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Items: 1 to 50 of 83

1.

Percolation models of pathogen spillover.

Washburne AD, Crowley DE, Becker DJ, Manlove KR, Childs ML, Plowright RK.

Philos Trans R Soc Lond B Biol Sci. 2019 Sep 30;374(1782):20180331. doi: 10.1098/rstb.2018.0331. Epub 2019 Aug 12.

PMID:
31401950
2.

Prioritizing surveillance of Nipah virus in India.

Plowright RK, Becker DJ, Crowley DE, Washburne AD, Huang T, Nameer PO, Gurley ES, Han BA.

PLoS Negl Trop Dis. 2019 Jun 27;13(6):e0007393. doi: 10.1371/journal.pntd.0007393. eCollection 2019 Jun.

3.

Taxonomic patterns in the zoonotic potential of mammalian viruses.

Washburne AD, Crowley DE, Becker DJ, Olival KJ, Taylor M, Munster VJ, Plowright RK.

PeerJ. 2018 Nov 28;6:e5979. doi: 10.7717/peerj.5979. eCollection 2018.

4.

Changing resource landscapes and spillover of henipaviruses.

Kessler MK, Becker DJ, Peel AJ, Justice NV, Lunn T, Crowley DE, Jones DN, Eby P, Sánchez CA, Plowright RK.

Ann N Y Acad Sci. 2018 Oct;1429(1):78-99. doi: 10.1111/nyas.13910. Epub 2018 Aug 23. Review.

5.

Short-term biochar manipulation of microbial nitrogen transformation in wheat rhizosphere of a metal contaminated Inceptisol from North China plain.

Zhou H, Wang P, Chen, Shi G, Cheng K, Bian R, Liu X, Zhang X, Zheng J, Crowley DE, van Zwieten L, Li L, Pan G.

Sci Total Environ. 2018 Nov 1;640-641:1287-1296. doi: 10.1016/j.scitotenv.2018.06.009. Epub 2018 Jun 7.

PMID:
30021295
6.

Biochar effects on uptake of cadmium and lead by wheat in relation to annual precipitation: a 3-year field study.

Sui F, Zuo J, Chen, Li L, Pan G, Crowley DE.

Environ Sci Pollut Res Int. 2018 Feb;25(4):3368-3377. doi: 10.1007/s11356-017-0652-4. Epub 2017 Nov 18.

PMID:
29151186
7.

Cell wall canals formed upon growth of Candida maltosa in the presence of hexadecane are associated with polyphosphates.

Zvonarev AN, Crowley DE, Ryazanova LP, Lichko LP, Rusakova TG, Kulakovskaya TV, Dmitriev VV.

FEMS Yeast Res. 2017 May 1;17(3). doi: 10.1093/femsyr/fox026.

PMID:
28475763
8.

Synergistic use of biochar, compost and plant growth-promoting rhizobacteria for enhancing cucumber growth under water deficit conditions.

Nadeem SM, Imran M, Naveed M, Khan MY, Ahmad M, Zahir ZA, Crowley DE.

J Sci Food Agric. 2017 Dec;97(15):5139-5145. doi: 10.1002/jsfa.8393. Epub 2017 Jun 9.

PMID:
28436040
9.

The endophytic bacterium Serratia sp. PW7 degrades pyrene in wheat.

Zhu X, Wang W, Crowley DE, Sun K, Hao S, Waigi MG, Gao Y.

Environ Sci Pollut Res Int. 2017 Mar;24(7):6648-6656. doi: 10.1007/s11356-016-8345-y. Epub 2017 Jan 12.

PMID:
28083742
10.

Phyllosphere Metaproteomes of Trees from the Brazilian Atlantic Forest Show High Levels of Functional Redundancy.

Lambais MR, Barrera SE, Santos EC, Crowley DE, Jumpponen A.

Microb Ecol. 2017 Jan;73(1):123-134. doi: 10.1007/s00248-016-0878-6. Epub 2016 Nov 16.

PMID:
27853840
11.

Bacterial diversity and composition in major fresh produce growing soils affected by physiochemical properties and geographic locations.

Ma J, Ibekwe AM, Yang CH, Crowley DE.

Sci Total Environ. 2016 Sep 1;563-564:199-209. doi: 10.1016/j.scitotenv.2016.04.122. Epub 2016 Apr 30.

PMID:
27135583
12.

