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Items: 1 to 50 of 90

1.

Shifting the limits in wheat research and breeding using a fully annotated reference genome.

International Wheat Genome Sequencing Consortium (IWGSC); IWGSC RefSeq principal investigators:, Appels R, Eversole K, Feuillet C, Keller B, Rogers J, Stein N; IWGSC whole-genome assembly principal investigators:, Pozniak CJ, Stein N, Choulet F, Distelfeld A, Eversole K, Poland J, Rogers J, Ronen G, Sharpe AG; Whole-genome sequencing and assembly:, Pozniak C, Ronen G, Stein N, Barad O, Baruch K, Choulet F, Keeble-Gagnère G, Mascher M, Sharpe AG, Ben-Zvi G, Josselin AA; Hi-C data-based scaffolding:, Stein N, Mascher M, Himmelbach A; Whole-genome assembly quality control and analyses:, Choulet F, Keeble-Gagnère G, Mascher M, Rogers J, Balfourier F, Gutierrez-Gonzalez J, Hayden M, Josselin AA, Koh C, Muehlbauer G, Pasam RK, Paux E, Pozniak CJ, Rigault P, Sharpe AG, Tibbits J, Tiwari V; Pseudomolecule assembly:, Choulet F, Keeble-Gagnère G, Mascher M, Josselin AA, Rogers J; RefSeq genome structure and gene analyses:, Spannagl M, Choulet F, Lang D, Gundlach H, Haberer G, Keeble-Gagnère G, Mayer KFX, Ormanbekova D, Paux E, Prade V, Šimková H, Wicker T; Automated annotation:, Choulet F, Spannagl M, Swarbreck D, Rimbert H, Felder M, Guilhot N, Gundlach H, Haberer G, Kaithakottil G, Keilwagen J, Lang D, Leroy P, Lux T, Mayer KFX, Twardziok S, Venturini L; Manual gene curation:, Appels R, Rimbert H, Choulet F, Juhász A, Keeble-Gagnère G; Subgenome comparative analyses:, Choulet F, Spannagl M, Lang D, Abrouk M, Haberer G, Keeble-Gagnère G, Mayer KFX, Wicker T; Transposable elements:, Choulet F, Wicker T, Gundlach H, Lang D, Spannagl M; Phylogenomic analyses:, Lang D, Spannagl M, Appels R, Fischer I; Transcriptome analyses and RNA-seq data:, Uauy C, Borrill P, Ramirez-Gonzalez RH, Appels R, Arnaud D, Chalabi S, Chalhoub B, Choulet F, Cory A, Datla R, Davey MW, Hayden M, Jacobs J, Lang D, Robinson SJ, Spannagl M, Steuernagel B, Tibbits J, Tiwari V, van Ex F, Wulff BBH; Whole-genome methylome:, Pozniak CJ, Robinson SJ, Sharpe AG, Cory A; Histone mark analyses:, Benhamed M, Paux E, Bendahmane A, Concia L, Latrasse D; BAC chromosome MTP IWGSC–Bayer Whole-Genome Profiling (WGP) tags:, Rogers J, Jacobs J, Alaux M, Appels R, Bartoš J, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, Letellier T, Olsen OA, Šimková H, Singh K, Valárik M, van der Vossen E, Vautrin S, Weining S; Chromosome LTC mapping and physical mapping quality control:, Korol A, Frenkel Z, Fahima T, Glikson V, Raats D, Rogers J; RH mapping:, Tiwari V, Gill B, Paux E, Poland J; Optical mapping:, Doležel J, Číhalíková J, Šimková H, Toegelová H, Vrána J; Recombination analyses:, Sourdille P, Darrier B; Gene family analyses:, Appels R, Spannagl M, Lang D, Fischer I, Ormanbekova D, Prade V; CBF gene family:, Barabaschi D, Cattivelli L; Dehydrin gene family:, Hernandez P, Galvez S, Budak H; NLR gene family:, Steuernagel B, Jones JDG, Witek K, Wulff BBH, Yu G; PPR gene family:, Small I, Melonek J, Zhou R; Prolamin gene family:, Juhász