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Items: 40

1.

Thrust generation during steady swimming and acceleration from rest in anguilliform swimmers.

Du Clos KT, Dabiri JO, Costello JH, Colin SP, Morgan JR, Fogerson SM, Gemmell BJ.

J Exp Biol. 2019 Nov 18;222(Pt 22). pii: jeb212464. doi: 10.1242/jeb.212464.

PMID:
31740507
2.

Effect of swarm configuration on fluid transport during vertical collective motion.

Wilhelmus MM, Nawroth J, Rallabandi B, Dabiri JO.

Bioinspir Biomim. 2019 Nov 6;15(1):015002. doi: 10.1088/1748-3190/ab435b.

PMID:
31509804
3.

Hydrodynamics of Vortex Generation during Bell Contraction by the Hydromedusa Eutonina indicans (Romanes, 1876).

Costello JH, Colin SP, Gemmell BJ, Dabiri JO.

Biomimetics (Basel). 2019 Jul 5;4(3). pii: E44. doi: 10.3390/biomimetics4030044.

4.

Wind farm power optimization through wake steering.

Howland MF, Lele SK, Dabiri JO.

Proc Natl Acad Sci U S A. 2019 Jul 16;116(29):14495-14500. doi: 10.1073/pnas.1903680116. Epub 2019 Jul 1.

5.

Simultaneous coherent structure coloring facilitates interpretable clustering of scientific data by amplifying dissimilarity.

Husic BE, Schlueter-Kuck KL, Dabiri JO.

PLoS One. 2019 Mar 13;14(3):e0212442. doi: 10.1371/journal.pone.0212442. eCollection 2019.

6.

"Work on problems you most enjoy" - Munk's legacy.

Dabiri JO.

Nature. 2019 Mar;567(7747):175. doi: 10.1038/d41586-019-00827-1. No abstract available.

PMID:
30862925
7.

Vertically migrating swimmers generate aggregation-scale eddies in a stratified column.

Houghton IA, Koseff JR, Monismith SG, Dabiri JO.

Nature. 2018 Apr;556(7702):497-500. doi: 10.1038/s41586-018-0044-z. Epub 2018 Apr 18.

PMID:
29670284
8.

A pressure-based force and torque prediction technique for the study of fish-like swimming.

Lucas KN, Dabiri JO, Lauder GV.

PLoS One. 2017 Dec 7;12(12):e0189225. doi: 10.1371/journal.pone.0189225. eCollection 2017.

9.

Identification of individual coherent sets associated with flow trajectories using coherent structure coloring.

Schlueter-Kuck KL, Dabiri JO.

Chaos. 2017 Sep;27(9):091101. doi: 10.1063/1.4993862.

PMID:
28964141
10.

Motile cilia create fluid-mechanical microhabitats for the active recruitment of the host microbiome.

Nawroth JC, Guo H, Koch E, Heath-Heckman EAC, Hermanson JC, Ruby EG, Dabiri JO, Kanso E, McFall-Ngai M.

Proc Natl Acad Sci U S A. 2017 Sep 5;114(36):9510-9516. doi: 10.1073/pnas.1706926114. Epub 2017 Aug 23.

11.

Biomechanics: How fish feel the flow.

Dabiri JO.

Nature. 2017 Jul 27;547(7664):406-407. doi: 10.1038/nature23096. Epub 2017 Jul 12. No abstract available.

PMID:
28700572
12.

How the bending kinematics of swimming lampreys build negative pressure fields for suction thrust.

Gemmell BJ, Fogerson SM, Costello JH, Morgan JR, Dabiri JO, Colin SP.

J Exp Biol. 2016 Dec 15;219(Pt 24):3884-3895.

13.

Suction-based propulsion as a basis for efficient animal swimming.

Gemmell BJ, Colin SP, Costello JH, Dabiri JO.

Nat Commun. 2015 Nov 3;6:8790. doi: 10.1038/ncomms9790.

14.

Multi-jet propulsion organized by clonal development in a colonial siphonophore.

Costello JH, Colin SP, Gemmell BJ, Dabiri JO, Sutherland KR.

Nat Commun. 2015 Sep 1;6:8158. doi: 10.1038/ncomms9158.

15.

Bending rules for animal propulsion.

Lucas KN, Johnson N, Beaulieu WT, Cathcart E, Tirrell G, Colin SP, Gemmell BJ, Dabiri JO, Costello JH.

Nat Commun. 2014;5:3293. doi: 10.1038/ncomms4293.

PMID:
24548870
16.

An algorithm to estimate unsteady and quasi-steady pressure fields from velocity field measurements.

Dabiri JO, Bose S, Gemmell BJ, Colin SP, Costello JH.

J Exp Biol. 2014 Feb 1;217(Pt 3):331-6. doi: 10.1242/jeb.092767. Epub 2013 Oct 10.

17.

Passive energy recapture in jellyfish contributes to propulsive advantage over other metazoans.

Gemmell BJ, Costello JH, Colin SP, Stewart CJ, Dabiri JO, Tafti D, Priya S.

Proc Natl Acad Sci U S A. 2013 Oct 29;110(44):17904-9. doi: 10.1073/pnas.1306983110. Epub 2013 Oct 7.

18.

Biomimetic and live medusae reveal the mechanistic advantages of a flexible bell margin.

Colin SP, Costello JH, Dabiri JO, Villanueva A, Blottman JB, Gemmell BJ, Priya S.

PLoS One. 2012;7(11):e48909. doi: 10.1371/journal.pone.0048909. Epub 2012 Nov 7.

