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Items: 26

1.

NK Response Correlates with HIV Decrease in Pegylated IFN-α2a-Treated Antiretroviral Therapy-Suppressed Subjects.

Papasavvas E, Azzoni L, Kossenkov AV, Dawany N, Morales KH, Fair M, Ross BN, Lynn K, Mackiewicz A, Mounzer K, Tebas P, Jacobson JM, Kostman JR, Showe L, Montaner LJ.

J Immunol. 2019 Jun 28. pii: ji1801511. doi: 10.4049/jimmunol.1801511. [Epub ahead of print]

PMID:
31253727
2.

Correction: A novel human IL2RB mutation results in T and NK cell-driven immune dysregulation.

Fernandez IZ, Baxter RM, Garcia-Perez JE, Vendrame E, Ranganath T, Kong DS, Lundquist K, Nguyen T, Ogolla S, Black J, Galambos C, Gumbart JC, Dawany N, Kelsen JR, de Zoeten EF, Quinones R, Eissa H, Verneris MR, Sullivan KE, Rochford R, Blish CA, Kedl RM, Dutmer CM, Hsieh EWY.

J Exp Med. 2019 Jun 3;216(6):1465. doi: 10.1084/jem.2018201505102019c. Epub 2019 May 14. No abstract available.

3.

A novel human IL2RB mutation results in T and NK cell-driven immune dysregulation.

Fernandez IZ, Baxter RM, Garcia-Perez JE, Vendrame E, Ranganath T, Kong DS, Lundquist K, Nguyen T, Ogolla S, Black J, Galambos C, Gumbart JC, Dawany N, Kelsen JR, de Zoeten EF, Quinones R, Eissa H, Verneris MR, Sullivan KE, Rochford R, Blish CA, Kedl RM, Dutmer CM, Hsieh EWY.

J Exp Med. 2019 Jun 3;216(6):1255-1267. doi: 10.1084/jem.20182015. Epub 2019 Apr 30. Erratum in: J Exp Med. 2019 May 14;:.

PMID:
31040184
4.

The Pediatric Cell Atlas: Defining the Growth Phase of Human Development at Single-Cell Resolution.

Taylor DM, Aronow BJ, Tan K, Bernt K, Salomonis N, Greene CS, Frolova A, Henrickson SE, Wells A, Pei L, Jaiswal JK, Whitsett J, Hamilton KE, MacParland SA, Kelsen J, Heuckeroth RO, Potter SS, Vella LA, Terry NA, Ghanem LR, Kennedy BC, Helbig I, Sullivan KE, Castelo-Soccio L, Kreigstein A, Herse F, Nawijn MC, Koppelman GH, Haendel M, Harris NL, Rokita JL, Zhang Y, Regev A, Rozenblatt-Rosen O, Rood JE, Tickle TL, Vento-Tormo R, Alimohamed S, Lek M, Mar JC, Loomes KM, Barrett DM, Uapinyoying P, Beggs AH, Agrawal PB, Chen YW, Muir AB, Garmire LX, Snapper SB, Nazarian J, Seeholzer SH, Fazelinia H, Singh LN, Faryabi RB, Raman P, Dawany N, Xie HM, Devkota B, Diskin SJ, Anderson SA, Rappaport EF, Peranteau W, Wikenheiser-Brokamp KA, Teichmann S, Wallace D, Peng T, Ding YY, Kim MS, Xing Y, Kong SW, Bönnemann CG, Mandl KD, White PS.

Dev Cell. 2019 Apr 8;49(1):10-29. doi: 10.1016/j.devcel.2019.03.001. Epub 2019 Mar 28. Review.

5.

Distinct Histopathological Features at Diagnosis of Very Early Onset Inflammatory Bowel Disease.

Conrad MA, Carreon CK, Dawany N, Russo P, Kelsen JR.

J Crohns Colitis. 2019 Apr 26;13(5):615-625. doi: 10.1093/ecco-jcc/jjy212.

PMID:
30551128
6.

A Gene Expression Classifier from Whole Blood Distinguishes Benign from Malignant Lung Nodules Detected by Low-Dose CT.

