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Items: 28


Comprehensive evaluation of complex polymicrobial specimens using next generation sequencing and standard microbiological culture.

Cummings LA, Hoogestraat DR, Rassoulian-Barrett SL, Rosenthal CA, Salipante SJ, Cookson BT, Hoffman NG.

Sci Rep. 2020 Mar 25;10(1):5446. doi: 10.1038/s41598-020-62424-x.


Benign Schwannoma of the Rectus Sheath: A Rare Abdominal Mass Treated in a Multidisciplinary Fashion.

Falcone JL, Cummings LA.

Am Surg. 2018 Mar 1;84(3):e100-e101. No abstract available.


Social Determinants of Health Are Associated with Markers of Renal Injury in Adolescents with Type 1 Diabetes.

Cummings LAM, Clarke A, Sochett E, Daneman D, Cherney DZ, Reich HN, Scholey JW, Dunger DB, Mahmud FH.

J Pediatr. 2018 Jul;198:247-253.e1. doi: 10.1016/j.jpeds.2018.03.030. Epub 2018 May 8.


Clinical Next Generation Sequencing Outperforms Standard Microbiological Culture for Characterizing Polymicrobial Samples.

Cummings LA, Kurosawa K, Hoogestraat DR, SenGupta DJ, Candra F, Doyle M, Thielges S, Land TA, Rosenthal CA, Hoffman NG, Salipante SJ, Cookson BT.

Clin Chem. 2016 Nov;62(11):1465-1473. Epub 2016 Sep 13.


Erratum for Salipante et al., Performance Comparison of Illumina and Ion Torrent Next-Generation Sequencing Platforms for 16S rRNA-Based Bacterial Community Profiling.

Salipante SJ, Kawashima T, Rosenthal C, Hoogestraat DR, Cummings LA, Sengupta DJ, Harkins TT, Cookson BT, Hoffman NG.

Appl Environ Microbiol. 2016 Jun 30;82(14):4453. doi: 10.1128/AEM.01390-16. Print 2016 Jul 15. No abstract available.


Application of whole-genome sequencing for bacterial strain typing in molecular epidemiology.

Salipante SJ, SenGupta DJ, Cummings LA, Land TA, Hoogestraat DR, Cookson BT.

J Clin Microbiol. 2015 Apr;53(4):1072-9. doi: 10.1128/JCM.03385-14. Epub 2015 Jan 28.


Performance comparison of Illumina and ion torrent next-generation sequencing platforms for 16S rRNA-based bacterial community profiling.

Salipante SJ, Kawashima T, Rosenthal C, Hoogestraat DR, Cummings LA, Sengupta DJ, Harkins TT, Cookson BT, Hoffman NG.

Appl Environ Microbiol. 2014 Dec;80(24):7583-91. doi: 10.1128/AEM.02206-14. Epub 2014 Sep 26. Erratum in: Appl Environ Microbiol. 2016 Jul 15;82(14):4453.


Whole genome sequencing indicates Corynebacterium jeikeium comprises 4 separate genomospecies and identifies a dominant genomospecies among clinical isolates.

Salipante SJ, Sengupta DJ, Cummings LA, Robinson A, Kurosawa K, Hoogestraat DR, Cookson BT.

Int J Med Microbiol. 2014 Nov;304(8):1001-10. doi: 10.1016/j.ijmm.2014.07.003. Epub 2014 Jul 25.


Whole-genome sequencing for high-resolution investigation of methicillin-resistant Staphylococcus aureus epidemiology and genome plasticity.

SenGupta DJ, Cummings LA, Hoogestraat DR, Butler-Wu SM, Shendure J, Cookson BT, Salipante SJ.

J Clin Microbiol. 2014 Aug;52(8):2787-96. doi: 10.1128/JCM.00759-14. Epub 2014 May 21.


Coinfection of Fusobacterium nucleatum and Actinomyces israelii in mastoiditis diagnosed by next-generation DNA sequencing.

Salipante SJ, Hoogestraat DR, Abbott AN, SenGupta DJ, Cummings LA, Butler-Wu SM, Stephens K, Cookson BT, Hoffman NG.

J Clin Microbiol. 2014 May;52(5):1789-92. doi: 10.1128/JCM.03133-13. Epub 2014 Feb 26.


Molecular diagnosis of Actinomadura madurae infection by 16S rRNA deep sequencing.

Salipante SJ, Sengupta DJ, Hoogestraat DR, Cummings LA, Bryant BH, Natividad C, Thielges S, Monsaas PW, Chau M, Barbee LA, Rosenthal C, Cookson BT, Hoffman NG.

