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Items: 1 to 50 of 51

1.

Characterization of CRISPR-Cas Systems in Serratia marcescens Isolated from Rhynchophorus ferrugineus (Olivier, 1790) (Coleoptera: Curculionidae).

Scrascia M, D'Addabbo P, Roberto R, Porcelli F, Oliva M, Calia C, Dionisi AM, Pazzani C.

Microorganisms. 2019 Sep 19;7(9). pii: E368. doi: 10.3390/microorganisms7090368.

2.

Concurrent chromothripsis events in a case of TP53 depleted acute myeloid leukemia with myelodysplasia-related changes.

Tolomeo D, L'Abbate A, Lonoce A, D'Addabbo P, Miccoli MF, Lo Cunsolo C, Iuzzolino P, Palumbo O, Carella M, Racanelli V, Mazza T, Ottaviani E, Martinelli G, Macchia G, Storlazzi CT.

Cancer Genet. 2019 Sep;237:63-68. doi: 10.1016/j.cancergen.2019.06.009. Epub 2019 Jun 12.

PMID:
31447067
3.

Genomic inversions and GOLGA core duplicons underlie disease instability at the 15q25 locus.

Maggiolini FAM, Cantsilieris S, D'Addabbo P, Manganelli M, Coe BP, Dumont BL, Sanders AD, Pang AWC, Vollger MR, Palumbo O, Palumbo P, Accadia M, Carella M, Eichler EE, Antonacci F.

PLoS Genet. 2019 Mar 27;15(3):e1008075. doi: 10.1371/journal.pgen.1008075. eCollection 2019 Mar.

4.

Correction: MYC-containing amplicons in acute myeloid leukemia: genomic structures, evolution, and transcriptional consequences.

L'Abbate A, Tolomeo D, Cifola I, Severgnini M, Turchiano A, Augello B, Squeo G, D'Addabbo P, Traversa D, Daniele G, Lonoce A, Pafundi M, Carella M, Palumbo O, Dolnik A, Muehlematter D, Schoumans J, Van Roy N, De Bellis G, Martinelli G, Merla G, Bullinger L, Haferlach C, Storlazzi CT.

Leukemia. 2018 Oct;32(10):2304. doi: 10.1038/s41375-018-0177-y.

PMID:
29985446
5.

Myoblast Myogenic Differentiation but Not Fusion Process Is Inhibited via MyoD Tetraplex Interaction.

Testa S, D'Addabbo P, Fornetti E, Belli R, Fuoco C, Bernardini S, Cannata S, Frezza D, Gargioli C.

Oxid Med Cell Longev. 2018 May 7;2018:7640272. doi: 10.1155/2018/7640272. eCollection 2018.

6.

Association between Psoriasis and haplotypes of the IgH 3' Regulatory Region 1.

D'Addabbo P, Serone E, Esposito M, Vaccari G, Gargioli C, Frezza D, Bianchi L.

Gene. 2018 Aug 30;669:47-51. doi: 10.1016/j.gene.2018.05.090. Epub 2018 May 24.

PMID:
29802990
7.

Inversion variants in human and primate genomes.

Catacchio CR, Maggiolini FAM, D'Addabbo P, Bitonto M, Capozzi O, Lepore Signorile M, Miroballo M, Archidiacono N, Eichler EE, Ventura M, Antonacci F.

Genome Res. 2018 Jun;28(6):910-920. doi: 10.1101/gr.234831.118. Epub 2018 May 18.

8.

Association between IgH enhancer hs1.2 and type 1 diabetes.

Cianci R, D'Addabbo P, Gambassi G, Lolli S, Serone E, Rizzi A, Pitocco D, Pandolfi F, Frezza D.

Acta Diabetol. 2018 May;55(5):443-448. doi: 10.1007/s00592-018-1103-5. Epub 2018 Feb 13.

PMID:
29441414
9.

Epigenetic origin of evolutionary novel centromeres.

Tolomeo D, Capozzi O, Stanyon RR, Archidiacono N, D'Addabbo P, Catacchio CR, Purgato S, Perini G, Schempp W, Huddleston J, Malig M, Eichler EE, Rocchi M.

Sci Rep. 2017 Feb 3;7:41980. doi: 10.1038/srep41980.

10.

A novel group of IncQ1 plasmids conferring multidrug resistance.

