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Items: 41

1.

Lexis and Grammar of Mitochondrial RNA Processing in Trypanosomes.

Aphasizheva I, Alfonzo J, Carnes J, Cestari I, Cruz-Reyes J, Göringer HU, Hajduk S, Lukeš J, Madison-Antenucci S, Maslov DA, McDermott SM, Ochsenreiter T, Read LK, Salavati R, Schnaufer A, Schneider A, Simpson L, Stuart K, Yurchenko V, Zhou ZH, Zíková A, Zhang L, Zimmer S, Aphasizhev R.

Trends Parasitol. 2020 Apr;36(4):337-355. doi: 10.1016/j.pt.2020.01.006. Epub 2020 Feb 28. Review.

2.

Peptidomimetic Vinyl Heterocyclic Inhibitors of Cruzain Effect Antitrypanosomal Activity.

Chenna BC, Li L, Mellott DM, Zhai X, Siqueira-Neto JL, Calvet Alvarez C, Bernatchez JA, Desormeaux E, Alvarez Hernandez E, Gomez J, McKerrow JH, Cruz-Reyes J, Meek TD.

J Med Chem. 2020 Mar 26;63(6):3298-3316. doi: 10.1021/acs.jmedchem.9b02078. Epub 2020 Mar 17.

PMID:
32125159
3.

Protein features for assembly of the RNA editing helicase 2 subcomplex (REH2C) in Trypanosome holo-editosomes.

Kumar V, Doharey PK, Gulati S, Meehan J, Martinez MG, Hughes K, Mooers BHM, Cruz-Reyes J.

PLoS One. 2019 Apr 29;14(4):e0211525. doi: 10.1371/journal.pone.0211525. eCollection 2019.

4.

Dynamic RNA holo-editosomes with subcomplex variants: Insights into the control of trypanosome editing.

Cruz-Reyes J, Mooers BHM, Doharey PK, Meehan J, Gulati S.

Wiley Interdiscip Rev RNA. 2018 Nov;9(6):e1502. doi: 10.1002/wrna.1502. Epub 2018 Aug 12. Review.

5.

DEAH-RHA helicase•Znf cofactor systems in kinetoplastid RNA editing and evolutionarily distant RNA processes.

Cruz-Reyes J, Mooers BH, Abu-Adas Z, Kumar V, Gulati S.

RNA Dis. 2016;3(2). pii: e1336. Epub 2016 Jun 6.

6.

REH2C Helicase and GRBC Subcomplexes May Base Pair through mRNA and Small Guide RNA in Kinetoplastid Editosomes.

Kumar V, Madina BR, Gulati S, Vashisht AA, Kanyumbu C, Pieters B, Shakir A, Wohlschlegel JA, Read LK, Mooers BH, Cruz-Reyes J.

J Biol Chem. 2016 Mar 11;291(11):5753-64. doi: 10.1074/jbc.M115.708164. Epub 2016 Jan 14.

7.

Native Variants of the MRB1 Complex Exhibit Specialized Functions in Kinetoplastid RNA Editing.

Madina BR, Kumar V, Mooers BH, Cruz-Reyes J.

PLoS One. 2015 Apr 30;10(4):e0123441. doi: 10.1371/journal.pone.0123441. eCollection 2015.

8.

Native mitochondrial RNA-binding complexes in kinetoplastid RNA editing differ in guide RNA composition.

Madina BR, Kumar V, Metz R, Mooers BH, Bundschuh R, Cruz-Reyes J.

RNA. 2014 Jul;20(7):1142-52. doi: 10.1261/rna.044495.114. Epub 2014 May 27.

9.

Guide RNA biogenesis involves a novel RNase III family endoribonuclease in Trypanosoma brucei.

Madina BR, Kuppan G, Vashisht AA, Liang YH, Downey KM, Wohlschlegel JA, Ji X, Sze SH, Sacchettini JC, Read LK, Cruz-Reyes J.

RNA. 2011 Oct;17(10):1821-30. doi: 10.1261/rna.2815911. Epub 2011 Aug 2.

