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Items: 34

1.

Coarse-Grained Modeling of the Interplay between Secondary Structure Propensities and Protein Fold Assembly.

Dawid AE, Gront D, Kolinski A.

J Chem Theory Comput. 2018 Apr 10;14(4):2277-2287. doi: 10.1021/acs.jctc.7b01242. Epub 2018 Mar 6.

2.

SURPASS Low-Resolution Coarse-Grained Protein Modeling.

Dawid AE, Gront D, Kolinski A.

J Chem Theory Comput. 2017 Nov 14;13(11):5766-5779. doi: 10.1021/acs.jctc.7b00642. Epub 2017 Oct 23.

PMID:
28992694
3.

Forensic likelihood ratio: Statistical problems and pitfalls.

Dawid AP.

Sci Justice. 2017 Jan;57(1):73-75. doi: 10.1016/j.scijus.2016.09.002. Epub 2016 Dec 12.

PMID:
28063590
4.

Coarse-Grained Protein Models and Their Applications.

Kmiecik S, Gront D, Kolinski M, Wieteska L, Dawid AE, Kolinski A.

Chem Rev. 2016 Jul 27;116(14):7898-936. doi: 10.1021/acs.chemrev.6b00163. Epub 2016 Jun 22. Review.

5.

Breaking evolutionary constraint with a tradeoff ratchet.

de Vos MG, Dawid A, Sunderlikova V, Tans SJ.

Proc Natl Acad Sci U S A. 2015 Dec 1;112(48):14906-11. doi: 10.1073/pnas.1510282112. Epub 2015 Nov 13.

6.

A Formal Treatment of Sequential Ignorability.

Dawid AP, Constantinou P.

Stat Biosci. 2014;6(2):166-188. Epub 2014 Apr 8.

7.

The influence of distribution of hydroxyl groups on vibrational spectra of fullerenol C60(OH)24 isomers: DFT study.

Dawid A, Górny K, Gburski Z.

Spectrochim Acta A Mol Biomol Spectrosc. 2015 Feb 5;136:1993-7. doi: 10.1016/j.saa.2014.08.023. Epub 2014 Aug 28.

PMID:
25223813
8.

Delivery of nitric oxide to the interior of mammalian cell by carbon nanotube: MD simulation.

Raczyński P, Górny K, Dawid A, Gburski Z.

Arch Biochem Biophys. 2014 Jul 15;554:6-10. doi: 10.1016/j.abb.2014.04.014. Epub 2014 May 4.

PMID:
24796224
9.

Collision-induced light scattering in a thin xenon layer between graphite slabs - MD study.

Dawid A, Górny K, Wojcieszyk D, Dendzik Z, Gburski Z.

Spectrochim Acta A Mol Biomol Spectrosc. 2014 Aug 14;129:594-600. doi: 10.1016/j.saa.2014.03.101. Epub 2014 Apr 4.

PMID:
24755364
10.

Deep determinism and the assessment of mechanistic interaction.

Berzuini C, Dawid AP.

Biostatistics. 2013 Jul;14(3):502-13. doi: 10.1093/biostatistics/kxs049. Epub 2012 Dec 19.

11.

Quantitative prediction of the phase diagram of DNA-functionalized nanosized colloids.

Mladek BM, Fornleitner J, Martinez-Veracoechea FJ, Dawid A, Frenkel D.

Phys Rev Lett. 2012 Jun 29;108(26):268301. Epub 2012 Jun 25.

PMID:
23005018
12.

The structural studies of fullerenol C60(OH)24 and nitric oxide mixture in water solvent - MD simulation.

Dawid A, Górny K, Gburski Z.

Nitric Oxide. 2011 Nov 30;25(4):373-80. doi: 10.1016/j.niox.2011.08.004. Epub 2011 Sep 16.

PMID:
21945054
13.

Probabilistic sensitivity analysis in health economics.

Baio G, Dawid AP.

Stat Methods Med Res. 2015 Dec;24(6):615-34. doi: 10.1177/0962280211419832. Epub 2011 Sep 18. Review.

PMID:
21930515
14.

Response to: DNA identification by pedigree likelihood ratio accommodating population substructure and mutations.

Egeland T, Dawid AP, Mortera J, Mostad P, Tillmar A.

Investig Genet. 2011 Mar 25;2:7. doi: 10.1186/2041-2223-2-7.

15.
16.

The properties of small fullerenol cluster (C60(OH)24)7: computer simulation.

Piątek A, Dawid A, Gburski Z.

Spectrochim Acta A Mol Biomol Spectrosc. 2011 Aug 15;79(4):819-23. doi: 10.1016/j.saa.2010.08.059. Epub 2010 Sep 22.

PMID:
20864388
17.