Oliva M, Monno R, D'Addabbo P, Pesole G, Dionisi AM, Scrascia M, Chiara M, Horner DS, Manzari C, Luzzi I, Calia C, D'Erchia AM, Pazzani C.

Plasmid. 2017 Jan;89:22-26. doi: 10.1016/j.plasmid.2016.11.005. Epub 2016 Dec 1.

PMID:
27916622
11.

Inter-varietal structural variation in grapevine genomes.

Cardone MF, D'Addabbo P, Alkan C, Bergamini C, Catacchio CR, Anaclerio F, Chiatante G, Marra A, Giannuzzi G, Perniola R, Ventura M, Antonacci D.

Plant J. 2016 Nov;88(4):648-661. doi: 10.1111/tpj.13274. Epub 2016 Sep 16.

12.

Evidence for a quadruplex structure in the polymorphic hs1.2 enhancer of the immunoglobulin heavy chain 3' regulatory regions and its conservation in mammals.

Sette M, D'Addabbo P, Kelly G, Cicconi A, Micheli E, Cacchione S, Poma A, Gargioli C, Giambra V, Frezza D.

Biopolymers. 2016 Nov;105(11):768-78. doi: 10.1002/bip.22891.

13.

Identification of pigmented Serratia marcescens symbiotically associated with Rhynchophorus ferrugineus Olivier (Coleoptera: Curculionidae).

Scrascia M, Pazzani C, Valentini F, Oliva M, Russo V, D'Addabbo P, Porcelli F.

Microbiologyopen. 2016 Oct;5(5):883-890. doi: 10.1002/mbo3.377. Epub 2016 Jun 1.

14.

Identification of Bari Transposons in 23 Sequenced Drosophila Genomes Reveals Novel Structural Variants, MITEs and Horizontal Transfer.

Palazzo A, Lovero D, D'Addabbo P, Caizzi R, Marsano RM.

PLoS One. 2016 May 23;11(5):e0156014. doi: 10.1371/journal.pone.0156014. eCollection 2016.

15.

Involvement of DNA methylation in the control of cell growth during heat stress in tobacco BY-2 cells.

Centomani I, Sgobba A, D'Addabbo P, Dipierro N, Paradiso A, De Gara L, Dipierro S, Viggiano L, de Pinto MC.

Protoplasma. 2015 Nov;252(6):1451-9. doi: 10.1007/s00709-015-0772-y. Epub 2015 Feb 25.

PMID:
25712591
16.

Ring chromosomes, breakpoint clusters, and neocentromeres in sarcomas.

Macchia G, Nord KH, Zoli M, Purgato S, D'Addabbo P, Whelan CW, Carbone L, Perini G, Mertens F, Rocchi M, Storlazzi CT.

Genes Chromosomes Cancer. 2015 Mar;54(3):156-67. doi: 10.1002/gcc.22228. Epub 2014 Nov 25.

PMID:
25421174
17.

The change in Ig regulation from children to adults disconnects the correlation with the 3'RR hs1.2 polymorphism.

Serone E, Daleno C, Principi N, Porretti L, Iacoacci V, Gargioli C, Magrini A, Massoud R, D'Addabbo P, Cattalini M, Giambra V, Plebani A, Esposito S, Frezza D.

BMC Immunol. 2014 Nov 13;15:45. doi: 10.1186/s12865-014-0045-0.

18.

Genomic organization and evolution of double minutes/homogeneously staining regions with MYC amplification in human cancer.

L'Abbate A, Macchia G, D'Addabbo P, Lonoce A, Tolomeo D, Trombetta D, Kok K, Bartenhagen C, Whelan CW, Palumbo O, Severgnini M, Cifola I, Dugas M, Carella M, De Bellis G, Rocchi M, Carbone L, Storlazzi CT.

Nucleic Acids Res. 2014 Aug;42(14):9131-45. doi: 10.1093/nar/gku590. Epub 2014 Jul 17.

19.

Isolation and partial characterization of bacteriophages infecting Pseudomonas syringae pv. actinidiae, causal agent of kiwifruit bacterial canker.

Di Lallo G, Evangelisti M, Mancuso F, Ferrante P, Marcelletti S, Tinari A, Superti F, Migliore L, D'Addabbo P, Frezza D, Scortichini M, Thaller MC.

J Basic Microbiol. 2014 Nov;54(11):1210-21. doi: 10.1002/jobm.201300951. Epub 2014 May 9.