19.

A tissue-engineered jellyfish with biomimetic propulsion.

Nawroth JC, Lee H, Feinberg AW, Ripplinger CM, McCain ML, Grosberg A, Dabiri JO, Parker KK.

Nat Biotechnol. 2012 Aug;30(8):792-7.

20.

Quantitatively measuring in situ flows using a self-contained underwater velocimetry apparatus (SCUVA).

Katija K, Colin SP, Costello JH, Dabiri JO.

J Vis Exp. 2011 Oct 31;(56):e2615. doi: 10.3791/2615.

21.

Ecosystem engineers in the pelagic realm: alteration of habitat by species ranging from microbes to jellyfish.

Breitburg DL, Crump BC, Dabiri JO, Gallegos CL.

Integr Comp Biol. 2010 Aug;50(2):188-200. doi: 10.1093/icb/icq051. Epub 2010 Jun 16.

PMID:
21558198
22.

Stealth predation and the predatory success of the invasive ctenophore Mnemiopsis leidyi.

Colin SP, Costello JH, Hansson LJ, Titelman J, Dabiri JO.

Proc Natl Acad Sci U S A. 2010 Oct 5;107(40):17223-7. doi: 10.1073/pnas.1003170107. Epub 2010 Sep 20.

23.

Fish schooling as a basis for vertical axis wind turbine farm design.

Whittlesey RW, Liska S, Dabiri JO.

Bioinspir Biomim. 2010 Sep;5(3):035005. doi: 10.1088/1748-3182/5/3/035005. Epub 2010 Aug 20.

PMID:
20729568
24.

A Lagrangian approach to identifying vortex pinch-off.

O'Farrell C, Dabiri JO.

Chaos. 2010 Mar;20(1):017513. doi: 10.1063/1.3275499.

PMID:
20370303
25.

A wake-based correlate of swimming performance and foraging behavior in seven co-occurring jellyfish species.

Dabiri JO, Colin SP, Katija K, Costello JH.

J Exp Biol. 2010 Apr;213(Pt 8):1217-25. doi: 10.1242/jeb.034660.

26.

Phenotypic plasticity in juvenile jellyfish medusae facilitates effective animal-fluid interaction.

Nawroth JC, Feitl KE, Colin SP, Costello JH, Dabiri JO.

Biol Lett. 2010 Jun 23;6(3):389-93. doi: 10.1098/rsbl.2010.0068. Epub 2010 Mar 24.

27.

Functional morphology and fluid interactions during early development of the scyphomedusa Aurelia aurita.

Feitl KE, Millett AF, Colin SP, Dabiri JO, Costello JH.

Biol Bull. 2009 Dec;217(3):283-91.

PMID:
20040752
28.

A viscosity-enhanced mechanism for biogenic ocean mixing.

Katija K, Dabiri JO.

Nature. 2009 Jul 30;460(7255):624-6. doi: 10.1038/nature08207.

PMID:
19641595
29.

Lagrangian coherent structures in low Reynolds number swimming.

Wilson MM, Peng J, Dabiri JO, Eldredge JD.

J Phys Condens Matter. 2009 May 20;21(20):204105. doi: 10.1088/0953-8984/21/20/204105. Epub 2009 Apr 21.

PMID:
21825514
30.

The 'upstream wake' of swimming and flying animals and its correlation with propulsive efficiency.

Peng J, Dabiri JO.

J Exp Biol. 2008 Aug;211(Pt 16):2669-77. doi: 10.1242/jeb.015883.

31.

An overview of a Lagrangian method for analysis of animal wake dynamics.

Peng J, Dabiri JO.

J Exp Biol. 2008 Jan;211(Pt 2):280-7. doi: 10.1242/jeb.007641.

32.

Renewable fluid dynamic energy derived from aquatic animal locomotion.

Dabiri JO.

Bioinspir Biomim. 2007 Sep;2(3):L1-3. Epub 2007 Sep 10.

PMID:
17848785
33.

Morphological diversity of medusan lineages constrained by animal-fluid interactions.

Dabiri JO, Colin SP, Costello JH.

J Exp Biol. 2007 Jun;210(Pt 11):1868-73.

34.
35.

Fast-swimming hydromedusae exploit velar kinematics to form an optimal vortex wake.

Dabiri JO, Colin SP, Costello JH.

J Exp Biol. 2006 Jun;209(Pt 11):2025-33.

36.

Optimal vortex formation as an index of cardiac health.

Gharib M, Rambod E, Kheradvar A, Sahn DJ, Dabiri JO.

Proc Natl Acad Sci U S A. 2006 Apr 18;103(16):6305-8. Epub 2006 Apr 10.

37.

On the estimation of swimming and flying forces from wake measurements.

Dabiri JO.

J Exp Biol. 2005 Sep;208(Pt 18):3519-32. Erratum in: J Exp Biol. 2006 Apr;209(Pt 7):1364.

38.

The role of optimal vortex formation in biological fluid transport.

Dabiri JO, Gharib M.

Proc Biol Sci. 2005 Aug 7;272(1572):1557-60.

39.

Flow patterns generated by oblate medusan jellyfish: field measurements and laboratory analyses.

Dabiri JO, Colin SP, Costello JH, Gharib M.

J Exp Biol. 2005 Apr;208(Pt 7):1257-65.

40.

Sensitivity analysis of kinematic approximations in dynamic medusan swimming models.

Dabiri JO, Gharib M.

J Exp Biol. 2003 Oct;206(Pt 20):3675-80.

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