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Items: 17

1.

Development of a Supervised Learning Algorithm for Detection of Potential Disease Reemergence: A Proof of Concept.

Chitanvis M, Daughton AR, Altherr F, Parikh N, Fairchild G, Rosenberger W, Velappan N, Hollander A, Alipio-Lyon E, Vuyisich G, Aberle D, Deshpande A.

Health Secur. 2019 Jul/Aug;17(4):255-267. doi: 10.1089/hs.2019.0020.

PMID:
31433278
2.

Zika discourse in the Americas: A multilingual topic analysis of Twitter.

Pruss D, Fujinuma Y, Daughton AR, Paul MJ, Arnot B, Albers Szafir D, Boyd-Graber J.

PLoS One. 2019 May 23;14(5):e0216922. doi: 10.1371/journal.pone.0216922. eCollection 2019.

3.

Identifying Protective Health Behaviors on Twitter: Observational Study of Travel Advisories and Zika Virus.

Daughton AR, Paul MJ.

J Med Internet Res. 2019 May 13;21(5):e13090. doi: 10.2196/13090.

4.

Analytics for Investigation of Disease Outbreaks: Web-Based Analytics Facilitating Situational Awareness in Unfolding Disease Outbreaks.

Velappan N, Daughton AR, Fairchild G, Rosenberger WE, Generous N, Chitanvis ME, Altherr FM, Castro LA, Priedhorsky R, Abeyta EL, Naranjo LA, Hollander AD, Vuyisich G, Lillo AM, Cloyd EK, Vaidya AR, Deshpande A.

JMIR Public Health Surveill. 2019 Feb 25;5(1):e12032. doi: 10.2196/12032.

5.

Even a good influenza forecasting model can benefit from internet-based nowcasts, but those benefits are limited.

Osthus D, Daughton AR, Priedhorsky R.

PLoS Comput Biol. 2019 Feb 1;15(2):e1006599. doi: 10.1371/journal.pcbi.1006599. eCollection 2019 Feb.

6.

Epidemiological Data Challenges: Planning for a More Robust Future Through Data Standards.

Fairchild G, Tasseff B, Khalsa H, Generous N, Daughton AR, Velappan N, Priedhorsky R, Deshpande A.

Front Public Health. 2018 Nov 23;6:336. doi: 10.3389/fpubh.2018.00336. eCollection 2018.

7.

An extensible framework and database of infectious disease for biosurveillance.

Daughton AR, Priedhorsky R, Fairchild G, Generous N, Hengartner A, Abeyta E, Velappan N, Lillo A, Stark K, Deshpande A.

BMC Infect Dis. 2017 Aug 7;17(1):549. doi: 10.1186/s12879-017-2650-z.

8.

Measuring Global Disease with Wikipedia: Success, Failure, and a Research Agenda.

Priedhorsky R, Osthus D, Daughton AR, Moran KR, Generous N, Fairchild G, Deshpande A, Del Valle SY.

CSCW Conf Comput Support Coop Work. 2017 Feb-Mar;2017:1812-1834. doi: 10.1145/2998181.2998183.

9.

Corrigendum: An approach to and web-based tool for infectious disease outbreak intervention analysis.

Daughton AR, Generous N, Priedhorsky R, Deshpande A.

Sci Rep. 2017 Jun 19;7:46852. doi: 10.1038/srep46852.

10.

An approach to and web-based tool for infectious disease outbreak intervention analysis.

Daughton AR, Generous N, Priedhorsky R, Deshpande A.

Sci Rep. 2017 Apr 18;7:46076. doi: 10.1038/srep46076. Erratum in: Sci Rep. 2017 Jun 19;7:46852.

11.

Salivary microbiomes of indigenous Tsimane mothers and infants are distinct despite frequent premastication.

Han CS, Martin MA, Dichosa AEK, Daughton AR, Frietze S, Kaplan H, Gurven MD, Alcock J.

PeerJ. 2016 Nov 3;4:e2660. doi: 10.7717/peerj.2660. eCollection 2016.

12.

Novel Use of Flu Surveillance Data: Evaluating Potential of Sentinel Populations for Early Detection of Influenza Outbreaks.

Daughton AR, Velappan N, Abeyta E, Priedhorsky R, Deshpande A.

PLoS One. 2016 Jul 8;11(7):e0158330. doi: 10.1371/journal.pone.0158330. eCollection 2016.

13.

Surveillance for Emerging Diseases with Multiplexed Point-of-Care Diagnostics.

Deshpande A, McMahon B, Daughton AR, Abeyta EL, Hodge D, Anderson K, Pillai S.

Health Secur. 2016 May-Jun;14(3):111-21. doi: 10.1089/hs.2016.0005.

PMID:
27314652
14.

Draft Genome Sequence of Thauera sp. Strain SWB20, Isolated from a Singapore Wastewater Treatment Facility Using Gel Microdroplets.

Dichosa AE, Davenport KW, Li PE, Ahmed SA, Daligault H, Gleasner CD, Kunde Y, McMurry K, Lo CC, Reitenga KG, Daughton AR, Shen X, Frietze S, Wang D, Johnson SL, Drautz-Moses DI, Schuster S, Chain PS, Han C.

Genome Announc. 2015 Mar 19;3(2). pii: e00132-15. doi: 10.1128/genomeA.00132-15.

15.

Capturing and cultivating single bacterial cells in gel microdroplets to obtain near-complete genomes.

Dichosa AE, Daughton AR, Reitenga KG, Fitzsimons MS, Han CS.

Nat Protoc. 2014 Mar;9(3):608-21. doi: 10.1038/nprot.2014.034. Epub 2014 Feb 13.

PMID:
24525754
16.

Using phage display selected antibodies to dissect microbiomes for complete de novo genome sequencing of low abundance microbes.

Close DW, Ferrara F, Dichosa AE, Kumar S, Daughton AR, Daligault HE, Reitenga KG, Velappan N, Sanchez TC, Iyer S, Kiss C, Han CS, Bradbury AR.

BMC Microbiol. 2013 Nov 27;13:270. doi: 10.1186/1471-2180-13-270.

17.

Nearly finished genomes produced using gel microdroplet culturing reveal substantial intraspecies genomic diversity within the human microbiome.

Fitzsimons MS, Novotny M, Lo CC, Dichosa AE, Yee-Greenbaum JL, Snook JP, Gu W, Chertkov O, Davenport KW, McMurry K, Reitenga KG, Daughton AR, He J, Johnson SL, Gleasner CD, Wills PL, Parson-Quintana B, Chain PS, Detter JC, Lasken RS, Han CS.

Genome Res. 2013 May;23(5):878-88. doi: 10.1101/gr.142208.112. Epub 2013 Mar 14.

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