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A Closer Look at the Genomic Variation of Geographically Diverse Mycobacterium abscessus Clones That Cause Human Infection and Disease.

Davidson RM.

Front Microbiol. 2018 Dec 5;9:2988. doi: 10.3389/fmicb.2018.02988. eCollection 2018. Review.


Mycobacterium talmoniae, a Potential Pulmonary Pathogen Isolated from Multiple Patients with Bronchiectasis in the United States, Including the First Case of Clinical Disease in a Patient with Cystic Fibrosis.

Vasireddy R, Vasireddy S, Brown-Elliott BA, Greninger AL, Davidson RM, Ard KL, Turenne CY, Wallace RJ Jr.

J Clin Microbiol. 2019 Jan 30;57(2). pii: e00906-18. doi: 10.1128/JCM.00906-18. Print 2019 Feb.


Advancing Translational Science for Pulmonary Nontuberculous Mycobacterial Infections. A Road Map for Research.

Daniel-Wayman S, Abate G, Barber DL, Bermudez LE, Coler RN, Cynamon MH, Daley CL, Davidson RM, Dick T, Floto RA, Henkle E, Holland SM, Jackson M, Lee RE, Nuermberger EL, Olivier KN, Ordway DJ, Prevots DR, Sacchettini JC, Salfinger M, Sassetti CM, Sizemore CF, Winthrop KL, Zelazny AM.

Am J Respir Crit Care Med. 2019 Apr 15;199(8):947-951. doi: 10.1164/rccm.201807-1273PP. No abstract available.


Microbiome Sequencing Methods for Studying Human Diseases.

Davidson RM, Epperson LE.

Methods Mol Biol. 2018;1706:77-90. doi: 10.1007/978-1-4939-7471-9_5. Review.


Nontuberculous mycobacteria in cystic fibrosis: Updates and the path forward.

Martiniano SL, Davidson RM, Nick JA.

Pediatr Pulmonol. 2017 Nov;52(S48):S29-S36. doi: 10.1002/ppul.23825. Epub 2017 Sep 7. Review.


Mycobacterium talmoniae sp. nov., a slowly growing mycobacterium isolated from human respiratory samples.

Davidson RM, DeGroote MA, Marola JL, Buss S, Jones V, McNeil MR, Freifeld AG, Elaine Epperson L, Hasan NA, Jackson M, Iwen PC, Salfinger M, Strong M.

Int J Syst Evol Microbiol. 2017 Aug;67(8):2640-2645. doi: 10.1099/ijsem.0.001998. Epub 2017 Aug 15.


Mycobacterium abscessus Displays Fitness for Fomite Transmission.

Malcolm KC, Caceres SM, Honda JR, Davidson RM, Epperson LE, Strong M, Chan ED, Nick JA.

Appl Environ Microbiol. 2017 Sep 15;83(19). pii: e00562-17. doi: 10.1128/AEM.00562-17. Print 2017 Oct 1.


Complete Genome Sequence of Mycobacterium avium subsp. hominissuis Strain H87 Isolated from an Indoor Water Sample.

Zhao X, Epperson LE, Hasan NA, Honda JR, Chan ED, Strong M, Walter ND, Davidson RM.

Genome Announc. 2017 Apr 20;5(16). pii: e00189-17. doi: 10.1128/genomeA.00189-17.


Microbiology: Bacterial transmission tactics.

Strong M, Davidson RM.

Nature. 2017 Mar 22;543(7646):495-496. doi: 10.1038/543495a. No abstract available.


Correction: Environmental Nontuberculous Mycobacteria in the Hawaiian Islands.

Honda JR, Hasan NA, Davidson RM, Williams MD, Epperson LE, Reynolds PR, Smith T, Iakhiaeva E, Bankowski MJ, Wallace RJ Jr, Chan ED, Falkinham JO 3rd, Strong M.

PLoS Negl Trop Dis. 2016 Dec 2;10(12):e0005200. doi: 10.1371/journal.pntd.0005200. eCollection 2016 Dec.


Complete Genome Sequence of Mycobacterium chimaera Strain AH16.

