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Best matches for Csűros M[au]:

Origin and evolution of spliceosomal introns. Rogozin IB et al. Biol Direct. (2012)

Evolutionary and biomedical insights from the rhesus macaque genome. Rhesus Macaque Genome Sequencing and Analysis Consortium. et al. Science. (2007)

Splice Sites Seldom Slide: Intron Evolution in Oomycetes. Sêton Bocco S et al. Genome Biol Evol. (2016)

Search results

Items: 25

1.

Splice Sites Seldom Slide: Intron Evolution in Oomycetes.

Sêton Bocco S, Csűrös M.

Genome Biol Evol. 2016 Aug 25;8(8):2340-50. doi: 10.1093/gbe/evw157.

2.

Non-identifiability of identity coefficients at biallelic loci.

Csűrös M.

Theor Popul Biol. 2014 Mar;92:22-9. doi: 10.1016/j.tpb.2013.11.001. Epub 2013 Nov 21.

PMID:
24269334
3.

Evolution of divergent life history strategies in marine alphaproteobacteria.

Luo H, Csuros M, Hughes AL, Moran MA.

MBio. 2013 Jul 9;4(4). pii: e00373-13. doi: 10.1128/mBio.00373-13.

4.

Joint genotype inference with germline and somatic mutations.

Bareke E, Saillour V, Spinella JF, Vidal R, Healy J, Sinnett D, Csűrös M.

BMC Bioinformatics. 2013;14 Suppl 5:S3. doi: 10.1186/1471-2105-14-S5-S3. Epub 2013 Apr 10.

5.

Whence genes in pieces: reconstruction of the exon-intron gene structures of the last eukaryotic common ancestor and other ancestral eukaryotes.

Koonin EV, Csuros M, Rogozin IB.

Wiley Interdiscip Rev RNA. 2013 Jan-Feb;4(1):93-105. doi: 10.1002/wrna.1143. Epub 2012 Nov 8. Review.

PMID:
23139082
6.

Origin and evolution of spliceosomal introns.

Rogozin IB, Carmel L, Csuros M, Koonin EV.

Biol Direct. 2012 Apr 16;7:11. doi: 10.1186/1745-6150-7-11. Review.

7.

A detailed history of intron-rich eukaryotic ancestors inferred from a global survey of 100 complete genomes.

Csuros M, Rogozin IB, Koonin EV.

PLoS Comput Biol. 2011 Sep;7(9):e1002150. doi: 10.1371/journal.pcbi.1002150. Epub 2011 Sep 15.

8.

A late origin of the extant eukaryotic diversity: divergence time estimates using rare genomic changes.

Chernikova D, Motamedi S, Csürös M, Koonin EV, Rogozin IB.

Biol Direct. 2011 May 19;6:26. doi: 10.1186/1745-6150-6-26.

9.

Count: evolutionary analysis of phylogenetic profiles with parsimony and likelihood.

Csurös M.

Bioinformatics. 2010 Aug 1;26(15):1910-2. doi: 10.1093/bioinformatics/btq315. Epub 2010 Jun 15.

PMID:
20551134
10.

Streamlining and large ancestral genomes in Archaea inferred with a phylogenetic birth-and-death model.

Csurös M, Miklós I.

Mol Biol Evol. 2009 Sep;26(9):2087-95. doi: 10.1093/molbev/msp123. Epub 2009 Jun 30.

11.
12.

Malin: maximum likelihood analysis of intron evolution in eukaryotes.

Csurös M.

Bioinformatics. 2008 Jul 1;24(13):1538-9. doi: 10.1093/bioinformatics/btn226. Epub 2008 May 12.

13.

Homoplasy in genome-wide analysis of rare amino acid replacements: the molecular-evolutionary basis for Vavilov's law of homologous series.

Rogozin IB, Thomson K, Csürös M, Carmel L, Koonin EV.

Biol Direct. 2008 Mar 17;3:7. doi: 10.1186/1745-6150-3-7.

14.

Extremely intron-rich genes in the alveolate ancestors inferred with a flexible maximum-likelihood approach.

Csurös M, Rogozin IB, Koonin EV.

Mol Biol Evol. 2008 May;25(5):903-11. doi: 10.1093/molbev/msn039. Epub 2008 Feb 21.

PMID:
18296415
15.

Reconsidering the significance of genomic word frequencies.

Csurös M, Noé L, Kucherov G.

Trends Genet. 2007 Nov;23(11):543-6. Epub 2007 Oct 26.

PMID:
17964682
16.

In search of lost introns.

Csurös M, Holey JA, Rogozin IB.

Bioinformatics. 2007 Jul 1;23(13):i87-96.

PMID:
17646350
17.

Evolutionary and biomedical insights from the rhesus macaque genome.

