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Items: 28

1.

RNA-seq of serial kidney biopsies obtained during progression of chronic kidney disease from dogs with X-linked hereditary nephropathy.

Chu CP, Hokamp JA, Cianciolo RE, Dabney AR, Brinkmeyer-Langford C, Lees GE, Nabity MB.

Sci Rep. 2017 Dec 1;7(1):16776. doi: 10.1038/s41598-017-16603-y.

2.

Evaluation of Sterilized Artificial Diets for Mass Rearing the Lucilia sericata (Diptera: Calliphoridae).

Zheng L, Crippen TL, Dabney A, Gordy A, Tomberlin JK.

J Med Entomol. 2017 Sep 1;54(5):1122-1128. doi: 10.1093/jme/tjx091.

PMID:
28472319
3.

Transitioning to Patient-Centered Medical Homes: Associations With Appointment Availability.

Leroux TC, Côté MJ, Kum HC, Dabney A, Wells R.

Mil Med. 2017 Mar;182(3):e1741-e1746. doi: 10.7205/MILMED-D-16-00180.

PMID:
28290952
4.

Military Deployments and Mental Health Utilization Among Spouses of Active Duty Service Members.

Leroux TC, Kum HC, Dabney A, Wells R.

Mil Med. 2016 Oct;181(10):1269-1274.

PMID:
27753562
5.

Predicting "heart age" using electrocardiography.

Ball RL, Feiveson AH, Schlegel TT, Starc V, Dabney AR.

J Pers Med. 2014 Mar 7;4(1):65-78. doi: 10.3390/jpm4010065.

6.

Diet complexity and estrogen receptor β status affect the composition of the murine intestinal microbiota.

Menon R, Watson SE, Thomas LN, Allred CD, Dabney A, Azcarate-Peril MA, Sturino JM.

Appl Environ Microbiol. 2013 Sep;79(18):5763-73. doi: 10.1128/AEM.01182-13. Epub 2013 Jul 19.

7.

Normalization and missing value imputation for label-free LC-MS analysis.

Karpievitch YV, Dabney AR, Smith RD.

BMC Bioinformatics. 2012;13 Suppl 16:S5. doi: 10.1186/1471-2105-13-S16-S5. Epub 2012 Nov 5.

8.

DanteR: an extensible R-based tool for quantitative analysis of -omics data.

Taverner T, Karpievitch YV, Polpitiya AD, Brown JN, Dabney AR, Anderson GA, Smith RD.

Bioinformatics. 2012 Sep 15;28(18):2404-6. doi: 10.1093/bioinformatics/bts449. Epub 2012 Jul 19.

9.

Application of survival analysis methodology to the quantitative analysis of LC-MS proteomics data.

Tekwe CD, Carroll RJ, Dabney AR.

Bioinformatics. 2012 Aug 1;28(15):1998-2003. doi: 10.1093/bioinformatics/bts306. Epub 2012 May 24.

10.

A hybrid approach to protein differential expression in mass spectrometry-based proteomics.

Wang X, Anderson GA, Smith RD, Dabney AR.

Bioinformatics. 2012 Jun 15;28(12):1586-91. doi: 10.1093/bioinformatics/bts193. Epub 2012 Apr 19.

11.

A statistical method for assessing peptide identification confidence in accurate mass and time tag proteomics.

Stanley JR, Adkins JN, Slysz GW, Monroe ME, Purvine SO, Karpievitch YV, Anderson GA, Smith RD, Dabney AR.

Anal Chem. 2011 Aug 15;83(16):6135-40. doi: 10.1021/ac2009806. Epub 2011 Jul 15.

12.

Liquid Chromatography Mass Spectrometry-Based Proteomics: Biological and Technological Aspects.

Karpievitch YV, Polpitiya AD, Anderson GA, Smith RD, Dabney AR.

Ann Appl Stat. 2010;4(4):1797-1823.

13.