Hasan NA, Honda JR, Davidson RM, Epperson LE, Bankowski MJ, Chan ED, Strong M.

Genome Announc. 2016 Nov 23;4(6). pii: e01276-16. doi: 10.1128/genomeA.01276-16.


Environmental Nontuberculous Mycobacteria in the Hawaiian Islands.

Honda JR, Hasan NA, Davidson RM, Williams MD, Epperson LE, Reynolds PR, Smith T, Iakhiaeva E, Bankowski MJ, Wallace RJ Jr, Chan ED, Falkinham JO 3rd, Strong M.

PLoS Negl Trop Dis. 2016 Oct 25;10(10):e0005068. doi: 10.1371/journal.pntd.0005068. eCollection 2016 Oct. Erratum in: PLoS Negl Trop Dis. 2016 Dec 2;10 (12 ):e0005200.


Nocardia arthritidis as a cause of disseminated nocardiosis in a patient with chronic lymphocytic leukemia.

Roberts AL, Davidson RM, Freifeld AG, Iwen PC.

IDCases. 2016 Sep 28;6:68-71. eCollection 2016.


Longitudinal whole genome analysis of pre and post drug treatment Mycobacterium tuberculosis isolates reveals progressive steps to drug resistance.

Datta G, Nieto LM, Davidson RM, Mehaffy C, Pederson C, Dobos KM, Strong M.

Tuberculosis (Edinb). 2016 May;98:50-5. doi: 10.1016/ Epub 2016 Feb 26.


MycoBASE: expanding the functional annotation coverage of mycobacterial genomes.

Garcia BJ, Datta G, Davidson RM, Strong M.

BMC Genomics. 2015 Dec 24;16:1102. doi: 10.1186/s12864-015-2311-9.


Development of the My Medicines and Me (M3Q) side effect questionnaire for mental health patients: a qualitative study.

Ashoorian DM, Davidson RM, Rock DJ, Seubert LJ, Clifford RM.

Ther Adv Psychopharmacol. 2015 Oct;5(5):289-303. doi: 10.1177/2045125315598466.


Draft Genome Sequence of Mycobacterium chelonae Type Strain ATCC 35752.

Hasan NA, Davidson RM, de Moura VC, Garcia BJ, Reynolds PR, Epperson LE, Farias-Hesson E, DeGroote MA, Jackson M, Strong M.

Genome Announc. 2015 May 28;3(3). pii: e00536-15. doi: 10.1128/genomeA.00536-15.


A novel hypothesis for atherosclerosis as a cholesterol sulfate deficiency syndrome.

Seneff S, Davidson RM, Lauritzen A, Samsel A, Wainwright G.

Theor Biol Med Model. 2015 May 27;12:9. doi: 10.1186/s12976-015-0006-1.


Construction and validation of the My Medicines and Me Questionnaire for assessment of the self-reported side effects of psychotropic medication.

Ashoorian DM, Davidson RM, Rock DJ, Dragovic M, Clifford RM.

Int Clin Psychopharmacol. 2015 Jul;30(4):224-9. doi: 10.1097/YIC.0000000000000072.


Transcriptional Adaptation of Drug-tolerant Mycobacterium tuberculosis During Treatment of Human Tuberculosis.

Walter ND, Dolganov GM, Garcia BJ, Worodria W, Andama A, Musisi E, Ayakaka I, Van TT, Voskuil MI, de Jong BC, Davidson RM, Fingerlin TE, Kechris K, Palmer C, Nahid P, Daley CL, Geraci M, Huang L, Cattamanchi A, Strong M, Schoolnik GK, Davis JL.

J Infect Dis. 2015 Sep 15;212(6):990-8. doi: 10.1093/infdis/jiv149. Epub 2015 Mar 11.


Aluminum-induced entropy in biological systems: implications for neurological disease.

Shaw CA, Seneff S, Kette SD, Tomljenovic L, Oller JW Jr, Davidson RM.

J Toxicol. 2014;2014:491316. doi: 10.1155/2014/491316. Epub 2014 Oct 2. Review.


Genome sequencing of Mycobacterium abscessus isolates from patients in the united states and comparisons to globally diverse clinical strains.

