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Items: 1 to 50 of 266

1.

Water lily (Nymphaea thermarum) genome reveals variable genomic signatures of ancient vascular cambium losses.

Povilus RA, DaCosta JM, Grassa C, Satyaki PRV, Moeglein M, Jaenisch J, Xi Z, Mathews S, Gehring M, Davis CC, Friedman WE.

Proc Natl Acad Sci U S A. 2020 Mar 31. pii: 201922873. doi: 10.1073/pnas.1922873117. [Epub ahead of print]

PMID:
32234787
2.

Lossy wavefront sensing and correction of distorted laser beams.

Wu C, Ko J, Davis CC.

Appl Opt. 2020 Jan 20;59(3):817-824. doi: 10.1364/AO.59.000817.

PMID:
32225223
3.

Light field camera study of near-ground turbulence anisotropy and observation of small outer-scales.

Wu C, Paulson DA, Rzasa JR, Davis CC.

Opt Lett. 2020 Mar 1;45(5):1156-1159. doi: 10.1364/OL.386444.

PMID:
32108794
4.

Prickly waterlily and rigid hornwort genomes shed light on early angiosperm evolution.

Yang Y, Sun P, Lv L, Wang D, Ru D, Li Y, Ma T, Zhang L, Shen X, Meng F, Jiao B, Shan L, Liu M, Wang Q, Qin Z, Xi Z, Wang X, Davis CC, Liu J.

Nat Plants. 2020 Mar;6(3):215-222. doi: 10.1038/s41477-020-0594-6. Epub 2020 Feb 24.

PMID:
32094642
5.

Lamivudine-resistant HIVM184V is durably suppressed with dolutegravir plus lamivudine dual therapy in humanised mice.

Medina-Moreno S, Zapata JC, Kashanchi F, Le NM, Hassounah S, Mesplede T, Oliveira M, Davis CC, Heredia A.

J Glob Antimicrob Resist. 2020 Mar;20:316-317. doi: 10.1016/j.jgar.2020.01.018. Epub 2020 Feb 13. No abstract available.

6.

Occurrence and distribution of hexavalent chromium in groundwater from North Carolina, USA.

Coyte RM, McKinley KL, Jiang S, Karr J, Dwyer GS, Keyworth AJ, Davis CC, Kondash AJ, Vengosh A.

Sci Total Environ. 2020 Apr 1;711:135135. doi: 10.1016/j.scitotenv.2019.135135. Epub 2019 Nov 12.

PMID:
32000345
7.

Diverse trajectories of plastome degradation in holoparasitic Cistanche and genomic location of the lost plastid genes.

Liu X, Fu W, Tang Y, Zhang W, Song Z, Li L, Yang J, Ma H, Yang J, Zhou C, Davis CC, Wang Y.

J Exp Bot. 2020 Jan 23;71(3):877-892. doi: 10.1093/jxb/erz456.

PMID:
31639183
8.

Olaparib: A Novel Therapy for Metastatic Breast Cancer in Patients With a BRCA1/2 Mutation.

Caulfield SE, Davis CC, Byers KF.

J Adv Pract Oncol. 2019 Mar;10(2):167-174. Epub 2019 Mar 1. Review.

9.

Measuring the turbulence profile in the lower atmospheric boundary layer.

van Iersel M, Paulson DA, Wu C, Ferlic NA, Rzasa JR, Davis CC, Walker M, Bowden M, Spychalsky J, Titus F.

Appl Opt. 2019 Sep 1;58(25):6934-6941. doi: 10.1364/AO.58.006934.

PMID:
31503665
10.

Nausea and Vomiting: Managing Side Effects From PARP Inhibitors.

Davis CC, Caulfield S.

Oncology (Williston Park). 2019 Feb 15;33(2):58-61. No abstract available.

11.

Plastomes resolve generic limits within tribe Clusieae (Clusiaceae) and reveal the new genus Arawakia.

Marinho LC, Cai L, Duan X, Ruhfel BR, Fiaschi P, Amorim AM, van den Berg C, Davis CC.

Mol Phylogenet Evol. 2019 May;134:142-151. doi: 10.1016/j.ympev.2019.02.005. Epub 2019 Feb 8.

PMID:
30743062
12.