Rhesus Macaque Genome Sequencing and Analysis Consortium, Gibbs RA, Rogers J, Katze MG, Bumgarner R, Weinstock GM, Mardis ER, Remington KA, Strausberg RL, Venter JC, Wilson RK, Batzer MA, Bustamante CD, Eichler EE, Hahn MW, Hardison RC, Makova KD, Miller W, Milosavljevic A, Palermo RE, Siepel A, Sikela JM, Attaway T, Bell S, Bernard KE, Buhay CJ, Chandrabose MN, Dao M, Davis C, Delehaunty KD, Ding Y, Dinh HH, Dugan-Rocha S, Fulton LA, Gabisi RA, Garner TT, Godfrey J, Hawes AC, Hernandez J, Hines S, Holder M, Hume J, Jhangiani SN, Joshi V, Khan ZM, Kirkness EF, Cree A, Fowler RG, Lee S, Lewis LR, Li Z, Liu YS, Moore SM, Muzny D, Nazareth LV, Ngo DN, Okwuonu GO, Pai G, Parker D, Paul HA, Pfannkoch C, Pohl CS, Rogers YH, Ruiz SJ, Sabo A, Santibanez J, Schneider BW, Smith SM, Sodergren E, Svatek AF, Utterback TR, Vattathil S, Warren W, White CS, Chinwalla AT, Feng Y, Halpern AL, Hillier LW, Huang X, Minx P, Nelson JO, Pepin KH, Qin X, Sutton GG, Venter E, Walenz BP, Wallis JW, Worley KC, Yang SP, Jones SM, Marra MA, Rocchi M, Schein JE, Baertsch R, Clarke L, Csürös M, Glasscock J, Harris RA, Havlak P, Jackson AR, Jiang H, Liu Y, Messina DN, Shen Y, Song HX, Wylie T, Zhang L, Birney E, Han K, Konkel MK, Lee J, Smit AF, Ullmer B, Wang H, Xing J, Burhans R, Cheng Z, Karro JE, Ma J, Raney B, She X, Cox MJ, Demuth JP, Dumas LJ, Han SG, Hopkins J, Karimpour-Fard A, Kim YH, Pollack JR, Vinar T, Addo-Quaye C, Degenhardt J, Denby A, Hubisz MJ, Indap A, Kosiol C, Lahn BT, Lawson HA, Marklein A, Nielsen R, Vallender EJ, Clark AG, Ferguson B, Hernandez RD, Hirani K, Kehrer-Sawatzki H, Kolb J, Patil S, Pu LL, Ren Y, Smith DG, Wheeler DA, Schenck I, Ball EV, Chen R, Cooper DN, Giardine B, Hsu F, Kent WJ, Lesk A, Nelson DL, O'brien WE, Prüfer K, Stenson PD, Wallace JC, Ke H, Liu XM, Wang P, Xiang AP, Yang F, Barber GP, Haussler D, Karolchik D, Kern AD, Kuhn RM, Smith KE, Zwieg AS.

Science. 2007 Apr 13;316(5822):222-34.

18.

A glimpse of a putative pre-intron phase of eukaryotic evolution.

Sverdlov AV, Csuros M, Rogozin IB, Koonin EV.

Trends Genet. 2007 Mar;23(3):105-8. Epub 2007 Jan 19.

PMID:
17239982
19.

Maximum-scoring segment sets.

Csurös M.

IEEE/ACM Trans Comput Biol Bioinform. 2004 Oct-Dec;1(4):139-50.

PMID:
17051696
20.

On the estimation of intron evolution.

Csurös M.

PLoS Comput Biol. 2006 Jul 28;2(7):e84; author reply e83. No abstract available.

21.

Statistical alignment of retropseudogenes and their functional paralogs.

Csurös M, Miklós I.

Mol Biol Evol. 2005 Dec;22(12):2457-71. Epub 2005 Aug 17.

PMID:
16107591
22.

Clone-array pooled shotgun mapping and sequencing: design and analysis of experiments.

Csürös M, Li B, Milosavljevic A.

Genome Inform. 2003;14:186-95.

PMID:
15706533
23.

Pooled Genomic Indexing (PGI): analysis and design of experiments.

Csurös M, Milosavljevic A.

J Comput Biol. 2004;11(5):1001-21.

PMID:
15700414
24.

Pooled genomic indexing of rhesus macaque.

Milosavljevic A, Harris RA, Sodergren EJ, Jackson AR, Kalafus KJ, Hodgson A, Cree A, Dai W, Csuros M, Zhu B, de Jong PJ, Weinstock GM, Gibbs RA.

Genome Res. 2005 Feb;15(2):292-301.

25.

Fast recovery of evolutionary trees with thousands of nodes.

Csurös M.

J Comput Biol. 2002;9(2):277-97.

PMID:
12015882

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