Davidson RM, Hasan NA, Reynolds PR, Totten S, Garcia B, Levin A, Ramamoorthy P, Heifets L, Daley CL, Strong M.

J Clin Microbiol. 2014 Oct;52(10):3573-82. doi: 10.1128/JCM.01144-14. Epub 2014 Jul 23.


The transcriptional network of WRKY53 in cereals links oxidative responses to biotic and abiotic stress inputs.

Van Eck L, Davidson RM, Wu S, Zhao BY, Botha AM, Leach JE, Lapitan NL.

Funct Integr Genomics. 2014 Jun;14(2):351-62. doi: 10.1007/s10142-014-0374-3. Epub 2014 Apr 29.


HspX vaccination and role in virulence in the guinea pig model of tuberculosis.

Wieczorek AE, Troudt JL, Knabenbauer P, Taylor J, Pavlicek RL, Karls R, Hess A, Davidson RM, Strong M, Bielefeldt-Ohmann H, Izzo AA, Dobos KM.

Pathog Dis. 2014 Aug;71(3):315-25. doi: 10.1111/2049-632X.12147. Epub 2014 Feb 24.


High-level relatedness among Mycobacterium abscessus subsp. massiliense strains from widely separated outbreaks.

Tettelin H, Davidson RM, Agrawal S, Aitken ML, Shallom S, Hasan NA, Strong M, de Moura VC, De Groote MA, Duarte RS, Hine E, Parankush S, Su Q, Daugherty SC, Fraser CM, Brown-Elliott BA, Wallace RJ Jr, Holland SM, Sampaio EP, Olivier KN, Jackson M, Zelazny AM.

Emerg Infect Dis. 2014 Mar;20(3):364-71. doi: 10.3201/eid2003.131106.


Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data.

Kawahara Y, de la Bastide M, Hamilton JP, Kanamori H, McCombie WR, Ouyang S, Schwartz DC, Tanaka T, Wu J, Zhou S, Childs KL, Davidson RM, Lin H, Quesada-Ocampo L, Vaillancourt B, Sakai H, Lee SS, Kim J, Numa H, Itoh T, Buell CR, Matsumoto T.

Rice (N Y). 2013 Feb 6;6(1):4. doi: 10.1186/1939-8433-6-4.


Phylogenomics of Brazilian epidemic isolates of Mycobacterium abscessus subsp. bolletii reveals relationships of global outbreak strains.

Davidson RM, Hasan NA, de Moura VC, Duarte RS, Jackson M, Strong M.

Infect Genet Evol. 2013 Dec;20:292-7. doi: 10.1016/j.meegid.2013.09.012. Epub 2013 Sep 18.


Genome Sequence of an Epidemic Isolate of Mycobacterium abscessus subsp. bolletii from Rio de Janeiro, Brazil.

Davidson RM, Reynolds PR, Farias-Hesson E, Duarte RS, Jackson M, Strong M.

Genome Announc. 2013 Aug 15;1(4). pii: e00617-13. doi: 10.1128/genomeA.00617-13.


Comparative transcriptomics of three Poaceae species reveals patterns of gene expression evolution.

Davidson RM, Gowda M, Moghe G, Lin H, Vaillancourt B, Shiu SH, Jiang N, Robin Buell C.

Plant J. 2012 Aug;71(3):492-502. doi: 10.1111/j.1365-313X.2012.05005.x. Epub 2012 Jun 5.


Gene coexpression network analysis as a source of functional annotation for rice genes.

Childs KL, Davidson RM, Buell CR.

PLoS One. 2011;6(7):e22196. doi: 10.1371/journal.pone.0022196. Epub 2011 Jul 22.


Dietary garlic and hip osteoarthritis: evidence of a protective effect and putative mechanism of action.

Williams FM, Skinner J, Spector TD, Cassidy A, Clark IM, Davidson RM, MacGregor AJ.

BMC Musculoskelet Disord. 2010 Dec 8;11:280. doi: 10.1186/1471-2474-11-280.


Genomewide SNP variation reveals relationships among landraces and modern varieties of rice.