An introspective comparison of random forest-based classifiers for the analysis of cluster-correlated data by way of RF++.

Karpievitch YV, Hill EG, Leclerc AP, Dabney AR, Almeida JS.

PLoS One. 2009 Sep 18;4(9):e7087. doi: 10.1371/journal.pone.0007087.

14.

Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition.

Karpievitch YV, Taverner T, Adkins JN, Callister SJ, Anderson GA, Smith RD, Dabney AR.

Bioinformatics. 2009 Oct 1;25(19):2573-80. doi: 10.1093/bioinformatics/btp426. Epub 2009 Jul 14.

15.

A statistical framework for protein quantitation in bottom-up MS-based proteomics.

Karpievitch Y, Stanley J, Taverner T, Huang J, Adkins JN, Ansong C, Heffron F, Metz TO, Qian WJ, Yoon H, Smith RD, Dabney AR.

Bioinformatics. 2009 Aug 15;25(16):2028-34. doi: 10.1093/bioinformatics/btp362. Epub 2009 Jun 17.

16.

Elimination of systematic mass measurement errors in liquid chromatography-mass spectrometry based proteomics using regression models and a priori partial knowledge of the sample content.

Petyuk VA, Jaitly N, Moore RJ, Ding J, Metz TO, Tang K, Monroe ME, Tolmachev AV, Adkins JN, Belov ME, Dabney AR, Qian WJ, Camp DG 2nd, Smith RD.

Anal Chem. 2008 Feb 1;80(3):693-706. doi: 10.1021/ac701863d. Epub 2007 Dec 29.

17.

Optimality driven nearest centroid classification from genomic data.

Dabney AR, Storey JD.

PLoS One. 2007 Oct 3;2(10):e1002.

19.

A new approach to intensity-dependent normalization of two-channel microarrays.

Dabney AR, Storey JD.

Biostatistics. 2007 Jan;8(1):128-39. Epub 2006 Apr 24.

PMID:
16636140
20.

A reanalysis of a published Affymetrix GeneChip control dataset.

Dabney AR, Storey JD.

Genome Biol. 2006;7(3):401. Epub 2006 Mar 22.

21.

EDGE: extraction and analysis of differential gene expression.

Leek JT, Monsen E, Dabney AR, Storey JD.

Bioinformatics. 2006 Feb 15;22(4):507-8. Epub 2005 Dec 15. Erratum in: Bioinformatics. 2006 Jun 1;22(11):1412.

PMID:
16357033
22.

ClaNC: point-and-click software for classifying microarrays to nearest centroids.

Dabney AR.

Bioinformatics. 2006 Jan 1;22(1):122-3. Epub 2005 Nov 2.

PMID:
16269418
23.

Classification of microarrays to nearest centroids.

Dabney AR.

Bioinformatics. 2005 Nov 15;21(22):4148-54. Epub 2005 Sep 20.

PMID:
16174683
24.

Issues in the mapping of two diseases.

Dabney AR, Wakefield JC.

Stat Methods Med Res. 2005 Feb;14(1):83-112.

PMID:
15691001
25.

Short bowel syndrome after trauma.

Dabney A, Thompson J, DiBaise J, Sudan D, McBride C.

Am J Surg. 2004 Dec;188(6):792-5.

PMID:
15619501
26.

Internist judgments of chronic low back pain.

Chibnall JT, Dabney A, Tait RC.

Pain Med. 2000 Sep;1(3):231-7.

PMID:
15101889
27.

Rectal cancer following a kidney-pancreas transplant.

Dabney A, Longo WE, Garvin PJ.

Transplant Proc. 2002 Jun;34(4):1189-90. Review. No abstract available.

PMID:
12072311
28.

Enoxaparin-associated severe retroperitoneal bleeding and abdominal compartment syndrome: a report of two cases.

Dabney A, Bastani B.

Intensive Care Med. 2001 Dec;27(12):1954-7. Epub 2001 Nov 10.

PMID:
11797033

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