Kossenkov AV, Qureshi R, Dawany NB, Wickramasinghe J, Liu Q, Majumdar RS, Chang C, Widura S, Kumar T, Horng WH, Konnisto E, Criner G, Tsay JJ, Pass H, Yendamuri S, Vachani A, Bauer T, Nam B, Rom WN, Showe MK, Showe LC.

Cancer Res. 2019 Jan 1;79(1):263-273. doi: 10.1158/0008-5472.CAN-18-2032. Epub 2018 Nov 28.

PMID:
30487137
7.

Mevalonate kinase deficiency presenting as recurrent rectal abscesses and perianal fistulae.

Dunn K, Pasternak B, Kelsen JR, Sullivan KE, Dawany N, Wright BL.

Ann Allergy Asthma Immunol. 2018 Feb;120(2):214-215. doi: 10.1016/j.anai.2017.11.011. Epub 2017 Dec 28. No abstract available.

8.

Novel ZBTB24 Mutation Associated with Immunodeficiency, Centromere Instability, and Facial Anomalies Type-2 Syndrome Identified in a Patient with Very Early Onset Inflammatory Bowel Disease.

Conrad MA, Dawany N, Sullivan KE, Devoto M, Kelsen JR.

Inflamm Bowel Dis. 2017 Dec;23(12):2252-2255. doi: 10.1097/MIB.0000000000001280.

9.

Commentary on Mutations in Interleukin-10 Receptor and Clinical Phenotypes in Patients with Very Early-onset Inflammatory Bowel Disease: A Chinese VEO-IBD Collaboration Group Survey.

Kelsen JR, Dawany N, Conrad M, Devoto M.

Inflamm Bowel Dis. 2017 Apr;23(4):591-592. doi: 10.1097/MIB.0000000000001028. No abstract available.

PMID:
28267048
10.

Diverting Ileostomy for the Treatment of Severe, Refractory, Pediatric Inflammatory Bowel Disease.

Maxwell EC, Dawany N, Baldassano RN, Mamula P, Mattei P, Albenberg L, Kelsen JR.

J Pediatr Gastroenterol Nutr. 2017 Sep;65(3):299-305. doi: 10.1097/MPG.0000000000001498.

PMID:
28045769
11.
12.

Vedolizumab Therapy in Severe Pediatric Inflammatory Bowel Disease.

Conrad MA, Stein RE, Maxwell EC, Albenberg L, Baldassano RN, Dawany N, Grossman AB, Mamula P, Piccoli DA, Kelsen JR.

Inflamm Bowel Dis. 2016 Oct;22(10):2425-31. doi: 10.1097/MIB.0000000000000918.

PMID:
27598742
13.

Age-related changes in the transcriptome of antibody-secreting cells.

Kannan S, Dawany N, Kurupati R, Showe LC, Ertl HC.

Oncotarget. 2016 Mar 22;7(12):13340-53. doi: 10.18632/oncotarget.7958.

14.

H3K4 tri-methylation breadth at transcription start sites impacts the transcriptome of systemic lupus erythematosus.

Zhang Z, Shi L, Dawany N, Kelsen J, Petri MA, Sullivan KE.

Clin Epigenetics. 2016 Feb 2;8:14. doi: 10.1186/s13148-016-0179-4. eCollection 2016.

15.

Erratum to: A de novo whole gene deletion of XIAP detected by exome sequencing analysis in very early onset inflammatory bowel disease: a case report.

Kelsen JR, Dawany N, Martinez A, Grochowski CM, Maurer K, Rappaport E, Piccoli DA, Baldassano RN, Mamula P, Sullivan KE, Devoto M.

BMC Gastroenterol. 2015 Dec 18;15:179. doi: 10.1186/s12876-015-0412-1. No abstract available.

16.

A de novo whole gene deletion of XIAP detected by exome sequencing analysis in very early onset inflammatory bowel disease: a case report.

Kelsen JR, Dawany N, Martinez A, Grochowski CM, Maurer K, Rappaport E, Piccoli DA, Baldassano RN, Mamula P, Sullivan KE, Devoto M.

BMC Gastroenterol. 2015 Nov 18;15:160. doi: 10.1186/s12876-015-0394-z. Erratum in: BMC Gastroenterol. 2015;15:179. Martinez, Alejuandro [corrected to Martinez, Alejandro].

17.

