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Items: 36

1.

A multi-amplicon 16S rRNA sequencing and analysis method for improved taxonomic profiling of bacterial communities.

Schriefer AE, Cliften PF, Hibberd MC, Sawyer C, Brown-Kennerly V, Burcea L, Klotz E, Crosby SD, Gordon JI, Head RD.

J Microbiol Methods. 2018 Nov;154:6-13. doi: 10.1016/j.mimet.2018.09.019. Epub 2018 Sep 29.

PMID:
30273610
2.

MicroRNA signature of central nervous system-infiltrating dendritic cells in an animal model of multiple sclerosis.

Hoye ML, Archambault AS, Gordon TM, Oetjen LK, Cain MD, Klein RS, Crosby SD, Kim BS, Miller TM, Wu GF.

Immunology. 2018 Sep;155(1):112-122. doi: 10.1111/imm.12934. Epub 2018 May 10.

PMID:
29749614
3.

Template-dependent multiple displacement amplification for profiling human circulating RNA.

Wang W, Ren Y, Lu Y, Xu Y, Crosby SD, Di Bisceglie AM, Fan X.

Biotechniques. 2017 Jul 1;63(1):21-27. doi: 10.2144/000114566.

4.

Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology.

Yu J, Cliften PF, Juehne TI, Sinnwell TM, Sawyer CS, Sharma M, Lutz A, Tycksen E, Johnson MR, Minton MR, Klotz ET, Schriefer AE, Yang W, Heinz ME, Crosby SD, Head RD.

BMC Genomics. 2015 Sep 18;16:710. doi: 10.1186/s12864-015-1913-6.

5.

Repetitive stimulation of autophagy-lysosome machinery by intermittent fasting preconditions the myocardium to ischemia-reperfusion injury.

Godar RJ, Ma X, Liu H, Murphy JT, Weinheimer CJ, Kovacs A, Crosby SD, Saftig P, Diwan A.

Autophagy. 2015;11(9):1537-60. doi: 10.1080/15548627.2015.1063768.

6.

School staff perspectives on the challenges and solutions to working with court-involved students.

Crosby SD, Day AG, Baroni BA, Somers CL.

J Sch Health. 2015 Jun;85(6):347-54. doi: 10.1111/josh.12261.

PMID:
25877431
7.

Enhanced sphingosine-1-phosphate receptor 2 expression underlies female CNS autoimmunity susceptibility.

Cruz-Orengo L, Daniels BP, Dorsey D, Basak SA, Grajales-Reyes JG, McCandless EE, Piccio L, Schmidt RE, Cross AH, Crosby SD, Klein RS.

J Clin Invest. 2014 Jun;124(6):2571-84. doi: 10.1172/JCI73408. Epub 2014 May 8.

8.

Validation of a next-generation sequencing assay for clinical molecular oncology.

Cottrell CE, Al-Kateb H, Bredemeyer AJ, Duncavage EJ, Spencer DH, Abel HJ, Lockwood CM, Hagemann IS, O'Guin SM, Burcea LC, Sawyer CS, Oschwald DM, Stratman JL, Sher DA, Johnson MR, Brown JT, Cliften PF, George B, McIntosh LD, Shrivastava S, Nguyen TT, Payton JE, Watson MA, Crosby SD, Head RD, Mitra RD, Nagarajan R, Kulkarni S, Seibert K, Virgin HW 4th, Milbrandt J, Pfeifer JD.

J Mol Diagn. 2014 Jan;16(1):89-105. doi: 10.1016/j.jmoldx.2013.10.002. Epub 2013 Nov 6.

9.

Global expression analysis of the yeast Lachancea (Saccharomyces) kluyveri reveals new URC genes involved in pyrimidine catabolism.

Andersson Rasmussen A, Kandasamy D, Beck H, Crosby SD, Björnberg O, Schnackerz KD, Piškur J.

Eukaryot Cell. 2014 Jan;13(1):31-42. doi: 10.1128/EC.00202-13. Epub 2013 Nov 1.

10.

Serum from humans on long-term calorie restriction enhances stress resistance in cell culture.

Omodei D, Licastro D, Salvatore F, Crosby SD, Fontana L.