Multiple peaks and reciprocal sign epistasis in an empirically determined genotype-phenotype landscape.

Dawid A, Kiviet DJ, Kogenaru M, de Vos M, Tans SJ.

Chaos. 2010 Jun;20(2):026105. doi: 10.1063/1.3453602.

PMID:
20590334
18.

A nanostructure made of a bacterial noncoding RNA.

Cayrol B, Nogues C, Dawid A, Sagi I, Silberzan P, Isambert H.

J Am Chem Soc. 2009 Dec 2;131(47):17270-6. doi: 10.1021/ja906076e.

PMID:
19821568
19.

RNA synthetic biology inspired from bacteria: construction of transcription attenuators under antisense regulation.

Dawid A, Cayrol B, Isambert H.

Phys Biol. 2009 Jul 1;6(2):025007. doi: 10.1088/1478-3975/6/2/025007.

PMID:
19571368
20.

Estimating mutation rates from paternity casework.

Vicard P, Dawid AP, Mortera J, Lauritzen SL.

Forensic Sci Int Genet. 2008 Jan;2(1):9-18. doi: 10.1016/j.fsigen.2007.07.002. Epub 2007 Oct 24.

PMID:
19083784
21.

The influence of the carbon nanotube on the structural and dynamical properties of cholesterol cluster.

Raczyński P, Dawid A, Sokół M, Gburski Z.

Biomol Eng. 2007 Nov;24(5):572-6. Epub 2007 Aug 7.

PMID:
17977066
22.

Molecular dynamics (MD) in homocysteine nanosystems - computer simulation.

Raczyński P, Dawid A, Gburski Z.

Biomol Eng. 2007 Nov;24(5):577-81. Epub 2007 Aug 7.

PMID:
17888723
23.

Object-oriented Bayesian networks for complex forensic DNA profiling problems.

Dawid AP, Mortera J, Vicard P.

Forensic Sci Int. 2007 Jul 4;169(2-3):195-205. Epub 2006 Oct 20.

PMID:
17055679
24.

The existence of a plastic phase and a solid-liquid dynamical bistability region in small fullerene cluster (C(60))(7): molecular dynamics simulation.

Piątek A, Dawid A, Gburski Z.

J Phys Condens Matter. 2006 Sep 20;18(37):8471-80. doi: 10.1088/0953-8984/18/37/006. Epub 2006 Sep 1.

PMID:
21690901
25.

DNA mechanics as a tool to probe helicase and translocase activity.

Lionnet T, Dawid A, Bigot S, Barre FX, Saleh OA, Heslot F, Allemand JF, Bensimon D, Croquette V.

Nucleic Acids Res. 2006;34(15):4232-44. Epub 2006 Aug 25.

26.

Mechanically controlled DNA extrusion from a palindromic sequence by single molecule micromanipulation.

Dawid A, Guillemot F, Brème C, Croquette V, Heslot F.

Phys Rev Lett. 2006 May 12;96(18):188102. Epub 2006 May 10.

PMID:
16712400
27.

Remarks on: "Paternity analysis in special fatherless cases without direct testing of alleged father" [Forensic Science International 146S (2004) S159-S161].

Vicard P, Dawid AP.

Forensic Sci Int. 2006 Nov 10;163(1-2):158-60. Epub 2006 Jan 10. No abstract available.

PMID:
16376502
28.

Single-molecule study of RuvAB-mediated Holliday-junction migration.

Dawid A, Croquette V, Grigoriev M, Heslot F.

Proc Natl Acad Sci U S A. 2004 Aug 10;101(32):11611-6. Epub 2004 Aug 3. Erratum in: Proc Natl Acad Sci U S A. 2006 Aug 15;103(33):12654.

29.

A statistical treatment of biases affecting the estimation of mutation rates.

Vicard P, Dawid AP.

Mutat Res. 2004 Mar 22;547(1-2):19-33.

PMID:
15013695
30.

Probabilistic expert systems for DNA mixture profiling.

Mortera J, Dawid AP, Lauritzen SL.

Theor Popul Biol. 2003 May;63(3):191-205.

PMID:
12689791
31.

Counterfactuals: help or hindrance?

Dawid AP.

Int J Epidemiol. 2002 Apr;31(2):429-30; discussion 435-8. No abstract available.

PMID:
11980808
32.

Non-fatherhood or mutation? A probabilistic approach to parental exclusion in paternity testing.

Dawid AP, Mortera J, Pascali VL.

Forensic Sci Int. 2001 Dec 15;124(1):55-61.

PMID:
11741761
33.
34.

Properties of diagnostic data distributions.

Dawid AP.

Biometrics. 1976 Sep;32(3):647-58.

PMID:
963177

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