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Items: 1 to 50 of 131

1.

Modelling reaction time distribution of fast decision tasks in schizophrenia: Evidence for novel candidate endophenotypes.

Fish S, Toumaian M, Pappa E, Davies TJ, Tanti R, Saville CWN, Theleritis C, Economou M, Klein C, Smyrnis N.

Psychiatry Res. 2018 Aug 18;269:212-220. doi: 10.1016/j.psychres.2018.08.067. [Epub ahead of print]

PMID:
30153599
2.

Factors influencing bacterial microbiome composition in a wild non-human primate community in Taï National Park, Côte d'Ivoire.

Gogarten JF, Davies TJ, Benjamino J, Gogarten JP, Graf J, Mielke A, Mundry R, Nelson MC, Wittig RM, Leendertz FH, Calvignac-Spencer S.

ISME J. 2018 Oct;12(10):2559-2574. doi: 10.1038/s41396-018-0166-1. Epub 2018 Jun 28.

PMID:
29955140
3.

Validating a 14-Drug Microtiter Plate Containing Bedaquiline and Delamanid for Large-Scale Research Susceptibility Testing of Mycobacterium tuberculosis.

Rancoita PMV, Cugnata F, Gibertoni Cruz AL, Borroni E, Hoosdally SJ, Walker TM, Grazian C, Davies TJ, Peto TEA, Crook DW, Fowler PW, Cirillo DM; CRyPTIC Consortiumfor the CRyPTIC Consortiumfor the CRyPTIC Consortium .

Antimicrob Agents Chemother. 2018 Aug 27;62(9). pii: e00344-18. doi: 10.1128/AAC.00344-18. Print 2018 Sep.

4.

On the relationship between phylogenetic diversity and trait diversity.

Tucker CM, Davies TJ, Cadotte MW, Pearse WD.

Ecology. 2018 Jun;99(6):1473-1479. doi: 10.1002/ecy.2349. Epub 2018 May 21.

PMID:
29782644
5.

Evolutionary Rates Standardized for Evolutionary Space: Perspectives on Trait Evolution.

Rolshausen G, Davies TJ, Hendry AP.

Trends Ecol Evol. 2018 Jun;33(6):379-389. doi: 10.1016/j.tree.2018.04.001. Epub 2018 Apr 30. Review.

PMID:
29724487
6.

The role of DNA methylation in ageing and cancer.

Morgan AE, Davies TJ, Mc Auley MT.

Proc Nutr Soc. 2018 Apr 30:1-11. doi: 10.1017/S0029665118000150. [Epub ahead of print]

PMID:
29708096
7.

Characterizing the phylogenetic specialism-generalism spectrum of mammal parasites.

Park AW, Farrell MJ, Schmidt JP, Huang S, Dallas TA, Pappalardo P, Drake JM, Stephens PR, Poulin R, Nunn CL, Davies TJ.

Proc Biol Sci. 2018 Mar 14;285(1874). pii: 20172613. doi: 10.1098/rspb.2017.2613.

PMID:
29514973
8.

Global macroevolution and macroecology of passerine song.

Pearse WD, Morales-Castilla I, James LS, Farrell M, Boivin F, Davies TJ.

Evolution. 2018 Apr;72(4):944-960. doi: 10.1111/evo.13450. Epub 2018 Mar 25.

PMID:
29441527
9.

Directed Differentiation of Human Induced Pluripotent Stem Cells into Dendritic Cells Displaying Tolerogenic Properties and Resembling the CD141+ Subset.

Sachamitr P, Leishman AJ, Davies TJ, Fairchild PJ.

Front Immunol. 2018 Jan 8;8:1935. doi: 10.3389/fimmu.2017.01935. eCollection 2017.

10.

Tongues on the EDGE: language preservation priorities based on threat and lexical distinctiveness.

Perrault N, Farrell MJ, Davies TJ.

R Soc Open Sci. 2017 Dec 13;4(12):171218. doi: 10.1098/rsos.171218. eCollection 2017 Dec.

11.

Towards an eco-phylogenetic framework for infectious disease ecology.

Fountain-Jones NM, Pearse WD, Escobar LE, Alba-Casals A, Carver S, Davies TJ, Kraberger S, Papeş M, Vandegrift K, Worsley-Tonks K, Craft ME.

Biol Rev Camb Philos Soc. 2018 May;93(2):950-970. doi: 10.1111/brv.12380. Epub 2017 Nov 8.