10.

The impact of mRNA structure on guide RNA targeting in kinetoplastid RNA editing.

Reifur L, Yu LE, Cruz-Reyes J, Vanhartesvelt M, Koslowsky DJ.

PLoS One. 2010 Aug 17;5(8):e12235. doi: 10.1371/journal.pone.0012235.

11.

Complicated diverticular colon disease in patients younger than 35 years: report of two cases and literature review.

Rodríguez Wong U, Santamaría Aguirre JR, Cruz Reyes JM, García Alvarez J.

Cir Cir. 2010 Mar-Apr;78(2):167-71. Review. English, Spanish.

PMID:
20478120
12.

Guide to the nomenclature of kinetoplastid RNA editing: a proposal.

Simpson L, Aphasizhev R, Lukes J, Cruz-Reyes J.

Protist. 2010 Jan;161(1):2-6. doi: 10.1016/j.protis.2009.10.001. Epub 2009 Nov 27. No abstract available.

13.

REH2 RNA helicase in kinetoplastid mitochondria: ribonucleoprotein complexes and essential motifs for unwinding and guide RNA (gRNA) binding.

Hernandez A, Madina BR, Ro K, Wohlschlegel JA, Willard B, Kinter MT, Cruz-Reyes J.

J Biol Chem. 2010 Jan 8;285(2):1220-8. doi: 10.1074/jbc.M109.051862. Epub 2009 Oct 22.

14.

[Postobstetric rectovaginal fistula: surgical treatment using endorectal advancement flap].

Rodríguez-Wong U, Cruz-Reyes JM, Santamaría-Aguirre JR, García-Alvarez J.

Cir Cir. 2009 May-Jun;77(3):201-5. Spanish.

PMID:
19671272
15.

Determinants for association and guide RNA-directed endonuclease cleavage by purified RNA editing complexes from Trypanosoma brucei.

Hernandez A, Panigrahi A, Cifuentes-Rojas C, Sacharidou A, Stuart K, Cruz-Reyes J.

J Mol Biol. 2008 Aug 1;381(1):35-48. doi: 10.1016/j.jmb.2008.05.003. Epub 2008 May 8.

16.

Trypanosoma brucei RNA editing: coupled cycles of U deletion reveal processive activity of the editing complex.

Alatortsev VS, Cruz-Reyes J, Zhelonkina AG, Sollner-Webb B.

Mol Cell Biol. 2008 Apr;28(7):2437-45. doi: 10.1128/MCB.01886-07. Epub 2008 Jan 28.

17.

RNA-protein interactions in assembled editing complexes in trypanosomes.

Cruz-Reyes J.

Methods Enzymol. 2007;424:107-25.

PMID:
17662838
18.

Substrate determinants for RNA editing and editing complex interactions at a site for full-round U insertion.

Cifuentes-Rojas C, Pavia P, Hernandez A, Osterwisch D, Puerta C, Cruz-Reyes J.

J Biol Chem. 2007 Feb 16;282(7):4265-76. Epub 2006 Dec 7.

19.

Preferential interaction of a 25kDa protein with an A6 pre-mRNA substrate for RNA editing in Trypanosoma brucei.

Halbig K, Sacharidou A, De Nova-Ocampo M, Cruz-Reyes J.

Int J Parasitol. 2006 Oct;36(12):1295-304. Epub 2006 Jun 19.

PMID:
16860325
20.

RBP16 stimulates trypanosome RNA editing in vitro at an early step in the editing reaction.

Miller MM, Halbig K, Cruz-Reyes J, Read LK.

RNA. 2006 Jul;12(7):1292-303. Epub 2006 May 11.

21.

RNA editing complex interactions with a site for full-round U deletion in Trypanosoma brucei.

Sacharidou A, Cifuentes-Rojas C, Halbig K, Hernandez A, Dangott LJ, De Nova-Ocampo M, Cruz-Reyes J.

RNA. 2006 Jul;12(7):1219-28. Epub 2006 May 11.

