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Genetic and epigenetic editing in
nervous system

Day JJ.

Dialogues Clin Neurosci. 2019 Dec;21(4):359-368. doi: 10.31887/DCNS.2019.21.4/jday.


Increased Arctic influence on the midlatitude flow during Scandinavian Blocking episodes.

Day JJ, Sandu I, Magnusson L, Rodwell MJ, Lawrence H, Bormann N, Jung T.

Q J R Meteorol Soc. 2019 Oct;145(725):3846-3862. doi: 10.1002/qj.3673. Epub 2019 Nov 19.


Blue Light-Induced Gene Expression Alterations in Cultured Neurons Are the Result of Phototoxic Interactions with Neuronal Culture Media.

Duke CG, Savell KE, Tuscher JJ, Phillips RA 3rd, Day JJ.

eNeuro. 2020 Jan 6;7(1). pii: ENEURO.0386-19.2019. doi: 10.1523/ENEURO.0386-19.2019. Print 2020 Jan/Feb.


Multigenerational epigenetic inheritance: One step forward, two generations back.

Tuscher JJ, Day JJ.

Neurobiol Dis. 2019 Dec;132:104591. doi: 10.1016/j.nbd.2019.104591. Epub 2019 Aug 27. Review.


Comparing apples and pears: misleading conclusions about the population mental health impact of a parenting programme, a commentary on Marryat, Thompson and Wilson (2017).

Sanders MR, de Caestecker L, McLeod S, Day JJ, Turner KMT, Morawska A, Kirby J.

BMC Pediatr. 2019 Aug 5;19(1):269. doi: 10.1186/s12887-019-1570-z. Erratum in: BMC Pediatr. 2019 Oct 15;19(1):355.


Pharmacologic inhibition of LIMK1 provides dendritic spine resilience against β-amyloid.

Henderson BW, Greathouse KM, Ramdas R, Walker CK, Rao TC, Bach SV, Curtis KA, Day JJ, Mattheyses AL, Herskowitz JH.

Sci Signal. 2019 Jun 25;12(587). pii: eaaw9318. doi: 10.1126/scisignal.aaw9318.


Molecular phylogeny of Oreochromis (Cichlidae: Oreochromini) reveals mito-nuclear discordance and multiple colonisation of adverse aquatic environments.

Ford AGP, Bullen TR, Pang L, Genner MJ, Bills R, Flouri T, Ngatunga BP, Rüber L, Schliewen UK, Seehausen O, Shechonge A, Stiassny MLJ, Turner GF, Day JJ.

Mol Phylogenet Evol. 2019 Jul;136:215-226. doi: 10.1016/j.ympev.2019.04.008. Epub 2019 Apr 8.


Widespread colonisation of Tanzanian catchments by introduced Oreochromis tilapia fishes: the legacy from decades of deliberate introduction.

Shechonge A, Ngatunga BP, Bradbeer SJ, Day JJ, Freer JJ, Ford AGP, Kihedu J, Richmond T, Mzighani S, Smith AM, Sweke EA, Tamatamah R, Tyers AM, Turner GF, Genner MJ.

Hydrobiologia. 2019;832(1):235-253. doi: 10.1007/s10750-018-3597-9. Epub 2018 Apr 4.


A Neuron-Optimized CRISPR/dCas9 Activation System for Robust and Specific Gene Regulation.

Savell KE, Bach SV, Zipperly ME, Revanna JS, Goska NA, Tuscher JJ, Duke CG, Sultan FA, Burke JN, Williams D, Ianov L, Day JJ.

eNeuro. 2019 Mar 7;6(1). pii: ENEURO.0495-18.2019. doi: 10.1523/ENEURO.0495-18.2019. eCollection 2019 Jan-Feb.


Genomic Enhancers in Brain Health and Disease.

Carullo NVN, Day JJ.

Genes (Basel). 2019 Jan 14;10(1). pii: E43. doi: 10.3390/genes10010043. Review.


Exploring scale validity and measurement invariance of the Toronto Mindfulness Scale across levels of meditation experience and proficiency.

Ireland MJ, Day JJ, Clough BA.

J Clin Psychol. 2019 Mar;75(3):445-461. doi: 10.1002/jclp.22709. Epub 2018 Nov 15.


O→S Relay Deprotection: A General Approach to Controllable Donors of Reactive Sulfur Species.

Kang J, Xu S, Radford MN, Zhang W, Kelly SS, Day JJ, Xian M.

