosgrove CL, Knowles SC, Day KP, Sheldon BC.

J Parasitol. 2006 Dec;92(6):1302-4.

PMID:
17304811
32.

Low prevalence of an acute phase response in asymptomatic children from a malaria-endemic area of Papua New Guinea.

Imrie H, Fowkes FJ, Michon P, Tavul L, Reeder JC, Day KP.

Am J Trop Med Hyg. 2007 Feb;76(2):280-4.

PMID:
17297036
33.

Mating Patterns of Plasmodium falciparum.

Paul RE, Day KP.

Parasitol Today. 1998 May;14(5):197-202.

PMID:
17040751
34.

Genomic heterogeneity in the density of noncoding single-nucleotide and microsatellite polymorphisms in Plasmodium falciparum.

Volkman SK, Lozovsky E, Barry AE, Bedford T, Bethke L, Myrick A, Day KP, Hartl DL, Wirth DF, Sawyer SA.

Gene. 2007 Jan 31;387(1-2):1-6. Epub 2006 Aug 14.

35.

Variable SNP density in aspartyl-protease genes of the malaria parasite Plasmodium falciparum.

Barry AE, Leliwa-Sytek A, Man K, Kasper JM, Hartl DL, Day KP.

Gene. 2006 Jul 19;376(2):163-73. Epub 2006 Apr 5.

PMID:
16784823
36.

Haptoglobin levels are associated with haptoglobin genotype and alpha+ -Thalassemia in a malaria-endemic area.

Imrie H, Fowkes FJ, Michon P, Tavul L, Hume JC, Piper KP, Reeder JC, Day KP.

Am J Trop Med Hyg. 2006 Jun;74(6):965-71.

PMID:
16760505
37.

Association of haptoglobin levels with age, parasite density, and haptoglobin genotype in a malaria-endemic area of Gabon.

Fowkes FJ, Imrie H, Migot-Nabias F, Michon P, Justice A, Deloron P, Luty AJ, Day KP.

Am J Trop Med Hyg. 2006 Jan;74(1):26-30.

PMID:
16407342
38.

Association of house spraying with suppressed levels of drug resistance in Zimbabwe.

Mharakurwa S, Mutambu SL, Mudyiradima R, Chimbadzwa T, Chandiwana SK, Day KP.

Malar J. 2004 Oct 18;3:35.

39.

Light and electron microscopical observations of the effects of high-density lipoprotein on growth of Plasmodium falciparum in vitro.

Imrie H, Ferguson DJ, Carter M, Drain J, Schiflett A, Hajduk SL, Day KP.

Parasitology. 2004 Jun;128(Pt 6):577-84.

PMID:
15206459
40.

Human serum haptoglobin is toxic to Plasmodium falciparum in vitro.

Imrie H, Ferguson DJ, Day KP.

Mol Biochem Parasitol. 2004 Jan;133(1):93-8.

PMID:
14668016
41.

DNA sequence artifacts and the estimation of time to the most recent common ancestor (TMRCA) of Plasmodium falciparum.

Barry AE, Leliwa A, Choi M, Nielsen KM, Hartl DL, Day KP.

Mol Biochem Parasitol. 2003 Aug 31;130(2):143-7. No abstract available.

PMID:
12946852
43.

Cross-species regulation of Plasmodium parasitemia in semi-immune children from Papua New Guinea.

Bruce MC, Day KP.

Trends Parasitol. 2003 Jun;19(6):271-7. Review.

PMID:
12798085
44.

Human migration, mosquitoes and the evolution of Plasmodium falciparum.

Hume JC, Lyons EJ, Day KP.

Trends Parasitol. 2003 Mar;19(3):144-9. Review.

PMID:
12643998
45.

Cross-species regulation of malaria parasitaemia in the human host.

Bruce MC, Day KP.

Curr Opin Microbiol. 2002 Aug;5(4):431-7. Review.

PMID:
12160865
46.

The paradoxical population genetics of Plasmodium falciparum.

Hartl DL, Volkman SK, Nielsen KM, Barry AE, Day KP, Wirth DF, Winzeler EA.

Trends Parasitol. 2002 Jun;18(6):266-72. Review.

PMID:
12036741
47.

Epitopes for modified band 3 monoclonal antibody 1C4 are not exposed on the malaria-infected red blood cell surface.

Hayward RE, Day KP.

Mol Biochem Parasitol. 2001 Oct;117(2):235-9. No abstract available.

PMID:
11606235
48.

Recent origin of Plasmodium falciparum from a single progenitor.

Volkman SK, Barry AE, Lyons EJ, Nielsen KM, Thomas SM, Choi M, Thakore SS, Day KP, Wirth DF, Hartl DL.

Science. 2001 Jul 20;293(5529):482-4.

49.

Genotyping of Plasmodium falciparum infections by PCR: a comparative multicentre study.

Färnert A, Arez AP, Babiker HA, Beck HP, Benito A, Björkman A, Bruce MC, Conway DJ, Day KP, Henning L, Mercereau-Puijalon O, Ranford-Cartwright LC, Rubio JM, Snounou G, Walliker D, Zwetyenga J, do Rosario VE.

Trans R Soc Trop Med Hyg. 2001 Mar-Apr;95(2):225-32.

PMID:
11355566
50.

Plasmodium falciparum: histidine-rich protein II is expressed during gametocyte development.

Hayward RE, Sullivan DJ, Day KP.

Exp Parasitol. 2000 Nov;96(3):139-46.

PMID:
11162364

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