PMID:
29114986
12.

A statistical estimator for determining the limits of contemporary and historic phenology.

Pearse WD, Davis CC, Inouye DW, Primack RB, Davies TJ.

Nat Ecol Evol. 2017 Dec;1(12):1876-1882. doi: 10.1038/s41559-017-0350-0. Epub 2017 Nov 6.

PMID:
29109468
13.

Understanding the Processes Underpinning Patterns of Phylogenetic Regionalization.

Daru BH, Elliott TL, Park DS, Davies TJ.

Trends Ecol Evol. 2017 Nov;32(11):845-860. doi: 10.1016/j.tree.2017.08.013. Epub 2017 Sep 14. Review.

PMID:
28919204
14.

Admixture on the northern front: population genomics of range expansion in the white-footed mouse (Peromyscus leucopus) and secondary contact with the deer mouse (Peromyscus maniculatus).

Garcia-Elfring A, Barrett RDH, Combs M, Davies TJ, Munshi-South J, Millien V.

Heredity (Edinb). 2017 Dec;119(6):447-458. doi: 10.1038/hdy.2017.57. Epub 2017 Sep 13.

PMID:
28902189
15.

Ten years of barcoding at the African Centre for DNA Barcoding.

Bezeng BS, Davies TJ, Daru BH, Kabongo RM, Maurin O, Yessoufou K, van der Bank H, van der Bank M.

Genome. 2017 Jul;60(7):629-638. doi: 10.1139/gen-2016-0198. Epub 2017 Mar 24. Review.

PMID:
28340301
16.

Habitat filtering not dispersal limitation shapes oceanic island floras: species assembly of the Galápagos archipelago.

Carvajal-Endara S, Hendry AP, Emery NC, Davies TJ.

Ecol Lett. 2017 Apr;20(4):495-504. doi: 10.1111/ele.12753. Epub 2017 Mar 10.

PMID:
28294532
17.

Correction: A Complete Fossil-Calibrated Phylogeny of Seed Plant Families as a Tool for Comparative Analyses: Testing the 'Time for Speciation' Hypothesis.

Harris LW, Davies TJ.

PLoS One. 2017 Feb 21;12(2):e0172816. doi: 10.1371/journal.pone.0172816. eCollection 2017.

18.

Beneath the sword of Damocles: regenerative medicine and the shadow of immunogenicity.

Fairchild PJ, Horton C, Lahiri P, Shanmugarajah K, Davies TJ.

Regen Med. 2016 Dec;11(8):817-829. Epub 2016 Dec 1. Review.

19.

Deconstructing the relationships between phylogenetic diversity and ecology: a case study on ecosystem functioning.

Davies TJ, Urban MC, Rayfield B, Cadotte MW, Peres-Neto PR.

Ecology. 2016 Sep;97(9):2212-2222. doi: 10.1002/ecy.1507.

PMID:
27859062
20.

Influence of tree shape and evolutionary time-scale on phylogenetic diversity metrics.

Mazel F, Davies TJ, Gallien L, Renaud J, Groussin M, Münkemüller T, Thuiller W.

Ecography (Cop.). 2016 Oct;39(10):913-920. Epub 2015 Dec 9.

21.

A Complete Fossil-Calibrated Phylogeny of Seed Plant Families as a Tool for Comparative Analyses: Testing the 'Time for Speciation' Hypothesis.

Harris LW, Davies TJ.

PLoS One. 2016 Oct 5;11(10):e0162907. doi: 10.1371/journal.pone.0162907. eCollection 2016. Erratum in: PLoS One. 2017 Feb 21;12 (2):e0172816.

22.

Spiny plants, mammal browsers, and the origin of African savannas.

Charles-Dominique T, Davies TJ, Hempson GP, Bezeng BS, Daru BH, Kabongo RM, Maurin O, Muasya AM, van der Bank M, Bond WJ.

Proc Natl Acad Sci U S A. 2016 Sep 20;113(38):E5572-9. doi: 10.1073/pnas.1607493113. Epub 2016 Sep 6.

23.

Anodic stripping voltammetry with graphite felt electrodes for the trace analysis of silver.

Davies TJ.

Analyst. 2016 Aug 7;141(15):4742-8. doi: 10.1039/c6an00590j. Epub 2016 Jun 9.

PMID:
27276994
24.

Improving phylogenetic regression under complex evolutionary models.