A, Belova T, Appels R, Olsen OA; WAK gene family:, Kanyuka K, King R; Stem solidness (SSt1) QTL team:, Nilsen K, Walkowiak S, Pozniak CJ, Cuthbert R, Datla R, Knox R, Wiebe K, Xiang D; Flowering locus C (FLC) gene team:, Rohde A, Golds T; Genome size analysis:, Doležel J, Čížková J, Tibbits J; MicroRNA and tRNA annotation:, Budak H, Akpinar BA, Biyiklioglu S; Genetic maps and mapping:, Muehlbauer G, Poland J, Gao L, Gutierrez-Gonzalez J, N'Daiye A; BAC libraries and chromosome sorting:, Doležel J, Šimková H, Číhalíková J, Kubaláková M, Šafář J, Vrána J; BAC pooling, BAC library repository, and access:, Berges H, Bellec A, Vautrin S; IWGSC sequence and data repository and access:, Alaux M, Alfama F, Adam-Blondon AF, Flores R, Guerche C, Letellier T, Loaec M, Quesneville H; Physical maps and BAC-based sequences:; 1A BAC sequencing and assembly:, Pozniak CJ, Sharpe AG, Walkowiak S, Budak H, Condie J, Ens J, Koh C, Maclachlan R, Tan Y, Wicker T; 1B BAC sequencing and assembly:, Choulet F, Paux E, Alberti A, Aury JM, Balfourier F, Barbe V, Couloux A, Cruaud C, Labadie K, Mangenot S, Wincker P; 1D, 4D, and 6D physical mapping:, Gill B, Kaur G, Luo M, Sehgal S; 2AL physical mapping:, Singh K, Chhuneja P, Gupta OP, Jindal S, Kaur P, Malik P, Sharma P, Yadav B; 2AS physical mapping:, Singh NK, Khurana J, Chaudhary C, Khurana P, Kumar V, Mahato A, Mathur S, Sevanthi A, Sharma N, Tomar RS; 2B, 2D, 4B, 5BL, and 5DL IWGSC–Bayer Whole-Genome Profiling (WGP) physical maps:, Rogers J, Jacobs J, Alaux M, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, van der Vossen E, Vautrin S; 3AL physical mapping:, Gill B, Kaur G, Luo M, Sehgal S; 3DS physical mapping and BAC sequencing and assembly:, Bartoš J, Holušová K, Plíhal O; 3DL BAC sequencing and assembly:, Clark MD, Heavens D, Kettleborough G, Wright J; 4A physical mapping, BAC sequencing, assembly, and annotation:, Valárik M, Abrouk M, Balcárková B, Holušová K, Hu Y, Luo M; 5BS BAC sequencing and assembly:, Salina E, Ravin N, Skryabin K, Beletsky A, Kadnikov V, Mardanov A, Nesterov M, Rakitin A, Sergeeva E; 6B BAC sequencing and assembly:, Handa H, Kanamori H, Katagiri S, Kobayashi F, Nasuda S, Tanaka T, Wu J; 7A physical mapping and BAC sequencing:, Appels R, Hayden M, Keeble-Gagnère G, Rigault P, Tibbits J; 7B physical mapping, BAC sequencing, and assembly:, Olsen OA, Belova T, Cattonaro F, Jiumeng M, Kugler K, Mayer KFX, Pfeifer M, Sandve S, Xun X, Zhan B; 7DS BAC sequencing and assembly:, Šimková H, Abrouk M, Batley J, Bayer PE, Edwards D, Hayashi S, Toegelová H, Tulpová Z, Visendi P; 7DL physical mapping and BAC sequencing:, Weining S, Cui L, Du X, Feng K, Nie X, Tong W, Wang L; Figures:, Borrill P, Gundlach H, Galvez S, Kaithakottil G, Lang D, Lux T, Mascher M, Ormanbekova D, Prade V, Ramirez-Gonzalez RH, Spannagl M, Stein N, Uauy C, Venturini L; Manuscript writing team:, Stein N, Appels R, Eversole K, Rogers J, Borrill P, Cattivelli L, Choulet F, Hernandez P, Kanyuka K, Lang D, Mascher M, Nilsen K, Paux E, Pozniak CJ, Ramirez-Gonzalez RH, Šimková H, Small I, Spannagl M, Swarbreck D, Uauy C.