Author Correction: A statistical estimator for determining the limits of contemporary and historic phenology.

Pearse WD, Davis CC, Inouye DW, Primack RB, Davies TJ.

Nat Ecol Evol. 2019 Mar;3(3):499. doi: 10.1038/s41559-019-0825-2.

PMID:
30737495
13.

Herbarium specimens reveal substantial and unexpected variation in phenological sensitivity across the eastern United States.

Park DS, Breckheimer I, Williams AC, Law E, Ellison AM, Davis CC.

Philos Trans R Soc Lond B Biol Sci. 2018 Nov 19;374(1763). pii: 20170394. doi: 10.1098/rstb.2017.0394.

14.

Biological collections for understanding biodiversity in the Anthropocene.

Meineke EK, Davies TJ, Daru BH, Davis CC.

Philos Trans R Soc Lond B Biol Sci. 2018 Nov 19;374(1763). pii: 20170386. doi: 10.1098/rstb.2017.0386.

15.

Widespread ancient whole-genome duplications in Malpighiales coincide with Eocene global climatic upheaval.

Cai L, Xi Z, Amorim AM, Sugumaran M, Rest JS, Liu L, Davis CC.

New Phytol. 2019 Jan;221(1):565-576. doi: 10.1111/nph.15357. Epub 2018 Jul 21.

16.

Organellar genomics: a useful tool to study evolutionary relationships and molecular evolution in Gracilariaceae (Rhodophyta).

Iha C, Grassa CJ, Lyra GM, Davis CC, Verbruggen H, Oliveira MC.

J Phycol. 2018 Dec;54(6):775-787. doi: 10.1111/jpy.12765. Epub 2018 Sep 12.

PMID:
29989670
17.

Reading between the vines: Hosts as islands for extreme holoparasitic plants.

Barkman TJ, Klooster MR, Gaddis KD, Franzone B, Calhoun S, Manickam S, Vessabutr S, Sasirat S, Davis CC.

Am J Bot. 2017 Sep;104(9):1382-1389. doi: 10.3732/ajb.1700117.

18.
19.

Digitization protocol for scoring reproductive phenology from herbarium specimens of seed plants.

Yost JM, Sweeney PW, Gilbert E, Nelson G, Guralnick R, Gallinat AS, Ellwood ER, Rossington N, Willis CG, Blum SD, Walls RL, Haston EM, Denslow MW, Zohner CM, Morris AB, Stucky BJ, Carter JR, Baxter DG, Bolmgren K, Denny EG, Dean E, Pearson KD, Davis CC, Mishler BD, Soltis PS, Mazer SJ.

Appl Plant Sci. 2018 Feb 28;6(2):e1022. doi: 10.1002/aps3.1022. eCollection 2018 Feb.

20.

Phase and amplitude beam shaping with two deformable mirrors implementing input plane and Fourier plane phase modifications.

Wu C, Ko J, Rzasa JR, Paulson DA, Davis CC.

Appl Opt. 2018 Mar 20;57(9):2337-2345. doi: 10.1364/AO.57.002337.

PMID:
29604033
21.

Using turbulence scintillation to assist object ranging from a single camera viewpoint.

Wu C, Ko J, Coffaro J, Paulson DA, Rzasa JR, Andrews LC, Phillips RL, Crabbs R, Davis CC.

Appl Opt. 2018 Mar 20;57(9):2177-2187. doi: 10.1364/AO.57.002177.

PMID:
29604011
22.

Multi-aperture laser transmissometer system for long-path aerosol extinction rate measurement.

Wu C, Rzasa JR, Ko J, Paulson DA, Coffaro J, Spychalsky J, Crabbs RF, Davis CC.

Appl Opt. 2018 Jan 20;57(3):551-559. doi: 10.1364/AO.57.000551.

PMID:
29400780
23.

A statistical estimator for determining the limits of contemporary and historic phenology.

Pearse WD, Davis CC, Inouye DW, Primack RB, Davies TJ.

Nat Ecol Evol. 2017 Dec;1(12):1876-1882. doi: 10.1038/s41559-017-0350-0. Epub 2017 Nov 6. Erratum in: Nat Ecol Evol. 2019 Mar;3(3):499.

PMID:
29109468
24.