Aging (Albany NY). 2013 Aug;5(8):599-606.

11.

Gene expression profiles in febrile children with defined viral and bacterial infection.

Hu X, Yu J, Crosby SD, Storch GA.

Proc Natl Acad Sci U S A. 2013 Jul 30;110(31):12792-7. doi: 10.1073/pnas.1302968110. Epub 2013 Jul 15.

12.

Calorie restriction in humans inhibits the PI3K/AKT pathway and induces a younger transcription profile.

Mercken EM, Crosby SD, Lamming DW, JeBailey L, Krzysik-Walker S, Villareal DT, Capri M, Franceschi C, Zhang Y, Becker K, Sabatini DM, de Cabo R, Fontana L.

Aging Cell. 2013 Aug;12(4):645-51. doi: 10.1111/acel.12088. Epub 2013 Jun 5.

13.

Serum response factor controls transcriptional network regulating epidermal function and hair follicle morphogenesis.

Lin C, Hindes A, Burns CJ, Koppel AC, Kiss A, Yin Y, Ma L, Blumenberg M, Khnykin D, Jahnsen FL, Crosby SD, Ramanan N, Efimova T.

J Invest Dermatol. 2013 Mar;133(3):608-617. doi: 10.1038/jid.2012.378. Epub 2012 Nov 15.

14.

Effects of doxycycline on gene expression in Wolbachia and Brugia malayi adult female worms in vivo.

Rao RU, Huang Y, Abubucker S, Heinz M, Crosby SD, Mitreva M, Weil GJ.

J Biomed Sci. 2012 Feb 9;19:21. doi: 10.1186/1423-0127-19-21.

15.

Genome-Wide Identification and Quantification of cis- and trans-Regulated Genes Responding to Marek's Disease Virus Infection via Analysis of Allele-Specific Expression.

Maceachern S, Muir WM, Crosby SD, Cheng HH.

Front Genet. 2012 Jan 13;2:113. doi: 10.3389/fgene.2011.00113. eCollection 2011.

16.

GLUT10 is required for the development of the cardiovascular system and the notochord and connects mitochondrial function to TGFβ signaling.

Willaert A, Khatri S, Callewaert BL, Coucke PJ, Crosby SD, Lee JG, Davis EC, Shiva S, Tsang M, De Paepe A, Urban Z.

Hum Mol Genet. 2012 Mar 15;21(6):1248-59. doi: 10.1093/hmg/ddr555. Epub 2011 Nov 24.

17.

Transcriptional profiling of CD4 T cells identifies distinct subgroups of HIV-1 elite controllers.

Vigneault F, Woods M, Buzon MJ, Li C, Pereyra F, Crosby SD, Rychert J, Church G, Martinez-Picado J, Rosenberg ES, Telenti A, Yu XG, Lichterfeld M.

J Virol. 2011 Mar;85(6):3015-9. doi: 10.1128/JVI.01846-10. Epub 2010 Dec 22.

18.

Loss of Nix in Pdx1-deficient mice prevents apoptotic and necrotic β cell death and diabetes.

Fujimoto K, Ford EL, Tran H, Wice BM, Crosby SD, Dorn GW 2nd, Polonsky KS.

J Clin Invest. 2010 Nov;120(11):4031-9. doi: 10.1172/JCI44011. Epub 2010 Oct 11.

19.

Next-generation sequencing identifies the natural killer cell microRNA transcriptome.

Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER.

Genome Res. 2010 Nov;20(11):1590-604. doi: 10.1101/gr.107995.110. Epub 2010 Oct 8.

20.

Disruption of the clock components CLOCK and BMAL1 leads to hypoinsulinaemia and diabetes.

Marcheva B, Ramsey KM, Buhr ED, Kobayashi Y, Su H, Ko CH, Ivanova G, Omura C, Mo S, Vitaterna MH, Lopez JP, Philipson LH, Bradfield CA, Crosby SD, JeBailey L, Wang X, Takahashi JS, Bass J.

Nature. 2010 Jul 29;466(7306):627-31. doi: 10.1038/nature09253.

21.

SnoRNA microarray analysis reveals changes in H/ACA and C/D RNA levels caused by dyskerin ablation in mouse liver.