PMID:
24810619
20.

Mosquitoes LTR retrotransposons: a deeper view into the genomic sequence of Culex quinquefasciatus.

Marsano RM, Leronni D, D'Addabbo P, Viggiano L, Tarasco E, Caizzi R.

PLoS One. 2012;7(2):e30770. doi: 10.1371/journal.pone.0030770. Epub 2012 Feb 24.

21.

Polymorphisms of the IgH enhancer HS1.2 and risk of systemic lupus erythematosus.

Frezza D, Tolusso B, Giambra V, Gremese E, Marchini M, Nowik M, Serone E, D'Addabbo P, Mattioli C, Canestri S, Petricca L, D'Antona G, Birshtein BK, Scorza R, Ferraccioli G.

Ann Rheum Dis. 2012 Aug;71(8):1309-15. doi: 10.1136/ard.2010.147025. Epub 2012 Jan 31.

PMID:
22294636
22.

Refinement of Bos taurus sequence assembly based on BAC-FISH experiments.

Partipilo G, D'Addabbo P, Lacalandra GM, Liu GE, Rocchi M.

BMC Genomics. 2011 Dec 30;12:639. doi: 10.1186/1471-2164-12-639.

23.

Analysis of high-identity segmental duplications in the grapevine genome.

Giannuzzi G, D'Addabbo P, Gasparro M, Martinelli M, Carelli FN, Antonacci D, Ventura M.

BMC Genomics. 2011 Aug 26;12:436. doi: 10.1186/1471-2164-12-436.

24.

Position and sequence conservation in Amniota of polymorphic enhancer HS1.2 within the palindrome of IgH 3'Regulatory Region.

D'Addabbo P, Scascitelli M, Giambra V, Rocchi M, Frezza D.

BMC Evol Biol. 2011 Mar 15;11:71. doi: 10.1186/1471-2148-11-71.

25.

Gene amplification as double minutes or homogeneously staining regions in solid tumors: origin and structure.

Storlazzi CT, Lonoce A, Guastadisegni MC, Trombetta D, D'Addabbo P, Daniele G, L'Abbate A, Macchia G, Surace C, Kok K, Ullmann R, Purgato S, Palumbo O, Carella M, Ambros PF, Rocchi M.

Genome Res. 2010 Sep;20(9):1198-206. doi: 10.1101/gr.106252.110. Epub 2010 Jul 14.

26.

Genomic segmental duplications on the basis of the t(9;22) rearrangement in chronic myeloid leukemia.

Albano F, Anelli L, Zagaria A, Coccaro N, D'Addabbo P, Liso V, Rocchi M, Specchia G.

Oncogene. 2010 Apr 29;29(17):2509-16. doi: 10.1038/onc.2009.524. Epub 2010 Jan 25.

PMID:
20101201
27.

Characterization of a hotspot region on chromosome 12 for amplification in ring chromosomes in atypical lipomatous tumors.

Trombetta D, Mertens F, Lonoce A, D'Addabbo P, Rennstam K, Mandahl N, Storlazzi CT.

Genes Chromosomes Cancer. 2009 Nov;48(11):993-1001. doi: 10.1002/gcc.20700.

PMID:
19691106
28.

Identification and molecular characterization of recurrent genomic deletions on 7p12 in the IKZF1 gene in a large cohort of BCR-ABL1-positive acute lymphoblastic leukemia patients: on behalf of Gruppo Italiano Malattie Ematologiche dell'Adulto Acute Leukemia Working Party (GIMEMA AL WP).

Iacobucci I, Storlazzi CT, Cilloni D, Lonetti A, Ottaviani E, Soverini S, Astolfi A, Chiaretti S, Vitale A, Messa F, Impera L, Baldazzi C, D'Addabbo P, Papayannidis C, Lonoce A, Colarossi S, Vignetti M, Piccaluga PP, Paolini S, Russo D, Pane F, Saglio G, Baccarani M, Foà R, Martinelli G.

Blood. 2009 Sep 3;114(10):2159-67. doi: 10.1182/blood-2008-08-173963. Epub 2009 Jul 9. Erratum in: Blood. 2010 Sep 23;116(12):2196.

PMID:
19589926
29.

Evolutionary descent of a human chromosome 6 neocentromere: a jump back to 17 million years ago.