McNally KL, Childs KL, Bohnert R, Davidson RM, Zhao K, Ulat VJ, Zeller G, Clark RM, Hoen DR, Bureau TE, Stokowski R, Ballinger DG, Frazer KA, Cox DR, Padhukasahasram B, Bustamante CD, Weigel D, Mackill DJ, Bruskiewich RM, R├Ątsch G, Buell CR, Leung H, Leach JE.

Proc Natl Acad Sci U S A. 2009 Jul 28;106(30):12273-8. doi: 10.1073/pnas.0900992106. Epub 2009 Jul 13.


The potential use of gingival crevicular blood for measuring glucose to screen for diabetes: an examination based on characteristics of the blood collection site.

Strauss SM, Wheeler AJ, Russell SL, Brodsky A, Davidson RM, Gluzman R, Li L, Malo RG, Salis B, Schoor R, Tzvetkova K.

J Periodontol. 2009 Jun;80(6):907-14. doi: 10.1902/jop.2009.080542.


A germin-like protein gene family functions as a complex quantitative trait locus conferring broad-spectrum disease resistance in rice.

Manosalva PM, Davidson RM, Liu B, Zhu X, Hulbert SH, Leung H, Leach JE.

Plant Physiol. 2009 Jan;149(1):286-96. doi: 10.1104/pp.108.128348. Epub 2008 Nov 14.


Right atrial and ventricular masses of unknown origin.

Wertman BM, Goland S, Davidson RM, Siegel RJ.

J Am Soc Echocardiogr. 2008 Jun;21(6):776.e5-7. Epub 2007 Nov 1.


A cooperative network of trained sites for the conduct of a complex clinical trial: a new concept in multicenter clinical research.

Davidson RM, McNeer JF, Logan L, Higginbotham MB, Anderson J, Blackshear J, Chu A, Hettleman B, McGrew F, Meesse R, O'Connor C, Schneider R, Wagner GS; EXERDUCCS Investigators.

Am Heart J. 2006 Feb;151(2):451-6.


Control and eradication of animal diseases in New Zealand.

Davidson RM.

N Z Vet J. 2002;50(3 Suppl):6-12.


The effect of arm traction on the adequacy of cross-table lateral cervical spine radiographs.

Bowe CT, Burton JH, Chandler RC, Davidson RM.

J Trauma. 2003 Oct;55(4):800-1. No abstract available.


Football protective gear and cervical spine imaging.

Davidson RM, Burton JH, Snowise M, Owens WB.

Ann Emerg Med. 2001 Jul;38(1):26-30.


Calcium channel current in rat dental pulp cells.

Davidson RM, Guo L.

J Membr Biol. 2000 Nov 1;178(1):21-30.


A novel method to isolate odontoblasts from rat incisor.

Guo L, Berry JE, Somerman MJ, Davidson RM.

Calcif Tissue Int. 2000 Mar;66(3):212-6.


Extracellular Ca2+ increases cytosolic free Ca2+ in freshly isolated rat odontoblasts.

Guo L, Davidson RM.

J Bone Miner Res. 1999 Aug;14(8):1357-66.


Use of a resin-ionomer in the treatment of mechanical root perforation: report of a case.

Resillez-Urioste F, Sanandajt K, Davidson RM.

Quintessence Int. 1998 Feb;29(2):115-8.


Potassium and chloride channels in freshly isolated rat odontoblasts.

Guo L, Davidson RM.

J Dent Res. 1998 Feb;77(2):341-50.


Continuous mechanical loading alters properties of mechanosensitive channels in G292 osteoblastic cells.

Davidson RM, Lingenbrink PA, Norton LA.

Calcif Tissue Int. 1996 Dec;59(6):500-4.


Sidewise dispersion relations and the structure of the nucleon vertex.

Davidson RM, Poulis GI.

Phys Rev D Part Fields. 1996 Aug 1;54(3):2228-2241. No abstract available.


NaF potentiates a K(+)-selective ion channel in G292 osteoblastic cells.

Gofa A, Davidson RM.

J Membr Biol. 1996 Feb;149(3):211-9.


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