Mazel F, Davies TJ, Georges D, Lavergne S, Thuiller W, Peres-NetoO PR.

Ecology. 2016 Feb;97(2):286-93.

25.

A guide to phylogenetic metrics for conservation, community ecology and macroecology.

Tucker CM, Cadotte MW, Carvalho SB, Davies TJ, Ferrier S, Fritz SA, Grenyer R, Helmus MR, Jin LS, Mooers AO, Pavoine S, Purschke O, Redding DW, Rosauer DF, Winter M, Mazel F.

Biol Rev Camb Philos Soc. 2017 May;92(2):698-715. doi: 10.1111/brv.12252. Epub 2016 Jan 20.

26.

Multiple routes underground? Frost alone cannot explain the evolution of underground trees.

Davies TJ, Daru BH, van der Bank M, Maurin O, Bond WJ.

New Phytol. 2016 Feb;209(3):910-2. doi: 10.1111/nph.13795. No abstract available.

27.

Response to Strona & Fattorini: are generalist parasites being lost from their hosts?

Farrell MJ, Stephens PR, Davies TJ.

J Anim Ecol. 2016 May;85(3):624-7. doi: 10.1111/1365-2656.12470. Epub 2016 Jan 11.

PMID:
26751600
28.

Predicting loss of evolutionary history: Where are we?

Veron S, Davies TJ, Cadotte MW, Clergeau P, Pavoine S.

Biol Rev Camb Philos Soc. 2017 Feb;92(1):271-291. doi: 10.1111/brv.12228. Epub 2015 Oct 14. Review.

PMID:
26467982
29.

The predator-prey power law: Biomass scaling across terrestrial and aquatic biomes.

Hatton IA, McCann KS, Fryxell JM, Davies TJ, Smerlak M, Sinclair AR, Loreau M.

Science. 2015 Sep 4;349(6252):aac6284. doi: 10.1126/science.aac6284. Epub 2015 Sep 3.

30.

Sickness behaviour associated with non-lethal infections in wild primates.

Ghai RR, Fugère V, Chapman CA, Goldberg TL, Davies TJ.

Proc Biol Sci. 2015 Sep 7;282(1814). doi: 10.1098/rspb.2015.1436.

31.

Dendritic cells and pluripotency: unlikely allies in the pursuit of immunotherapy.

Fairchild PJ, Leishman A, Sachamitr P, Telfer C, Hackett S, Davies TJ.

Regen Med. 2015;10(3):275-86. doi: 10.2217/rme.15.6. Review.

PMID:
25933237
32.

Elevated P3b latency variability in carriers of ZNF804A risk allele for psychosis.

Saville CW, Lancaster TM, Davies TJ, Toumaian M, Pappa E, Fish S, Feige B, Bender S, Mantripragada KK, Linden DE, Klein C.

Neuroimage. 2015 Aug 1;116:207-13. doi: 10.1016/j.neuroimage.2015.04.024. Epub 2015 Apr 17.

PMID:
25896933
33.

The importance of, and the benefits derived from, forward dental peripatetic clinics in Afghanistan.

Davies TJ, McCormick RJ.

Br Dent J. 2015 Mar 13;218(5):303-6. doi: 10.1038/sj.bdj.2015.143.

PMID:
25766173
34.

Ecosystem functions across trophic levels are linked to functional and phylogenetic diversity.

Thompson PL, Davies TJ, Gonzalez A.

PLoS One. 2015 Feb 18;10(2):e0117595. doi: 10.1371/journal.pone.0117595. eCollection 2015.

35.

The path to host extinction can lead to loss of generalist parasites.

Farrell MJ, Stephens PR, Berrang-Ford L, Gittleman JL, Davies TJ.

J Anim Ecol. 2015 Jul;84(4):978-84. doi: 10.1111/1365-2656.12342. Epub 2015 Mar 4.

PMID:
25640629
36.

Losing history: how extinctions prune features from the tree of life.

Davies TJ.

Philos Trans R Soc Lond B Biol Sci. 2015 Feb 19;370(1662):20140006. doi: 10.1098/rstb.2014.0006.

37.

A highly optimized protocol for reprogramming cancer cells to pluripotency using nonviral plasmid vectors.

Zhao H, Davies TJ, Ning J, Chang Y, Sachamitr P, Sattler S, Fairchild PJ, Huang FP.