Relationship between in vitro characterization and comparative efficacy of plant growth-promoting rhizobacteria for improving cucumber salt tolerance.

Nadeem SM, Ahmad M, Naveed M, Imran M, Zahir ZA, Crowley DE.

Arch Microbiol. 2016 May;198(4):379-87. doi: 10.1007/s00203-016-1197-5. Epub 2016 Feb 9.

PMID:
26860842
13.

Modifications of the cell wall of yeasts grown on hexadecane and under starvation conditions.

Dmitriev VV, Crowley DE, Zvonarev AN, Rusakova TG, Negri MC, Kolesnikova SA.

Yeast. 2016 Feb;33(2):55-62. doi: 10.1002/yea.3140. Epub 2015 Dec 1.

14.

Yeast extract promotes decolorization of azo dyes by stimulating azoreductase activity in Shewanella sp. strain IFN4.

Imran M, Arshad M, Negm F, Khalid A, Shaharoona B, Hussain S, Mahmood Nadeem S, Crowley DE.

Ecotoxicol Environ Saf. 2016 Feb;124:42-49. doi: 10.1016/j.ecoenv.2015.09.041. Epub 2015 Oct 19.

PMID:
26454074
15.

Genome Sequence Analysis of the Naphthenic Acid Degrading and Metal Resistant Bacterium Cupriavidus gilardii CR3.

Wang X, Chen M, Xiao J, Hao L, Crowley DE, Zhang Z, Yu J, Huang N, Huo M, Wu J.

PLoS One. 2015 Aug 24;10(8):e0132881. doi: 10.1371/journal.pone.0132881. eCollection 2015.

16.

Decolorization of Reactive Black-5 by Shewanella sp. in the Presence of Metal Ions and Salts.

Imran M, Arshad M, Khalid A, Hussain S, Mumtaz MW, Crowley DE.

Water Environ Res. 2015 Jul;87(7):579-86. doi: 10.2175/106143014X14062131178114.

PMID:
26163493
17.

Effects of cowpea (Vigna unguiculata) root mucilage on microbial community response and capacity for phenanthrene remediation.

Sun R, Belcher RW, Liang J, Wang L, Thater B, Crowley DE, Wei G.

J Environ Sci (China). 2015 Jul 1;33:45-59. doi: 10.1016/j.jes.2014.11.013. Epub 2015 Apr 13.

PMID:
26141877
18.

The stability of textile azo dyes in soil and their impact on microbial phospholipid fatty acid profiles.

Imran M, Shaharoona B, Crowley DE, Khalid A, Hussain S, Arshad M.

Ecotoxicol Environ Saf. 2015 Oct;120:163-8. doi: 10.1016/j.ecoenv.2015.06.004. Epub 2015 Jun 11.

PMID:
26074308
19.

Detoxification of azo dyes by bacterial oxidoreductase enzymes.

Mahmood S, Khalid A, Arshad M, Mahmood T, Crowley DE.

Crit Rev Biotechnol. 2016 Aug;36(4):639-51. doi: 10.3109/07388551.2015.1004518. Epub 2015 Feb 10. Review.

PMID:
25665634
20.

Study of phenanthrene utilizing bacterial consortia associated with cowpea (Vigna unguiculata) root nodules.

Sun R, Crowley DE, Wei G.

World J Microbiol Biotechnol. 2015 Feb;31(2):415-33. doi: 10.1007/s11274-014-1796-8. Epub 2015 Jan 20.

PMID:
25601371
21.

Topological data analysis of Escherichia coli O157:H7 and non-O157 survival in soils.

Ibekwe AM, Ma J, Crowley DE, Yang CH, Johnson AM, Petrossian TC, Lum PY.

Front Cell Infect Microbiol. 2014 Sep 5;4:122. doi: 10.3389/fcimb.2014.00122. eCollection 2014.

22.

Persistence of Escherichia coli O157 and non-O157 strains in agricultural soils.

Ma J, Mark Ibekwe A, Crowley DE, Yang CH.

Sci Total Environ. 2014 Aug 15;490:822-9. doi: 10.1016/j.scitotenv.2014.05.069. Epub 2014 Jun 5.

PMID:
24907617
23.

Bacterial community assemblages associated with the phyllosphere, dermosphere, and rhizosphere of tree species of the Atlantic forest are host taxon dependent.