Science. 2018 Aug 17;361(6403). pii: eaar7191. doi: 10.1126/science.aar7191. Epub 2018 Aug 16.

PMID:
30115783
2.

Members of the chloride intracellular ion channel protein family demonstrate glutaredoxin-like enzymatic activity.

Al Khamici H, Brown LJ, Hossain KR, Hudson AL, Sinclair-Burton AA, Ng JP, Daniel EL, Hare JE, Cornell BA, Curmi PM, Davey MW, Valenzuela SM.

PLoS One. 2015 Jan 12;10(1):e115699. doi: 10.1371/journal.pone.0115699. eCollection 2015.

3.

A systematic evaluation of protocols for a proteomics analysis of (lyophilized) fruit tissues.

Amoako-Andoh FO, Daniëls B, Keulemans W, Davey MW.

Electrophoresis. 2014 May;35(10):1395-1405.

PMID:
24921068
4.

"A draft Musa balbisiana genome sequence for molecular genetics in polyploid, inter- and intra-specific Musa hybrids".

Davey MW, Gudimella R, Harikrishna JA, Sin LW, Khalid N, Keulemans J.

BMC Genomics. 2013 Oct 5;14:683. doi: 10.1186/1471-2164-14-683.

5.

Regulation of fruit ascorbic acid concentrations during ripening in high and low vitamin C tomato cultivars.

Mellidou I, Keulemans J, Kanellis AK, Davey MW.

BMC Plant Biol. 2012 Dec 17;12:239. doi: 10.1186/1471-2229-12-239.

6.

Allelic variation in paralogs of GDP-L-galactose phosphorylase is a major determinant of vitamin C concentrations in apple fruit.

Mellidou I, Chagné D, Laing WA, Keulemans J, Davey MW.

Plant Physiol. 2012 Nov;160(3):1613-29. doi: 10.1104/pp.112.203786. Epub 2012 Sep 21.

7.

The role of several ABC transporter genes in ivermectin resistance in Caenorhabditis elegans.

Yan R, Urdaneta-Marquez L, Keller K, James CE, Davey MW, Prichard RK.

Vet Parasitol. 2012 Dec 21;190(3-4):519-29. doi: 10.1016/j.vetpar.2012.06.038. Epub 2012 Jul 4.

PMID:
22840641
8.

Genome-wide SNP detection, validation, and development of an 8K SNP array for apple.

Chagné D, Crowhurst RN, Troggio M, Davey MW, Gilmore B, Lawley C, Vanderzande S, Hellens RP, Kumar S, Cestaro A, Velasco R, Main D, Rees JD, Iezzoni A, Mockler T, Wilhelm L, Van de Weg E, Gardiner SE, Bassil N, Peace C.

PLoS One. 2012;7(2):e31745. doi: 10.1371/journal.pone.0031745. Epub 2012 Feb 21.

9.

The activity and hydrogen peroxide sensitivity of the peroxiredoxins from the parasitic nematode Haemonchus contortus.

Hudson AL, Sotirchos IM, Davey MW.

Mol Biochem Parasitol. 2011 Mar;176(1):17-24. doi: 10.1016/j.molbiopara.2010.11.006. Epub 2010 Nov 12.

PMID:
21075149
10.

Substrate specificity of the mitochondrial thioredoxin reductase of the parasitic nematode Haemonchus contortus.

Hudson AL, Sotirchos IM, Davey MW.

Parasitol Res. 2010 Jul;107(2):487-93. doi: 10.1007/s00436-010-1916-9. Epub 2010 May 22.

PMID:
20495929
11.

An update on P-glycoprotein and drug resistance in Schistosoma mansoni.

James CE, Hudson AL, Davey MW.

Trends Parasitol. 2009 Dec;25(12):538-9. doi: 10.1016/j.pt.2009.09.007. Epub 2009 Oct 21. No abstract available.

PMID:
19850522
12.

Heterologous oligonucleotide microarrays for transcriptomics in a non-model species; a proof-of-concept study of drought stress in Musa.

Davey MW, Graham NS, Vanholme B, Swennen R, May ST, Keulemans J.

BMC Genomics. 2009 Sep 16;10:436. doi: 10.1186/1471-2164-10-436.

13.

Drug resistance mechanisms in helminths: is it survival of the fittest?

James CE, Hudson AL, Davey MW.

Trends Parasitol. 2009 Jul;25(7):328-35. doi: 10.1016/j.pt.2009.04.004. Epub 2009 Jun 21.

PMID:
19541539
14.

Considerations to prevent the breakdown and loss of fruit carotenoids during extraction and analysis in Musa.

Davey MW, Mellidou I, Keulemans W.

J Chromatogr A. 2009 Jul 24;1216(30):5759-62. doi: 10.1016/j.chroma.2009.06.022. Epub 2009 Jun 10.

PMID:
19541318
15.

Application of visible and near-infrared reflectance spectroscopy (Vis/NIRS) to determine carotenoid contents in banana (Musa spp.) fruit pulp.