Angew Chem Int Ed Engl. 2018 May 14;57(20):5893-5897. doi: 10.1002/anie.201802845. Epub 2018 Apr 19.


Contrasting geographic structure in evolutionarily divergent Lake Tanganyika catfishes.

Peart CR, Dasmahapatra KK, Day JJ.

Ecol Evol. 2018 Feb 6;8(5):2688-2697. doi: 10.1002/ece3.3860. eCollection 2018 Mar.


Cell-Specific Deletion of PGC-1α from Medium Spiny Neurons Causes Transcriptional Alterations and Age-Related Motor Impairment.

McMeekin LJ, Li Y, Fox SN, Rowe GC, Crossman DK, Day JJ, Li Y, Detloff PJ, Cowell RM.

J Neurosci. 2018 Mar 28;38(13):3273-3286. doi: 10.1523/JNEUROSCI.0848-17.2018. Epub 2018 Feb 28.


Learning and Age-Related Changes in Genome-wide H2A.Z Binding in the Mouse Hippocampus.

Stefanelli G, Azam AB, Walters BJ, Brimble MA, Gettens CP, Bouchard-Cannon P, Cheng HM, Davidoff AM, Narkaj K, Day JJ, Kennedy AJ, Zovkic IB.

Cell Rep. 2018 Jan 30;22(5):1124-1131. doi: 10.1016/j.celrep.2018.01.020.


Hippocampal Transcriptomic Profiles: Subfield Vulnerability to Age and Cognitive Impairment.

Ianov L, De Both M, Chawla MK, Rani A, Kennedy AJ, Piras I, Day JJ, Siniard A, Kumar A, Sweatt JD, Barnes CA, Huentelman MJ, Foster TC.

Front Aging Neurosci. 2017 Dec 8;9:383. doi: 10.3389/fnagi.2017.00383. eCollection 2017.


Applications of CRISPR/Cas9 in the Mammalian Central Nervous System.

Savell KE, Day JJ.

Yale J Biol Med. 2017 Dec 19;90(4):567-581. eCollection 2017 Dec. Review.


A General Strategy for Development of Near-Infrared Fluorescent Probes for Bioimaging.

Chen W, Xu S, Day JJ, Wang D, Xian M.

Angew Chem Int Ed Engl. 2017 Dec 22;56(52):16611-16615. doi: 10.1002/anie.201710688. Epub 2017 Nov 30.


Can the Perceived Barriers to Psychological Treatment Scale be used to investigate treatment barriers among females with disordered and non-disordered eating behaviours?

Innes NT, Clough BA, Day JJ, Casey LM.

Psychiatry Res. 2018 Jan;259:68-76. doi: 10.1016/j.psychres.2017.09.070. Epub 2017 Sep 28.


Recent Development of Hydrogen Sulfide Releasing/Stimulating Reagents and Their Potential Applications in Cancer and Glycometabolic Disorders.

Yang CT, Chen L, Xu S, Day JJ, Li X, Xian M.

Front Pharmacol. 2017 Sep 26;8:664. doi: 10.3389/fphar.2017.00664. eCollection 2017. Review.


Benzothiazole Sulfinate: A Sulfinic Acid Transfer Reagent under Oxidation-Free Conditions.

Day JJ, Neill DL, Xu S, Xian M.

Org Lett. 2017 Jul 21;19(14):3819-3822. doi: 10.1021/acs.orglett.7b01693. Epub 2017 Jul 3.


Experience-dependent epigenomic reorganization in the hippocampus.

Duke CG, Kennedy AJ, Gavin CF, Day JJ, Sweatt JD.

Learn Mem. 2017 Jun 15;24(7):278-288. doi: 10.1101/lm.045112.117. Print 2017 Jul.


Slow generation of hydrogen sulfide from sulfane sulfurs and NADH models.

Peng B, Liu C, Li Z, Day JJ, Lu Y, Lefer DJ, Xian M.

Bioorg Med Chem Lett. 2017 Feb 1;27(3):542-545. doi: 10.1016/j.bmcl.2016.12.023. Epub 2016 Dec 9.


Niche divergence facilitated by fine-scale ecological partitioning in a recent cichlid fish adaptive radiation.

Ford AG, Rüber L, Newton J, Dasmahapatra KK, Balarin JD, Bruun K, Day JJ.

Evolution. 2016 Dec;70(12):2718-2735. doi: 10.1111/evo.13072. Epub 2016 Oct 21.