Identification of MEF2B, EBF1, and IL6R as Direct Gene Targets of Epstein-Barr Virus (EBV) Nuclear Antigen 1 Critical for EBV-Infected B-Lymphocyte Survival.

Tempera I, De Leo A, Kossenkov AV, Cesaroni M, Song H, Dawany N, Showe L, Lu F, Wikramasinghe P, Lieberman PM.

J Virol. 2015 Oct 14;90(1):345-55. doi: 10.1128/JVI.02318-15. Print 2016 Jan 1.

18.

Exome sequencing analysis reveals variants in primary immunodeficiency genes in patients with very early onset inflammatory bowel disease.

Kelsen JR, Dawany N, Moran CJ, Petersen BS, Sarmady M, Sasson A, Pauly-Hubbard H, Martinez A, Maurer K, Soong J, Rappaport E, Franke A, Keller A, Winter HS, Mamula P, Piccoli D, Artis D, Sonnenberg GF, Daly M, Sullivan KE, Baldassano RN, Devoto M.

Gastroenterology. 2015 Nov;149(6):1415-24. doi: 10.1053/j.gastro.2015.07.006. Epub 2015 Jul 17.

19.

Identification of a 251 gene expression signature that can accurately detect M. tuberculosis in patients with and without HIV co-infection.

Dawany N, Showe LC, Kossenkov AV, Chang C, Ive P, Conradie F, Stevens W, Sanne I, Azzoni L, Montaner LJ.

PLoS One. 2014 Feb 25;9(2):e89925. doi: 10.1371/journal.pone.0089925. eCollection 2014.

20.

The p130 isoform of angiomotin is required for Yap-mediated hepatic epithelial cell proliferation and tumorigenesis.

Yi C, Shen Z, Stemmer-Rachamimov A, Dawany N, Troutman S, Showe LC, Liu Q, Shimono A, Sudol M, Holmgren L, Stanger BZ, Kissil JL.

Sci Signal. 2013 Sep 3;6(291):ra77. doi: 10.1126/scisignal.2004060.

21.

Bioinformatics analysis reveals transcriptome and microRNA signatures and drug repositioning targets for IBD and other autoimmune diseases.

Clark PM, Dawany N, Dampier W, Byers SW, Pestell RG, Tozeren A.

Inflamm Bowel Dis. 2012 Dec;18(12):2315-33. doi: 10.1002/ibd.22958. Epub 2012 Apr 5.

PMID:
22488912
22.

Peripheral immune cell gene expression predicts survival of patients with non-small cell lung cancer.

Kossenkov AV, Dawany N, Evans TL, Kucharczuk JC, Albelda SM, Showe LC, Showe MK, Vachani A.

PLoS One. 2012;7(3):e34392. doi: 10.1371/journal.pone.0034392. Epub 2012 Mar 29.

23.

Genome-wide maps of circulating miRNA biomarkers for ulcerative colitis.

Duttagupta R, DiRienzo S, Jiang R, Bowers J, Gollub J, Kao J, Kearney K, Rudolph D, Dawany NB, Showe MK, Stamato T, Getts RC, Jones KW.

PLoS One. 2012;7(2):e31241. doi: 10.1371/journal.pone.0031241. Epub 2012 Feb 16.

24.

Synergistic enhancement of cellular immune responses by the novel Toll receptor 7/8 agonist 3M-007 and interferon-γ: implications for therapy of cutaneous T-cell lymphoma.

Wysocka M, Dawany N, Benoit B, Kossenkov AV, Troxel AB, Gelfand JM, Sell MK, Showe LC, Rook AH.

Leuk Lymphoma. 2011 Oct;52(10):1970-9. doi: 10.3109/10428194.2011.582202.

25.

Large-scale integration of microarray data reveals genes and pathways common to multiple cancer types.

Dawany NB, Dampier WN, Tozeren A.

Int J Cancer. 2011 Jun 15;128(12):2881-91. doi: 10.1002/ijc.25854. Epub 2011 Apr 11.

26.

Asymmetric microarray data produces gene lists highly predictive of research literature on multiple cancer types.

Dawany NB, Tozeren A.

BMC Bioinformatics. 2010 Sep 27;11:483. doi: 10.1186/1471-2105-11-483.

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