Capozzi O, Purgato S, D'Addabbo P, Archidiacono N, Battaglia P, Baroncini A, Capucci A, Stanyon R, Della Valle G, Rocchi M.

Genome Res. 2009 May;19(5):778-84. doi: 10.1101/gr.085688.108.

30.

Evolutionary-new centromeres preferentially emerge within gene deserts.

Lomiento M, Jiang Z, D'Addabbo P, Eichler EE, Rocchi M.

Genome Biol. 2008;9(12):R173. doi: 10.1186/gb-2008-9-12-r173. Epub 2008 Dec 16.

31.

A satellite-like sequence, representing a "clone gap" in the human genome, was likely involved in the seeding of a novel centromere in macaque.

Carbone L, D'addabbo P, Cardone MF, Teti MG, Misceo D, Vessere GM, de Jong PJ, Rocchi M.

Chromosoma. 2009 Apr;118(2):269-77. doi: 10.1007/s00412-008-0196-y. Epub 2008 Dec 2.

PMID:
19048265
32.

Bone marrow ectopic expression of a non-coding RNA in childhood T-cell acute lymphoblastic leukemia with a novel t(2;11)(q11.2;p15.1) translocation.

Guastadisegni MC, Lonoce A, Impera L, Albano F, D'Addabbo P, Caruso S, Vasta I, Panagopoulos I, Leszl A, Basso G, Rocchi M, Storlazzi CT.

Mol Cancer. 2008 Oct 23;7:80. doi: 10.1186/1476-4598-7-80.

33.

Refinement of macaque synteny arrangement with respect to the official rheMac2 macaque sequence assembly.

Roberto R, Misceo D, D'Addabbo P, Archidiacono N, Rocchi M.

Chromosome Res. 2008;16(7):977-85. doi: 10.1007/s10577-008-1255-1. Epub 2008 Oct 10.

PMID:
18841486
34.

Hominoid chromosomal rearrangements on 17q map to complex regions of segmental duplication.

Cardone MF, Jiang Z, D'Addabbo P, Archidiacono N, Rocchi M, Eichler EE, Ventura M.

Genome Biol. 2008;9(2):R28. doi: 10.1186/gb-2008-9-2-r28. Epub 2008 Feb 7.

35.

Evolutionary history of chromosome 11 featuring four distinct centromere repositioning events in Catarrhini.

Cardone MF, Lomiento M, Teti MG, Misceo D, Roberto R, Capozzi O, D'Addabbo P, Ventura M, Rocchi M, Archidiacono N.

Genomics. 2007 Jul;90(1):35-43. Epub 2007 May 8.

36.

Evolutionary formation of new centromeres in macaque.

Ventura M, Antonacci F, Cardone MF, Stanyon R, D'Addabbo P, Cellamare A, Sprague LJ, Eichler EE, Archidiacono N, Rocchi M.

Science. 2007 Apr 13;316(5822):243-6.

37.

Independent centromere formation in a capricious, gene-free domain of chromosome 13q21 in Old World monkeys and pigs.

Cardone MF, Alonso A, Pazienza M, Ventura M, Montemurro G, Carbone L, de Jong PJ, Stanyon R, D'Addabbo P, Archidiacono N, She X, Eichler EE, Warburton PE, Rocchi M.

Genome Biol. 2006;7(10):R91. Epub 2006 Oct 13.

38.

t(3;12)(q26;q14) in polycythemia vera is associated with upregulation of the HMGA2 gene.

Storlazzi CT, Albano F, Locunsolo C, Lonoce A, Funes S, Guastadisegni MC, Cimarosto L, Impera L, D'Addabbo P, Panagopoulos I, Specchia G, Rocchi M.

Leukemia. 2006 Dec;20(12):2190-2. Epub 2006 Oct 5. No abstract available.

PMID:
17024113
39.

Proteins encoded by human Down syndrome critical region gene 1-like 2 (DSCR1L2) mRNA and by a novel DSCR1L2 mRNA isoform interact with cardiac troponin I (TNNI3).

Canaider S, Facchin F, Griffoni C, Casadei R, Vitale L, Lenzi L, Frabetti F, D'Addabbo P, Carinci P, Zannotti M, Strippoli P.

Gene. 2006 May 10;372:128-36. Epub 2006 Mar 3.

PMID:
16516408
40.