Lambais MR, Lucheta AR, Crowley DE.

Microb Ecol. 2014 Oct;68(3):567-74. doi: 10.1007/s00248-014-0433-2. Epub 2014 Jun 3.

PMID:
24889284
24.

Influence of bacterial communities based on 454-pyrosequencing on the survival of Escherichia coli O157:H7 in soils.

Ma J, Ibekwe AM, Yang CH, Crowley DE.

FEMS Microbiol Ecol. 2013 Jun;84(3):542-54. doi: 10.1111/1574-6941.12083. Epub 2013 Feb 26.

25.

Draft genome sequence of Rahnella aquatilis strain HX2, a plant growth-promoting rhizobacterium isolated from vineyard soil in Beijing, China.

Guo Y, Jiao Z, Li L, Wu D, Crowley DE, Wang Y, Wu W.

J Bacteriol. 2012 Dec;194(23):6646-7. doi: 10.1128/JB.01769-12.

26.

Persistence of Escherichia coli O157:H7 in major leafy green producing soils.

Ma J, Ibekwe AM, Crowley DE, Yang CH.

Environ Sci Technol. 2012 Nov 6;46(21):12154-61. doi: 10.1021/es302738z. Epub 2012 Oct 18.

PMID:
23030401
27.

Phytate addition to soil induces changes in the abundance and expression of Bacillus β-propeller phytase genes in the rhizosphere.

Jorquera MA, Saavedra N, Maruyama F, Richardson AE, Crowley DE, del C Catrilaf R, Henriquez EJ, de la Luz Mora M.

FEMS Microbiol Ecol. 2013 Feb;83(2):352-60. doi: 10.1111/j.1574-6941.2012.01480.x. Epub 2012 Sep 19.

28.

Isolation of biosurfactant-producing bacteria from the Rancho La Brea Tar Pits.

Belcher RW, Huynh KV, Hoang TV, Crowley DE.

World J Microbiol Biotechnol. 2012 Dec;28(12):3261-7. doi: 10.1007/s11274-012-1137-8. Epub 2012 Aug 1.

PMID:
22851192
29.

Assimilable organic carbon (AOC) in soil water extracts using Vibrio harveyi BB721 and its implication for microbial biomass.

Ma J, Ibekwe AM, Wang H, Xu J, Leddy M, Yang CH, Crowley DE.

PLoS One. 2012;7(4):e28519. doi: 10.1371/journal.pone.0028519. Epub 2012 May 4.

30.

Plant growth-promoting rhizobacteria associated with ancient clones of creosote bush (Larrea tridentata).

Jorquera MA, Shaharoona B, Nadeem SM, de la Luz Mora M, Crowley DE.

Microb Ecol. 2012 Nov;64(4):1008-17. doi: 10.1007/s00248-012-0071-5. Epub 2012 May 26.

PMID:
22639075
31.

Computational identification and analysis of the key biosorbent characteristics for the biosorption process of reactive black 5 onto fungal biomass.

Yang YY, Li ZL, Wang G, Zhao XP, Crowley DE, Zhao YH.

PLoS One. 2012;7(3):e33551. doi: 10.1371/journal.pone.0033551. Epub 2012 Mar 19.

32.

Biosorption of the metal-complex dye Acid Black 172 by live and heat-treated biomass of Pseudomonas sp. strain DY1: kinetics and sorption mechanisms.

Du LN, Wang B, Li G, Wang S, Crowley DE, Zhao YH.

J Hazard Mater. 2012 Feb 29;205-206:47-54. doi: 10.1016/j.jhazmat.2011.12.001. Epub 2011 Dec 8.

PMID:
22236947
33.

Persistence of Escherichia coli O157:H7 and its mutants in soils.

Ma J, Ibekwe AM, Yi X, Wang H, Yamazaki A, Crowley DE, Yang CH.

PLoS One. 2011;6(8):e23191. doi: 10.1371/journal.pone.0023191. Epub 2011 Aug 3.

34.

Isolation and characterization of pyrene metabolizing microbial consortia from the plant rhizoplane.

Balcom IN, Crowley DE.

Int J Phytoremediation. 2010 Aug;12(6):599-615. doi: 10.1080/15226510903390437.

PMID:
21166284
35.

Identification of β-propeller phytase-encoding genes in culturable Paenibacillus and Bacillus spp. from the rhizosphere of pasture plants on volcanic soils.