Cell Reprogram. 2015 Feb;17(1):7-18. doi: 10.1089/cell.2014.0046. Epub 2014 Dec 30.

38.

Hidden population structure and cross-species transmission of whipworms (Trichuris sp.) in humans and non-human primates in Uganda.

Ghai RR, Simons ND, Chapman CA, Omeja PA, Davies TJ, Ting N, Goldberg TL.

PLoS Negl Trop Dis. 2014 Oct 23;8(10):e3256. doi: 10.1371/journal.pntd.0003256. eCollection 2014 Oct.

39.

Temporal ecology in the Anthropocene.

Wolkovich EM, Cook BI, McLauchlan KK, Davies TJ.

Ecol Lett. 2014 Nov;17(11):1365-79. doi: 10.1111/ele.12353. Epub 2014 Sep 8.

PMID:
25199649
40.

Savanna fire and the origins of the 'underground forests' of Africa.

Maurin O, Davies TJ, Burrows JE, Daru BH, Yessoufou K, Muasya AM, van der Bank M, Bond WJ.

New Phytol. 2014 Oct;204(1):201-14. doi: 10.1111/nph.12936. Epub 2014 Jul 17.

41.

The enigma of the rise of angiosperms: can we untie the knot?

Augusto L, Davies TJ, Delzon S, De Schrijver A.

Ecol Lett. 2014 Oct;17(10):1326-38. doi: 10.1111/ele.12323. Epub 2014 Jun 29. Review.

PMID:
24975818
42.

Macroecological and macroevolutionary patterns of leaf herbivory across vascular plants.

Turcotte MM, Davies TJ, Thomsen CJ, Johnson MT.

Proc Biol Sci. 2014 Jul 22;281(1787). pii: 20140555. doi: 10.1098/rspb.2014.0555.

43.

Neutral biogeography and the evolution of climatic niches.

Boucher FC, Thuiller W, Davies TJ, Lavergne S.

Am Nat. 2014 May;183(5):573-84. doi: 10.1086/675506. Epub 2014 Mar 19.

44.

Progress towards an interdisciplinary science of plant phenology: building predictions across space, time and species diversity.

Wolkovich EM, Cook BI, Davies TJ.

New Phytol. 2014 Mar;201(4):1156-62. Epub 2013 Nov 18. Review.

PMID:
24649487
45.

Associations of circulating calcium and 25-hydroxyvitamin D with glucose metabolism in pregnancy: a cross-sectional study in European and South Asian women.

Whitelaw DC, Scally AJ, Tuffnell DJ, Davies TJ, Fraser WD, Bhopal RS, Wright J, Lawlor DA.

J Clin Endocrinol Metab. 2014 Mar;99(3):938-46. doi: 10.1210/jc.2013-2896. Epub 2014 Jan 1.

PMID:
24423329
46.

Nodule worm infection in humans and wild primates in Uganda: cryptic species in a newly identified region of human transmission.

Ghai RR, Chapman CA, Omeja PA, Davies TJ, Goldberg TL.

PLoS Negl Trop Dis. 2014 Jan 9;8(1):e2641. doi: 10.1371/journal.pntd.0002641. eCollection 2014.

47.

Ecology in the age of DNA barcoding: the resource, the promise and the challenges ahead.

Joly S, Davies TJ, Archambault A, Bruneau A, Derry A, Kembel SW, Peres-Neto P, Vamosi J, Wheeler TA.

Mol Ecol Resour. 2014 Mar;14(2):221-32. doi: 10.1111/1755-0998.12173. Epub 2013 Oct 21.

PMID:
24118947
48.

A Global Trend towards the Loss of Evolutionarily Unique Species in Mangrove Ecosystems.

Daru BH, Yessoufou K, Mankga LT, Davies TJ.

PLoS One. 2013 Jun 21;8(6):e66686. doi: 10.1371/journal.pone.0066686. Print 2013.

49.

Temperature-dependent shifts in phenology contribute to the success of exotic species with climate change.

Wolkovich EM, Davies TJ, Schaefer H, Cleland EE, Cook BI, Travers SE, Willis CG, Davis CC.

Am J Bot. 2013 Jul;100(7):1407-21.

50.

Revisiting the impacts of non-random extinction on the tree-of-life.

Davies TJ, Yessoufou K.

Biol Lett. 2013 Jun 12;9(4):20130343. doi: 10.1098/rsbl.2013.0343. Print 2013 Aug 23.

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