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Items: 21

1.

Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe.

Frantz LAF, Haile J, Lin AT, Scheu A, Geörg C, Benecke N, Alexander M, Linderholm A, Mullin VE, Daly KG, Battista VM, Price M, Gron KJ, Alexandri P, Arbogast RM, Arbuckle B, Bӑlӑşescu A, Barnett R, Bartosiewicz L, Baryshnikov G, Bonsall C, Borić D, Boroneanţ A, Bulatović J, Çakirlar C, Carretero JM, Chapman J, Church M, Crooijmans R, De Cupere B, Detry C, Dimitrijevic V, Dumitraşcu V, du Plessis L, Edwards CJ, Erek CM, Erim-Özdoğan A, Ervynck A, Fulgione D, Gligor M, Götherström A, Gourichon L, Groenen MAM, Helmer D, Hongo H, Horwitz LK, Irving-Pease EK, Lebrasseur O, Lesur J, Malone C, Manaseryan N, Marciniak A, Martlew H, Mashkour M, Matthews R, Matuzeviciute GM, Maziar S, Meijaard E, McGovern T, Megens HJ, Miller R, Mohaseb AF, Orschiedt J, Orton D, Papathanasiou A, Pearson MP, Pinhasi R, Radmanović D, Ricaut FX, Richards M, Sabin R, Sarti L, Schier W, Sheikhi S, Stephan E, Stewart JR, Stoddart S, Tagliacozzo A, Tasić N, Trantalidou K, Tresset A, Valdiosera C, van den Hurk Y, Van Poucke S, Vigne JD, Yanevich A, Zeeb-Lanz A, Triantafyllidis A, Gilbert MTP, Schibler J, Rowley-Conwy P, Zeder M, Peters J, Cucchi T, Bradley DG, Dobney K, Burger J, Evin A, Girdland-Flink L, Larson G.

Proc Natl Acad Sci U S A. 2019 Aug 27;116(35):17231-17238. doi: 10.1073/pnas.1901169116. Epub 2019 Aug 12.

2.

Exploring Rattus praetor (Rodentia, Muridae) as a possible species complex using geometric morphometrics on dental morphology.

Hulme-Beaman A, Cucchi T, Evin A, Searle JB, Dobney K.

Mamm Biol. 2018 Sep;92:62-67. doi: 10.1016/j.mambio.2018.04.002.

3.

A test for paedomorphism in domestic pig cranial morphology.

Evin A, Owen J, Larson G, Debiais-Thibaud M, Cucchi T, Vidarsdottir US, Dobney K.

Biol Lett. 2017 Aug;13(8). pii: 20170321. doi: 10.1098/rsbl.2017.0321.

4.

Reply to Dekel et al.: Preagricultural commensal niches for the house mouse and origins of human sedentism.

Weissbrod L, Marshall FB, Valla FR, Khalaily H, Bar-Oz G, Auffray JC, Vigne JD, Cucchi T.

Proc Natl Acad Sci U S A. 2017 Jul 3;114(27):E5281-E5282. doi: 10.1073/pnas.1706914114. Epub 2017 Jun 13. No abstract available.

5.

Detecting taxonomic and phylogenetic signals in equid cheek teeth: towards new palaeontological and archaeological proxies.

Cucchi T, Mohaseb A, Peigné S, Debue K, Orlando L, Mashkour M.

R Soc Open Sci. 2017 Apr 5;4(4):160997. doi: 10.1098/rsos.160997. eCollection 2017 Apr.

6.

Origins of house mice in ecological niches created by settled hunter-gatherers in the Levant 15,000 y ago.

Weissbrod L, Marshall FB, Valla FR, Khalaily H, Bar-Oz G, Auffray JC, Vigne JD, Cucchi T.

Proc Natl Acad Sci U S A. 2017 Apr 18;114(16):4099-4104. doi: 10.1073/pnas.1619137114. Epub 2017 Mar 27.

7.

Social Complexification and Pig (Sus scrofa) Husbandry in Ancient China: A Combined Geometric Morphometric and Isotopic Approach.

Cucchi T, Dai L, Balasse M, Zhao C, Gao J, Hu Y, Yuan J, Vigne JD.

PLoS One. 2016 Jul 6;11(7):e0158523. doi: 10.1371/journal.pone.0158523. eCollection 2016. Erratum in: PLoS One. 2016;11(8):e0162134.

8.

An Ecological and Evolutionary Framework for Commensalism in Anthropogenic Environments.

Hulme-Beaman A, Dobney K, Cucchi T, Searle JB.

Trends Ecol Evol. 2016 Aug;31(8):633-645. doi: 10.1016/j.tree.2016.05.001. Epub 2016 Jun 10.

9.

Earliest "Domestic" Cats in China Identified as Leopard Cat (Prionailurus bengalensis).

Vigne JD, Evin A, Cucchi T, Dai L, Yu C, Hu S, Soulages N, Wang W, Sun Z, Gao J, Dobney K, Yuan J.

PLoS One. 2016 Jan 22;11(1):e0147295. doi: 10.1371/journal.pone.0147295. eCollection 2016.

10.

Phenotype and animal domestication: A study of dental variation between domestic, wild, captive, hybrid and insular Sus scrofa.

Evin A, Dobney K, Schafberg R, Owen J, Vidarsdottir US, Larson G, Cucchi T.

BMC Evol Biol. 2015 Feb 4;15:6. doi: 10.1186/s12862-014-0269-x.

11.

Correction to 'Unravelling the complexity of domestication: a case study using morphometrics and ancient DNA analyses of archaeological pigs from Romania'.