Widespread sampling biases in herbaria revealed from large-scale digitization.

Daru BH, Park DS, Primack RB, Willis CG, Barrington DS, Whitfeld TJS, Seidler TG, Sweeney PW, Foster DR, Ellison AM, Davis CC.

New Phytol. 2018 Jan;217(2):939-955. doi: 10.1111/nph.14855. Epub 2017 Oct 30.

25.

High-power lasers for directed-energy applications: reply.

Sprangle P, Hafizi B, Ting A, Fischer RP, Davis CC, Nelson W.

Appl Opt. 2017 Jun 1;56(16):4825-4826. doi: 10.1364/AO.56.004825.

PMID:
29047619
26.

Role of Calcium in the Coagulation of NOM with Ferric Chloride.

Davis CC, Edwards M.

Environ Sci Technol. 2017 Oct 17;51(20):11652-11659. doi: 10.1021/acs.est.7b02038. Epub 2017 Oct 4.

PMID:
28937218
27.

Repeated evolution of vertebrate pollination syndromes in a recently diverged Andean plant clade.

Lagomarsino LP, Forrestel EJ, Muchhala N, Davis CC.

Evolution. 2017 Aug;71(8):1970-1985. doi: 10.1111/evo.13297. Epub 2017 Jul 12.

PMID:
28640437
28.

Old Plants, New Tricks: Phenological Research Using Herbarium Specimens.

Willis CG, Ellwood ER, Primack RB, Davis CC, Pearson KD, Gallinat AS, Yost JM, Nelson G, Mazer SJ, Rossington NL, Sparks TH, Soltis PS.

Trends Ecol Evol. 2017 Jul;32(7):531-546. doi: 10.1016/j.tree.2017.03.015. Epub 2017 Apr 29. Review.

PMID:
28465044
29.

Comparison of the plenoptic sensor and the Shack-Hartmann sensor.

Ko J, Davis CC.

Appl Opt. 2017 May 1;56(13):3689-3698. doi: 10.1364/AO.56.003689.

PMID:
28463253
30.

CrowdCurio: an online crowdsourcing platform to facilitate climate change studies using herbarium specimens.

Willis CG, Law E, Williams AC, Franzone BF, Bernardos R, Bruno L, Hopkins C, Schorn C, Weber E, Park DS, Davis CC.

New Phytol. 2017 Jul;215(1):479-488. doi: 10.1111/nph.14535. Epub 2017 Apr 10.

31.

Plenoptic mapping for imaging and retrieval of the complex field amplitude of a laser beam.

Wu C, Ko J, Davis CC.

Opt Express. 2016 Dec 26;24(26):29852-29871. doi: 10.1364/OE.24.029852.

PMID:
28059371
32.
33.

Atmospheric propagation and combining of high-power lasers: reply.

Nelson W, Sprangle P, Davis CC.

Appl Opt. 2016 Oct 10;55(29):8338-8339. doi: 10.1364/AO.55.008338.

PMID:
27828083
34.

Phylogeny of Elatinaceae and the Tropical Gondwanan Origin of the Centroplacaceae(Malpighiaceae, Elatinaceae) Clade.

Cai L, Xi Z, Peterson K, Rushworth C, Beaulieu J, Davis CC.

PLoS One. 2016 Sep 29;11(9):e0161881. doi: 10.1371/journal.pone.0161881. eCollection 2016.

35.

Delimitating cryptic species in the Gracilaria domingensis complex (Gracilariaceae, Rhodophyta) using molecular and morphological data.

Lyra GM, Gurgel CF, Costa ED, de Jesus PB, Oliveira MC, Oliveira EC, Davis CC, Nunes JM.

J Phycol. 2016 Dec;52(6):997-1017. doi: 10.1111/jpy.12456. Epub 2016 Sep 15.

PMID:
27485203
36.

Using a plenoptic sensor to reconstruct vortex phase structures.

Wu C, Ko J, Davis CC.

Opt Lett. 2016 Jul 15;41(14):3169-72. doi: 10.1364/OL.41.003169.

PMID:
27420487
37.

Imaging through strong turbulence with a light field approach.

Wu C, Ko J, Davis CC.