Davey MW, Saeys W, Hof E, Ramon H, Swennen RL, Keulemans J.

J Agric Food Chem. 2009 Mar 11;57(5):1742-51. doi: 10.1021/jf803137d.

PMID:
19219999
16.

A unique thioredoxin of the parasitic nematode Haemonchus contortus with glutaredoxin activity.

Sotirchos IM, Hudson AL, Ellis J, Davey MW.

Free Radic Biol Med. 2009 Mar 1;46(5):579-85. doi: 10.1016/j.freeradbiomed.2008.11.009. Epub 2008 Dec 3.

PMID:
19111609
17.

Ascorbic acid biosynthesis during tomato fruit development and ripening.

Mellidou I, Siomos A, Keulemans J, Kanellis A, Davey MW.

Commun Agric Appl Biol Sci. 2008;73(1):177-80. No abstract available.

PMID:
18831269
18.

Increased expression of ABC transport proteins is associated with ivermectin resistance in the model nematode Caenorhabditis elegans.

James CE, Davey MW.

Int J Parasitol. 2009 Jan;39(2):213-20. doi: 10.1016/j.ijpara.2008.06.009. Epub 2008 Jul 26.

PMID:
18708066
19.

Thioredoxins of a parasitic nematode: comparison of the 16- and 12-kDA thioredoxins from Haemonchus contortus.

Sotirchos IM, Hudson AL, Ellis J, Davey MW.

Free Radic Biol Med. 2008 Jun 15;44(12):2026-33. doi: 10.1016/j.freeradbiomed.2008.03.007. Epub 2008 Mar 20.

PMID:
18410747
20.

Expression pattern of key vitamin C biosynthesis genes in apple.

Rokni Zadeh H, Keulemans J, Davey MW.

Commun Agric Appl Biol Sci. 2007;72(1):269-73. No abstract available.

PMID:
18018901
21.

A rapid colorimetric assay for the quantitation of the viability of free-living larvae of nematodes in vitro.

James CE, Davey MW.

Parasitol Res. 2007 Sep;101(4):975-80. Epub 2007 May 11.

PMID:
17492469
22.

Sampling strategies and variability in fruit pulp micronutrient contents of west and central african bananas and plantains (Musa species).

Davey MW, Stals E, Ngoh-Newilah G, Tomekpe K, Lusty C, Markham R, Swennen R, Keulemans J.

J Agric Food Chem. 2007 Apr 4;55(7):2633-44. Epub 2007 Mar 9.

PMID:
17346062
23.

Methods for the efficient quantification of fruit provitamin A contents.

Davey MW, Keulemans J, Swennen R.

J Chromatogr A. 2006 Dec 15;1136(2):176-84. Epub 2006 Oct 17.

PMID:
17049540
24.

Genetic control of fruit vitamin C contents.

Davey MW, Kenis K, Keulemans J.

Plant Physiol. 2006 Sep;142(1):343-51. Epub 2006 Jul 14.

25.

A study of the L-ascorbate biosynthetic capacity of apple fruit.

Razavi F, Keulemans J, Davey MW.

Commun Agric Appl Biol Sci. 2005;70(2):213-6. No abstract available.

PMID:
16366311
26.

High-throughput determination of malondialdehyde in plant tissues.

Davey MW, Stals E, Panis B, Keulemans J, Swennen RL.

Anal Biochem. 2005 Dec 15;347(2):201-7. Epub 2005 Oct 21.

PMID:
16289006
27.

Oxaliplatin induces drug resistance more rapidly than cisplatin in H69 small cell lung cancer cells.

Stordal BK, Davey MW, Davey RA.

Cancer Chemother Pharmacol. 2006 Aug;58(2):256-65. Epub 2005 Nov 10.

PMID:
16283310
29.

Changes in gene expression associated with stable drug and radiation resistance in small cell lung cancer cells are similar to those caused by a single X-ray dose.

Henness S, Davey MW, Harvie RM, Banyer J, Wasinger V, Corthals G, Davey RA.

Radiat Res. 2004 May;161(5):495-503.

PMID:
15161375
30.

Cellular models of drug- and radiation-resistant small cell lung cancer.

Davey RA, Locke VL, Henness S, Harvie RM, Davey MW.

Anticancer Res. 2004 Mar-Apr;24(2A):465-71.

31.

Ascorbic acid concentration in Cv. conference pears during fruit development and postharvest storage.

Franck C, Baetens M, Lammertyn J, Verboven P, Davey MW, Nicolaï BM.