MYC-containing double minutes in hematologic malignancies: evidence in favor of the episome model and exclusion of MYC as the target gene.

Storlazzi CT, Fioretos T, Surace C, Lonoce A, Mastrorilli A, Strömbeck B, D'Addabbo P, Iacovelli F, Minervini C, Aventin A, Dastugue N, Fonatsch C, Hagemeijer A, Jotterand M, Mühlematter D, Lafage-Pochitaloff M, Nguyen-Khac F, Schoch C, Slovak ML, Smith A, Solè F, Van Roy N, Johansson B, Rocchi M.

Hum Mol Genet. 2006 Mar 15;15(6):933-42. Epub 2006 Feb 1.

PMID:
16452126
41.

Uncertainty principle of genetic information in a living cell.

Strippoli P, Canaider S, Noferini F, D'Addabbo P, Vitale L, Facchin F, Lenzi L, Casadei R, Carinci P, Zannotti M, Frabetti F.

Theor Biol Med Model. 2005 Sep 30;2:40.

42.

Molecular cytogenetic characterization of an ins(4;X) occurring as the sole abnormality in an aggressive, poorly differentiated soft tissue sarcoma.

Surace C, Storlazzi CT, Engellau J, Domanski HA, Gustafson P, Panagopoulos I, D'Addabbo P, Rocchi M, Mandahl N, Mertens F.

Virchows Arch. 2005 Nov;447(5):869-74. Epub 2005 Aug 26.

PMID:
16133367
43.

Gene expression profile analysis in human T lymphocytes from patients with Down Syndrome.

Giannone S, Strippoli P, Vitale L, Casadei R, Canaider S, Lenzi L, D'Addabbo P, Frabetti F, Facchin F, Farina A, Carinci P, Zannotti M.

Ann Hum Genet. 2004 Nov;68(Pt 6):546-54.

44.

Evolutionary history of chromosome 20.

Misceo D, Cardone MF, Carbone L, D'Addabbo P, de Jong PJ, Rocchi M, Archidiacono N.

Mol Biol Evol. 2005 Feb;22(2):360-6. Epub 2004 Oct 20.

PMID:
15496555
45.

Recurrent sites for new centromere seeding.

Ventura M, Weigl S, Carbone L, Cardone MF, Misceo D, Teti M, D'Addabbo P, Wandall A, Björck E, de Jong PJ, She X, Eichler EE, Archidiacono N, Rocchi M.

Genome Res. 2004 Sep;14(9):1696-703.

46.

Sequence analysis of ADARB1 gene in patients with familial bipolar disorder.

Amore M, Strippoli P, Laterza C, Tagariello P, Vitale L, Casadei R, Frabetti F, Canaider S, Lenzi L, D'Addabbo P, Carinci P, Torroni A, Ferrari G, Zannotti M.

J Affect Disord. 2004 Jul;81(1):79-85.

PMID:
15183604
47.

GeneRecords: a relational database for GenBank flat file parsing and data manipulation in personal computers.

D'Addabbo P, Lenzi L, Facchin F, Casadei R, Canaider S, Vitale L, Frabetti F, Carinci P, Zannotti M, Strippoli P.

Bioinformatics. 2004 Nov 1;20(16):2883-5. Epub 2004 May 14.

PMID:
15145799
48.

mRNA 5' region sequence incompleteness: a potential source of systematic errors in translation initiation codon assignment in human mRNAs.

Casadei R, Strippoli P, D'Addabbo P, Canaider S, Lenzi L, Vitale L, Giannone S, Frabetti F, Facchin F, Carinci P, Zannotti M.

Gene. 2003 Dec 4;321:185-93.

PMID:
14637006
49.

The human TruB family of pseudouridine synthase genes, including the Dyskeratosis Congenita 1 gene and the novel member TRUB1.

Zucchini C, Strippoli P, Biolchi A, Solmi R, Lenzi L, D'Addabbo P, Carinci P, Valvassori L.

Int J Mol Med. 2003 Jun;11(6):697-704.

PMID:
12736709
50.

Segmental paralogy in the human genome: a large-scale triplication on 1p, 6p, and 21q.

Strippoli P, D'Addabbo P, Lenzi L, Giannone S, Canaider S, Casadei R, Vitale L, Carinci P, Zannotti M.

Mamm Genome. 2002 Aug;13(8):456-62.

PMID:
12226712

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