Neonatal maternal separation stress elicits lasting DNA methylation changes in the hippocampus of stress-reactive Wistar Kyoto rats.

McCoy CR, Rana S, Stringfellow SA, Day JJ, Wyss JM, Clinton SM, Kerman IA.

Eur J Neurosci. 2016 Nov;44(10):2829-2845. doi: 10.1111/ejn.13404. Epub 2016 Oct 16.


Tcf4 Regulates Synaptic Plasticity, DNA Methylation, and Memory Function.

Kennedy AJ, Rahn EJ, Paulukaitis BS, Savell KE, Kordasiewicz HB, Wang J, Lewis JW, Posey J, Strange SK, Guzman-Karlsson MC, Phillips SE, Decker K, Motley ST, Swayze EE, Ecker DJ, Michael TP, Day JJ, Sweatt JD.

Cell Rep. 2016 Sep 6;16(10):2666-2685. doi: 10.1016/j.celrep.2016.08.004. Epub 2016 Aug 25.


Diversification of clearwing butterflies with the rise of the Andes.

De-Silva DL, Elias M, Willmott K, Mallet J, Day JJ.

J Biogeogr. 2016 Jan;43(1):44-58. Epub 2015 Sep 24.


A Single Fluorescent Probe to Visualize Hydrogen Sulfide and Hydrogen Polysulfides with Different Fluorescence Signals.

Chen W, Pacheco A, Takano Y, Day JJ, Hanaoka K, Xian M.

Angew Chem Int Ed Engl. 2016 Aug 16;55(34):9993-6. doi: 10.1002/anie.201604892. Epub 2016 Jul 13.


Extra-coding RNAs regulate neuronal DNA methylation dynamics.

Savell KE, Gallus NV, Simon RC, Brown JA, Revanna JS, Osborn MK, Song EY, O'Malley JJ, Stackhouse CT, Norvil A, Gowher H, Sweatt JD, Day JJ.

Nat Commun. 2016 Jul 7;7:12091. doi: 10.1038/ncomms12091.


Dopamine and opioid systems interact within the nucleus accumbens to maintain monogamous pair bonds.

Resendez SL, Keyes PC, Day JJ, Hambro C, Austin CJ, Maina FK, Eidson LN, Porter-Stransky KA, Nevárez N, McLean JW, Kuhnmuench MA, Murphy AZ, Mathews TA, Aragona BJ.

Elife. 2016 Jul 2;5. pii: e15325. doi: 10.7554/eLife.15325.


Next-Generation Mitogenomics: A Comparison of Approaches Applied to Caecilian Amphibian Phylogeny.

Maddock ST, Briscoe AG, Wilkinson M, Waeschenbach A, San Mauro D, Day JJ, Littlewood DT, Foster PG, Nussbaum RA, Gower DJ.

PLoS One. 2016 Jun 9;11(6):e0156757. doi: 10.1371/journal.pone.0156757. eCollection 2016.


Benzothiazole Sulfinate: a Water-Soluble and Slow-Releasing Sulfur Dioxide Donor.

Day JJ, Yang Z, Chen W, Pacheco A, Xian M.

ACS Chem Biol. 2016 Jun 17;11(6):1647-51. doi: 10.1021/acschembio.6b00106. Epub 2016 Apr 7.


9-Fluorenylmethyl (Fm) Disulfides: Biomimetic Precursors for Persulfides.

Park CM, Johnson BA, Duan J, Park JJ, Day JJ, Gang D, Qian WJ, Xian M.

Org Lett. 2016 Mar 4;18(5):904-7. doi: 10.1021/acs.orglett.5b03557. Epub 2016 Feb 12.


Evolution along the Great Rift Valley: phenotypic and genetic differentiation of East African white-eyes (Aves, Zosteropidae).

Habel JC, Borghesio L, Newmark WD, Day JJ, Lens L, Husemann M, Ulrich W.

Ecol Evol. 2015 Oct 12;5(21):4849-62. doi: 10.1002/ece3.1735. eCollection 2015 Nov.


DNA methylation regulates neuronal glutamatergic synaptic scaling.

Meadows JP, Guzman-Karlsson MC, Phillips S, Holleman C, Posey JL, Day JJ, Hablitz JJ, Sweatt JD.

Sci Signal. 2015 Jun 23;8(382):ra61. doi: 10.1126/scisignal.aab0715.


High levels of interspecific gene flow in an endemic cichlid fish adaptive radiation from an extreme lake environment.