Opt Express. 2016 May 30;24(11):11975-86. doi: 10.1364/OE.24.011975.

PMID:
27410119
38.

Dispersal largely explains the Gondwanan distribution of the ancient tropical clusioid plant clade.

Ruhfel BR, Bove CP, Philbrick CT, Davis CC.

Am J Bot. 2016 Jun;103(6):1117-28. doi: 10.3732/ajb.1500537. Epub 2016 Jun 22.

39.

Unraveling the biogeographical history of Chrysobalanaceae from plastid genomes.

Bardon L, Sothers C, Prance GT, Malé PJ, Xi Z, Davis CC, Murienne J, García-Villacorta R, Coissac E, Lavergne S, Chave J.

Am J Bot. 2016 Jun;103(6):1089-102. doi: 10.3732/ajb.1500463. Epub 2016 Jun 21.

40.

Clinical Utility of Routine Cardiac Monitoring in Breast Cancer Patients Receiving Trastuzumab.

Davis CC, Zelnak A, Eley JW, Goldstein DA, Switchenko JM, McKibbin T.

Ann Pharmacother. 2016 Sep;50(9):712-7. doi: 10.1177/1060028016654160. Epub 2016 Jun 15.

41.

Omnidirectional beacon-localization using a catadioptric system.

Shen TC, Drost RJ, Sadler BM, Rzasa JR, Davis CC.

Opt Express. 2016 Apr 4;24(7):6931-44. doi: 10.1364/OE.24.006931.

PMID:
27136988
43.

The abiotic and biotic drivers of rapid diversification in Andean bellflowers (Campanulaceae).

Lagomarsino LP, Condamine FL, Antonelli A, Mulch A, Davis CC.

New Phytol. 2016 Jun;210(4):1430-42. doi: 10.1111/nph.13920. Epub 2016 Mar 14.

44.

Phylogeny of Gracilariaceae (Rhodophyta): evidence from plastid and mitochondrial nucleotide sequences.

Lyra Gde M, Costa Eda S, de Jesus PB, de Matos JC, Caires TA, Oliveira MC, Oliveira EC, Xi Z, Nunes JM, Davis CC.

J Phycol. 2015 Apr;51(2):356-66. doi: 10.1111/jpy.12281. Epub 2015 Mar 12.

PMID:
26986530
45.

Using an incoherent target return to adaptively focus through atmospheric turbulence.

Nelson W, Palastro JP, Wu C, Davis CC.

Opt Lett. 2016 Mar 15;41(6):1301-4. doi: 10.1364/OL.41.001301.

PMID:
26977694
46.

Atmospheric propagation and combining of high-power lasers.

Nelson W, Sprangle P, Davis CC.

Appl Opt. 2016 Mar 1;55(7):1757-64. doi: 10.1364/AO.55.001757.

PMID:
26974640
47.

COPD exacerbations associated with the modified Medical Research Council scale and COPD assessment test among Humana Medicare members.

Pasquale MK, Xu Y, Baker CL, Zou KH, Teeter JG, Renda AM, Davis CC, Lee TC, Bobula J.

Int J Chron Obstruct Pulmon Dis. 2016 Jan 14;11:111-21. doi: 10.2147/COPD.S94323. eCollection 2016.

48.

The Impact of Missing Data on Species Tree Estimation.

Xi Z, Liu L, Davis CC.

Mol Biol Evol. 2016 Mar;33(3):838-60. doi: 10.1093/molbev/msv266. Epub 2015 Nov 20.

PMID:
26589995
49.

Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics.

Edwards SV, Xi Z, Janke A, Faircloth BC, McCormack JE, Glenn TC, Zhong B, Wu S, Lemmon EM, Lemmon AR, Leaché AD, Liu L, Davis CC.

Mol Phylogenet Evol. 2016 Jan;94(Pt A):447-62. doi: 10.1016/j.ympev.2015.10.027. Epub 2015 Oct 27. Review.

50.

Herbarium records are reliable sources of phenological change driven by climate and provide novel insights into species' phenological cueing mechanisms.

Davis CC, Willis CG, Connolly B, Kelly C, Ellison AM.

Am J Bot. 2015 Oct;102(10):1599-609. doi: 10.3732/ajb.1500237. Epub 2015 Oct 8.

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