J Agric Food Chem. 2003 Jul 30;51(16):4757-63.

PMID:
14705909
32.

Modulation of drug and radiation resistance in small cell lung cancer cells by paclitaxel.

Locke VL, Davey RA, Davey MW.

Anticancer Drugs. 2003 Aug;14(7):523-31.

PMID:
12960736
33.

Rocket-powered high-performance liquid chromatographic analysis of plant ascorbate and glutathione.

Davey MW, Dekempeneer E, Keulemans J.

Anal Biochem. 2003 May 1;316(1):74-81.

PMID:
12694729
34.

The use of Tris-lipidation to modify drug cytotoxicity in multidrug resistant cells expressing P-glycoprotein or MRP1.

Davey RA, Davey MW, Cullen KV, Wells XE, Francis CL, Williams HM, Yang Q, Moghaddam MJ, Widmer F, Whittaker RG.

Br J Pharmacol. 2002 Dec;137(8):1280-6.

35.
36.

Gamma-glutamyl transpeptidase in transgenic tobacco plants. Cellular localization, processing, and biochemical properties.

Storozhenko S, Belles-Boix E, Babiychuk E, Hérouart D, Davey MW, Slooten L, Van Montagu M, Inzé D, Kushnir S.

Plant Physiol. 2002 Mar;128(3):1109-19.

37.

Partial purification and identification of GDP-mannose 3",5"-epimerase of Arabidopsis thaliana, a key enzyme of the plant vitamin C pathway.

Wolucka BA, Persiau G, Van Doorsselaere J, Davey MW, Demol H, Vandekerckhove J, Van Montagu M, Zabeau M, Boerjan W.

Proc Natl Acad Sci U S A. 2001 Dec 18;98(26):14843-8.

38.

Verapamil-stimulated glutathione transport by the multidrug resistance-associated protein (MRP1) in leukaemia cells.

Cullen KV, Davey RA, Davey MW.

Biochem Pharmacol. 2001 Aug 15;62(4):417-24.

PMID:
11448450
40.

A mutation of the mitochondrial ABC transporter Sta1 leads to dwarfism and chlorosis in the Arabidopsis mutant starik.

Kushnir S, Babiychuk E, Storozhenko S, Davey MW, Papenbrock J, De Rycke R, Engler G, Stephan UW, Lange H, Kispal G, Lill R, Van Montagu M.

Plant Cell. 2001 Jan;13(1):89-100.

41.

Drug resistance does not correlate with resistance to Fas-mediated apoptosis.

Cullen KV, Davey RA, Davey MW.

Leuk Res. 2001 Jan;25(1):69-75.

PMID:
11137563
42.

Ascorbate biosynthesis in Arabidopsis cell suspension culture.

Davey MW, Gilot C, Persiau G, Ostergaard J, Han Y, Bauw GC, Van Montagu MC.

Plant Physiol. 1999 Oct;121(2):535-43.

43.

Direct measurement of ascorbic acid biosynthesis in Arabidopsis cell suspension culture using capillary electrophoresis.

Davey MW, Persiau G, Bauw G, Van Montagu M.

J Chromatogr A. 1999 Aug 20;853(1-2):381-9.

PMID:
10486745
44.

Altered drug sensitivity in response to idarubicin treatment in K562 human leukaemia cells.

Locke VL, Davey RA, Davey MW.

Br J Haematol. 1999 Jul;106(1):86-91.

PMID:
10444167
45.

Urea improves efficiency of bisulphite-mediated sequencing of 5'-methylcytosine in genomic DNA.

Paulin R, Grigg GW, Davey MW, Piper AA.

Nucleic Acids Res. 1998 Nov 1;26(21):5009-10.

46.

The relationship between modulation of MDR and glutathione in MRP-overexpressing human leukemia cells.

Grech KV, Davey RA, Davey MW.

Biochem Pharmacol. 1998 Apr 15;55(8):1283-9.

PMID:
9719484
47.
48.

Analysing the redox status of plant tissues by FSCE.

Davey MW, Bauw G, Van Montagu M.

Biomed Chromatogr. 1998 May-Jun;12(3):101-3. No abstract available.

PMID:
9646898
49.
50.

Purification of the alkaloid lycorine and simultaneous analysis of ascorbic acid and lycorine by micellar electrokinetic capillary chromatography.

Davey MW, Persiau G, De Bruyn A, Van Damme J, Bauw G, Van Montagu M.

Anal Biochem. 1998 Mar 1;257(1):80-8.

PMID:
9512776

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