Ford AG, Dasmahapatra KK, Rüber L, Gharbi K, Cezard T, Day JJ.

Mol Ecol. 2015 Jul;24(13):3421-40. doi: 10.1111/mec.13247. Epub 2015 Jun 19.


Persulfides: current knowledge and challenges in chemistry and chemical biology.

Park CM, Weerasinghe L, Day JJ, Fukuto JM, Xian M.

Mol Biosyst. 2015 Jul;11(7):1775-85. doi: 10.1039/c5mb00216h. Review.


DNA methylation slows effects of C9orf72 mutations: An epigenetic brake on genetic inheritance.

Day JJ, Roberson ED.

Neurology. 2015 Apr 21;84(16):1616-7. doi: 10.1212/WNL.0000000000001504. Epub 2015 Mar 20. No abstract available.


New approaches to manipulating the epigenome.

Day JJ.

Dialogues Clin Neurosci. 2014 Sep;16(3):345-57. Review.


DNA methylation and its implications and accessibility for neuropsychiatric therapeutics.

Day JJ, Kennedy AJ, Sweatt JD.

Annu Rev Pharmacol Toxicol. 2015;55:591-611. doi: 10.1146/annurev-pharmtox-010814-124527. Epub 2014 Oct 17. Review.


Histone H2A.Z subunit exchange controls consolidation of recent and remote memory.

Zovkic IB, Paulukaitis BS, Day JJ, Etikala DM, Sweatt JD.

Nature. 2014 Nov 27;515(7528):582-6. doi: 10.1038/nature13707. Epub 2014 Sep 14.


Niche divergence promotes rapid diversification of East African sky island white-eyes (Aves: Zosteropidae).

Cox SC, Prys-Jones RP, Habel JC, Amakobe BA, Day JJ.

Mol Ecol. 2014 Aug;23(16):4103-18. doi: 10.1111/mec.12840. Epub 2014 Jul 8.


The Triple P-Positive Parenting Program: a systematic review and meta-analysis of a multi-level system of parenting support.

Sanders MR, Kirby JN, Tellegen CL, Day JJ.

Clin Psychol Rev. 2014 Jun;34(4):337-57. doi: 10.1016/j.cpr.2014.04.003. Epub 2014 Apr 26. Review. Erratum in: Clin Psychol Rev. 2014 Dec;34(8):658.


Evolutionary origins and genetic variation of the Seychelles treefrog, Tachycnemis seychellensis (Duméril and Bibron, 1841) (Amphibia: Anura: Hyperoliidae).

Maddock ST, Day JJ, Nussbaum RA, Wilkinson M, Gower DJ.

Mol Phylogenet Evol. 2014 Jun;75:194-201. doi: 10.1016/j.ympev.2014.02.004. Epub 2014 Feb 17.


Nocturnal claroteine catfishes reveal dual colonisation but a single radiation in Lake Tanganyika.

Peart CR, Bills R, Wilkinson M, Day JJ.

Mol Phylogenet Evol. 2014 Apr;73:119-28. doi: 10.1016/j.ympev.2014.01.013. Epub 2014 Feb 3.


DNA methylation regulates associative reward learning.

Day JJ, Childs D, Guzman-Karlsson MC, Kibe M, Moulden J, Song E, Tahir A, Sweatt JD.

Nat Neurosci. 2013 Oct;16(10):1445-52. doi: 10.1038/nn.3504. Epub 2013 Aug 25.


Development of behavioral preferences for the optimal choice following unexpected reward omission is mediated by a reduction of D2-like receptor tone in the nucleus accumbens.

Porter-Stransky KA, Seiler JL, Day JJ, Aragona BJ.

Eur J Neurosci. 2013 Aug;38(4):2572-88. doi: 10.1111/ejn.12253. Epub 2013 May 22.


Continental diversification of an African catfish radiation (Mochokidae: Synodontis).

Day JJ, Peart CR, Brown KJ, Friel JP, Bills R, Moritz T.

Syst Biol. 2013 May 1;62(3):351-65. doi: 10.1093/sysbio/syt001. Epub 2013 Jan 9.


Direct bisulfite sequencing for examination of DNA methylation with gene and nucleotide resolution from brain tissues.

Parrish RR, Day JJ, Lubin FD.

Curr Protoc Neurosci. 2012 Jul;Chapter 7:Unit 7.24. doi: 10.1002/0471142301.ns0724s60.

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