Jorquera MA, Crowley DE, Marschner P, Greiner R, Fernández MT, Romero D, Menezes-Blackburn D, De La Luz Mora M.

FEMS Microbiol Ecol. 2011 Jan;75(1):163-72. doi: 10.1111/j.1574-6941.2010.00995.x. Epub 2010 Nov 12.

36.

Closing the loop on organic waste management: biochar for agricultural land application and climate change mitigation.

Navia R, Crowley DE.

Waste Manag Res. 2010 Jun;28(6):479-80. doi: 10.1177/0734242X10370928. No abstract available.

PMID:
20507863
37.

Nested PCR bias: a case study of Pseudomonas spp. in soil microcosms.

Park JW, Crowley DE.

J Environ Monit. 2010 Apr;12(4):985-8. doi: 10.1039/b924160d. Epub 2010 Feb 16.

PMID:
20383382
38.

Pyrene effects on rhizoplane bacterial communities.

Balcom IN, Crowley DE.

Int J Phytoremediation. 2009 Sep;11(7):609-22. doi: 10.1080/15226510902787146.

PMID:
19810358
39.

Biodegradation potential of pure and mixed bacterial cultures for removal of 4-nitroaniline from textile dye wastewater.

Khalid A, Arshad M, Crowley DE.

Water Res. 2009 Mar;43(4):1110-6. doi: 10.1016/j.watres.2008.11.045. Epub 2008 Dec 11.

PMID:
19114284
40.

Decolorization of azo dyes by Shewanella sp. under saline conditions.

Khalid A, Arshad M, Crowley DE.

Appl Microbiol Biotechnol. 2008 Jul;79(6):1053-9. doi: 10.1007/s00253-008-1498-y. Epub 2008 May 7.

PMID:
18461315
41.

Accelerated decolorization of structurally different azo dyes by newly isolated bacterial strains.

Khalid A, Arshad M, Crowley DE.

Appl Microbiol Biotechnol. 2008 Feb;78(2):361-9. Epub 2007 Dec 15.

PMID:
18084755
42.

Biodegradation of diphenyl ether and transformation of selected brominated congeners by Sphingomonas sp. PH-07.

Kim YM, Nam IH, Murugesan K, Schmidt S, Crowley DE, Chang YS.

Appl Microbiol Biotechnol. 2007 Nov;77(1):187-94. Epub 2007 Aug 11.

PMID:
17694301
43.

Biostimulation of PAH degradation with plants containing high concentrations of linoleic acid.

Yi H, Crowley DE.

Environ Sci Technol. 2007 Jun 15;41(12):4382-8.

PMID:
17626440
44.

Microbial diversity in natural asphalts of the Rancho La Brea Tar Pits.

Kim JS, Crowley DE.

Appl Environ Microbiol. 2007 Jul;73(14):4579-91. Epub 2007 Apr 6.

45.

Contribution of ethylamine degrading bacteria to atrazine degradation in soils.

Smith D, Crowley DE.

FEMS Microbiol Ecol. 2006 Nov;58(2):271-7.

46.

Bacterial diversity in tree canopies of the Atlantic forest.

Lambais MR, Crowley DE, Cury JC, Büll RC, Rodrigues RR.

Science. 2006 Jun 30;312(5782):1917.

47.

Dynamic changes in nahAc gene copy numbers during degradation of naphthalene in PAH-contaminated soils.

Park JW, Crowley DE.

Appl Microbiol Biotechnol. 2006 Oct;72(6):1322-9. Epub 2006 Jun 28.

PMID:
16804694
48.

Molecular basis of a bacterial consortium: interspecies catabolism of atrazine.

de Souza ML, Newcombe D, Alvey S, Crowley DE, Hay A, Sadowsky MJ, Wackett LP.

Appl Environ Microbiol. 1998 Jan;64(1):178-84.

49.

Cooperative catabolic pathways within an atrazine-degrading enrichment culture isolated from soil.

Smith D, Alvey S, Crowley DE.

FEMS Microbiol Ecol. 2005 Jul 1;53(2):265-73. Epub 2005 Jan 19.

50.

Phylogenetic diversity of fluorescent pseudomonads in agricultural soils from Korea.

Kwon SW, Kim JS, Crowley DE, Lim CK.

Lett Appl Microbiol. 2005;41(5):417-23.

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