Evin A, Flink LG, Bălăşescu A, Popovici D, Andreescu R, Bailey D, Mirea P, Lazăr C, Boroneanţ A, Bonsall C, Strand Vidarsdottir U, Brehard S, Tresset A, Cucchi T, Larson G, Dobney K.

Philos Trans R Soc Lond B Biol Sci. 2015 Mar 19;370(1664):20150018. doi: 10.1098/rstb.2015.0018. No abstract available.

12.

Unravelling the complexity of domestication: a case study using morphometrics and ancient DNA analyses of archaeological pigs from Romania.

Evin A, Flink LG, Bălăşescu A, Popovici D, Andreescu R, Bailey D, Mirea P, Lazăr C, Boroneanţ A, Bonsall C, Vidarsdottir US, Brehard S, Tresset A, Cucchi T, Larson G, Dobney K.

Philos Trans R Soc Lond B Biol Sci. 2015 Jan 19;370(1660):20130616. doi: 10.1098/rstb.2013.0616. Erratum in: Philos Trans R Soc Lond B Biol Sci. 2015 Mar 19;370(1664):20150018.

13.

The changing pace of insular life: 5000 years of microevolution in the Orkney vole (Microtus arvalis orcadensis).

Cucchi T, Barnett R, Martínková N, Renaud S, Renvoisé E, Evin A, Sheridan A, Mainland I, Wickham-Jones C, Tougard C, Quéré JP, Pascal M, Pascal M, Heckel G, O'Higgins P, Searle JB, Dobney KM.

Evolution. 2014 Oct;68(10):2804-20. doi: 10.1111/evo.12476. Epub 2014 Jul 29.

14.

Ancient urban ecology reconstructed from archaeozoological remains of small mammals in the Near East.

Weissbrod L, Malkinson D, Cucchi T, Gadot Y, Finkelstein I, Bar-Oz G.

PLoS One. 2014 Mar 12;9(3):e91795. doi: 10.1371/journal.pone.0091795. eCollection 2014.

15.

Divergent evolutionary processes associated with colonization of offshore islands.

Martínková N, Barnett R, Cucchi T, Struchen R, Pascal M, Pascal M, Fischer MC, Higham T, Brace S, Ho SY, Quéré JP, O'Higgins P, Excoffier L, Heckel G, Hoelzel AR, Dobney KM, Searle JB.

Mol Ecol. 2013 Oct;22(20):5205-20. doi: 10.1111/mec.12462. Epub 2013 Sep 3.

16.

Pig domestication and human-mediated dispersal in western Eurasia revealed through ancient DNA and geometric morphometrics.

Ottoni C, Flink LG, Evin A, Geörg C, De Cupere B, Van Neer W, Bartosiewicz L, Linderholm A, Barnett R, Peters J, Decorte R, Waelkens M, Vanderheyden N, Ricaut FX, Cakirlar C, Cevik O, Hoelzel AR, Mashkour M, Karimlu AF, Seno SS, Daujat J, Brock F, Pinhasi R, Hongo H, Perez-Enciso M, Rasmussen M, Frantz L, Megens HJ, Crooijmans R, Groenen M, Arbuckle B, Benecke N, Vidarsdottir US, Burger J, Cucchi T, Dobney K, Larson G.

Mol Biol Evol. 2013 Apr;30(4):824-32. doi: 10.1093/molbev/mss261. Epub 2012 Nov 22.

17.

First wave of cultivators spread to Cyprus at least 10,600 y ago.

Vigne JD, Briois F, Zazzo A, Willcox G, Cucchi T, Thiébault S, Carrère I, Franel Y, Touquet R, Martin C, Moreau C, Comby C, Guilaine J.

Proc Natl Acad Sci U S A. 2012 May 29;109(22):8445-9. doi: 10.1073/pnas.1201693109. Epub 2012 May 7.

18.

A dig into the past mitochondrial diversity of Corsican goats reveals the influence of secular herding practices.

Hughes S, Fernández H, Cucchi T, Duffraisse M, Casabianca F, Istria D, Pompanon F, Vigne JD, Hänni C, Taberlet P.

PLoS One. 2012;7(1):e30272. doi: 10.1371/journal.pone.0030272. Epub 2012 Jan 27.

19.

Genetic differentiation of the house mouse around the Mediterranean basin: matrilineal footprints of early and late colonization.

Bonhomme F, Orth A, Cucchi T, Rajabi-Maham H, Catalan J, Boursot P, Auffray JC, Britton-Davidian J.

Proc Biol Sci. 2011 Apr 7;278(1708):1034-43. doi: 10.1098/rspb.2010.1228. Epub 2010 Sep 29.

20.

Phylogeny and ancient DNA of Sus provides insights into neolithic expansion in Island Southeast Asia and Oceania.

Larson G, Cucchi T, Fujita M, Matisoo-Smith E, Robins J, Anderson A, Rolett B, Spriggs M, Dolman G, Kim TH, Thuy NT, Randi E, Doherty M, Due RA, Bollt R, Djubiantono T, Griffin B, Intoh M, Keane E, Kirch P, Li KT, Morwood M, Pedriña LM, Piper PJ, Rabett RJ, Shooter P, Van den Bergh G, West E, Wickler S, Yuan J, Cooper A, Dobney K.

Proc Natl Acad Sci U S A. 2007 Mar 20;104(12):4834-9. Epub 2007 Mar 14.

21.

[A new species of wild mice on the Island of Cyprus].

Bonhomme F, Orth A, Cucchi T, Hadjisterkotis E, Vigne JD, Auffray JC.

C R Biol. 2004 May;327(5):501-7. French.

PMID:
15255480

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