J Clin Microbiol. 2013 Dec;51(12):4262-5. doi: 10.1128/JCM.02227-13. Epub 2013 Oct 9.


Regulation of phenotypic heterogeneity permits Salmonella evasion of the host caspase-1 inflammatory response.

Stewart MK, Cummings LA, Johnson ML, Berezow AB, Cookson BT.

Proc Natl Acad Sci U S A. 2011 Dec 20;108(51):20742-7. doi: 10.1073/pnas.1108963108. Epub 2011 Dec 5.


Humanized nonobese diabetic-scid IL2rgammanull mice are susceptible to lethal Salmonella Typhi infection.

Libby SJ, Brehm MA, Greiner DL, Shultz LD, McClelland M, Smith KD, Cookson BT, Karlinsey JE, Kinkel TL, Porwollik S, Canals R, Cummings LA, Fang FC.

Proc Natl Acad Sci U S A. 2010 Aug 31;107(35):15589-94. doi: 10.1073/pnas.1005566107. Epub 2010 Aug 16.


Adaptive Immune Responses during Salmonella Infection.

Cummings LA, Deatherage BL, Cookson BT.

EcoSal Plus. 2009 Aug;3(2). doi: 10.1128/ecosalplus.8.8.11.


Salmonella typhimurium coordinately regulates FliC location and reduces dendritic cell activation and antigen presentation to CD4+ T cells.

Alaniz RC, Cummings LA, Bergman MA, Rassoulian-Barrett SL, Cookson BT.

J Immunol. 2006 Sep 15;177(6):3983-93.


In vivo, fliC expression by Salmonella enterica serovar Typhimurium is heterogeneous, regulated by ClpX, and anatomically restricted.

Cummings LA, Wilkerson WD, Bergsbaken T, Cookson BT.

Mol Microbiol. 2006 Aug;61(3):795-809. Epub 2006 Jun 27.


FliC-specific CD4+ T cell responses are restricted by bacterial regulation of antigen expression.

Cummings LA, Barrett SL, Wilkerson WD, Fellnerova I, Cookson BT.

J Immunol. 2005 Jun 15;174(12):7929-38.


CD4+ T cells and toll-like receptors recognize Salmonella antigens expressed in bacterial surface organelles.

Bergman MA, Cummings LA, Barrett SL, Smith KD, Lara JC, Aderem A, Cookson BT.

Infect Immun. 2005 Mar;73(3):1350-6.


Identification of different specificity requirements between SGK1 and PKBalpha.

Murray JT, Cummings LA, Bloomberg GB, Cohen P.

FEBS Lett. 2005 Feb 14;579(5):991-4. Epub 2005 Jan 13.


The U.S. Army Center for Health Promotion and Preventive Medicine response to the Pentagon attack: a multipronged prevention-based approach.

Wells JD, Egerton WE, Cummings LA, Jordan N, Cox AL, Dydek GJ, Delaney K.

Mil Med. 2002 Sep;167(9 Suppl):64-7.


Genetic privacy and academic medicine: the Oregon experience.

Cummings LA, Magnusson R.

Acad Med. 2001 Nov;76(11):1089-93. Review.


Bacterial antigens elicit T cell responses via adaptive and transitional immune recognition.

Cookson BT, Cummings LA, Rassoulian Barrett SL.

Curr Opin Microbiol. 2001 Jun;4(3):267-73. Review.


Effects of chronic adult periodontitis and endotoxin (LPS) on gingival fibroblast plasma membrane Ca++-pump.

Stein SH, Borke JL, Cummings LA.

Connect Tissue Res. 1999;40(1):59-66.


Effects of media, atmosphere, and incubation time on colonial morphology of Arcanobacterium haemolyticum.

Cummings LA, Wu WK, Larson AM, Gavin SE, Fine JS, Coyle MB.

J Clin Microbiol. 1993 Dec;31(12):3223-6.


Splitting of wheelrunning rhythms by castrated or steroid treated male and female hamsters.

Morin LP, Cummings LA.

Physiol Behav. 1982 Oct;29(4):665-75.


Effect of surgical or photoperiodic castration, testosterone replacement or pinealectomy on male hamster running rhythmicity.

Morin LP, Cummings LA.

Physiol Behav. 1981 May;26(5):825-38. No abstract available.


Placental diffusing capacity and fetal development in exercising or hypoxic guinea pigs.

Gilbert RD, Cummings LA, Juchau MR, Longo LD.

J Appl Physiol Respir Environ Exerc Physiol. 1979 Apr;46(4):828-34. No abstract available.


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