22.

T. brucei RNA editing: action of the U-insertional TUTase within a U-deletion cycle.

Zhelonkina AG, O'Hearn SF, Law JA, Cruz-Reyes J, Huang CE, Alatortsev VS, Sollner-Webb B.

RNA. 2006 Mar;12(3):476-87.

23.

Minimal pre-mRNA substrates with natural and converted sites for full-round U insertion and U deletion RNA editing in trypanosomes.

Cifuentes-Rojas C, Halbig K, Sacharidou A, De Nova-Ocampo M, Cruz-Reyes J.

Nucleic Acids Res. 2005 Nov 23;33(20):6610-20. Print 2005.

24.

Complete cycles of bloodstream trypanosome RNA editing in vitro.

Halbig K, De Nova-Ocampo M, Cruz-Reyes J.

RNA. 2004 Jun;10(6):914-20.

25.

Distinct functions of two RNA ligases in active Trypanosoma brucei RNA editing complexes.

Cruz-Reyes J, Zhelonkina AG, Huang CE, Sollner-Webb B.

Mol Cell Biol. 2002 Jul;22(13):4652-60.

26.

Direct sizing of RNA fragments using RNase-generated standards.

Sollner-Webb B, Cruz-Reyes J, Rusché LN.

Methods Enzymol. 2001;342:378-83. No abstract available.

PMID:
11586910
27.

Ribonuclease activities of trypanosome RNA editing complex directed to cleave specifically at a chosen site.

Sollner-Webb B, Rusché LN, Cruz-Reyes J.

Methods Enzymol. 2001;341:154-74. No abstract available.

PMID:
11582776
28.

Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair.

Huang CE, Cruz-Reyes J, Zhelonkina AG, O'Hearn S, Wirtz E, Sollner-Webb B.

EMBO J. 2001 Sep 3;20(17):4694-703.

29.

Trypanosome RNA editing: simple guide RNA features enhance U deletion 100-fold.

Cruz-Reyes J, Zhelonkina A, Rusche L, Sollner-Webb B.

Mol Cell Biol. 2001 Feb;21(3):884-92.

30.
31.

T. brucei RNA editing: adenosine nucleotides inversely affect U-deletion and U-insertion reactions at mRNA cleavage.

Cruz-Reyes J, Rusché LN, Piller KJ, Sollner-Webb B.

Mol Cell. 1998 Feb;1(3):401-9.

32.
33.

Purification of a functional enzymatic editing complex from Trypanosoma brucei mitochondria.

Rusché LN, Cruz-Reyes J, Piller KJ, Sollner-Webb B.

EMBO J. 1997 Jul 1;16(13):4069-81.

34.
35.
36.

A novel transcribed repeat element from Entamoeba histolytica.

Cruz-Reyes J, ur-Rehman T, Spice WM, Ackers JP.

Gene. 1995 Dec 1;166(1):183-4.

PMID:
8529889
37.
38.

Molecular and cell biology of opportunistic infections in AIDS. Entamoeba histolytica.

Spice WM, Cruz-Reyes JA, Ackers JP.

Mol Cell Biol Hum Dis Ser. 1993;2:95-137. Review. No abstract available.

PMID:
8261181
39.

Ribosomal DNA sequences in the differentiation of pathogenic and non-pathogenic isolates of Entamoeba histolytica.

Cruz-Reyes JA, Spice WM, Rehman T, Gisborne E, Ackers JP.

Parasitology. 1992 Apr;104 ( Pt 2):239-46.

PMID:
1594290
40.

A DNA probe specific to pathogenic Entamoeba histolytica.

Cruz-Reyes JA, Ackers JP.

Arch Med Res. 1992;23(2):271-5.

PMID:
1340313
41.

[Rec-A-independent molecular rearrangements between R plasmids of the FII incompatibility group].

Cruz Reyes J, Gómez Eichelmann MC.

Rev Latinoam Microbiol. 1984 Oct-Dec;26(4):335-45. Spanish. No abstract available.

PMID:
6097978

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