Ge J, Crosby SD, Heinz ME, Bessler M, Mason PJ.

Biochem J. 2010 Jul 1;429(1):33-41. doi: 10.1042/BJ20091898.

22.

Somatic mutations affect key pathways in lung adenocarcinoma.

Ding L, Getz G, Wheeler DA, Mardis ER, McLellan MD, Cibulskis K, Sougnez C, Greulich H, Muzny DM, Morgan MB, Fulton L, Fulton RS, Zhang Q, Wendl MC, Lawrence MS, Larson DE, Chen K, Dooling DJ, Sabo A, Hawes AC, Shen H, Jhangiani SN, Lewis LR, Hall O, Zhu Y, Mathew T, Ren Y, Yao J, Scherer SE, Clerc K, Metcalf GA, Ng B, Milosavljevic A, Gonzalez-Garay ML, Osborne JR, Meyer R, Shi X, Tang Y, Koboldt DC, Lin L, Abbott R, Miner TL, Pohl C, Fewell G, Haipek C, Schmidt H, Dunford-Shore BH, Kraja A, Crosby SD, Sawyer CS, Vickery T, Sander S, Robinson J, Winckler W, Baldwin J, Chirieac LR, Dutt A, Fennell T, Hanna M, Johnson BE, Onofrio RC, Thomas RK, Tonon G, Weir BA, Zhao X, Ziaugra L, Zody MC, Giordano T, Orringer MB, Roth JA, Spitz MR, Wistuba II, Ozenberger B, Good PJ, Chang AC, Beer DG, Watson MA, Ladanyi M, Broderick S, Yoshizawa A, Travis WD, Pao W, Province MA, Weinstock GM, Varmus HE, Gabriel SB, Lander ES, Gibbs RA, Meyerson M, Wilson RK.

Nature. 2008 Oct 23;455(7216):1069-75. doi: 10.1038/nature07423.

23.

'Calling Cards' method for high-throughput identification of targets of yeast DNA-binding proteins.

Wang H, Heinz ME, Crosby SD, Johnston M, Mitra RD.

Nat Protoc. 2008;3(10):1569-77. doi: 10.1038/nprot.2008.148.

PMID:
18802438
24.

Notch-deficient skin induces a lethal systemic B-lymphoproliferative disorder by secreting TSLP, a sentinel for epidermal integrity.

Demehri S, Liu Z, Lee J, Lin MH, Crosby SD, Roberts CJ, Grigsby PW, Miner JH, Farr AG, Kopan R.

PLoS Biol. 2008 May 27;6(5):e123. doi: 10.1371/journal.pbio.0060123.

25.

Herpes simplex virus virion host shutoff attenuates establishment of the antiviral state.

Pasieka TJ, Lu B, Crosby SD, Wylie KM, Morrison LA, Alexander DE, Menachery VD, Leib DA.

J Virol. 2008 Jun;82(11):5527-35. doi: 10.1128/JVI.02047-07. Epub 2008 Mar 26.

26.

Brugia malayi: whole genome amplification for genomic characterization of filarial parasites.

McNulty SN, Weil GJ, Heinz M, Crosby SD, Fischer PU.

Exp Parasitol. 2008 Jun;119(2):256-63. doi: 10.1016/j.exppara.2008.02.003. Epub 2008 Feb 19.

PMID:
18359019
27.

Fingerprint profile of alcohol-associated heart failure in human hearts.

Haddad GE, Saunders L, Carles M, Crosby SD, del Monte F, Macgillivray TE, Semigran MJ, Dec GW, Hajjar RJ, Doye AA, Glass R, El M, Gwathmey JK.

Alcohol Clin Exp Res. 2008 May;32(5):814-21. doi: 10.1111/j.1530-0277.2008.00628.x. Epub 2008 Mar 11.

PMID:
18336640
28.

Human cardiac-specific cDNA array for idiopathic dilated cardiomyopathy: sex-related differences.

Haddad GE, Saunders LJ, Crosby SD, Carles M, del Monte F, King K, Bristow MR, Spinale FG, Macgillivray TE, Semigran MJ, Dec GW, Williams SA, Hajjar RJ, Gwathmey JK.

Physiol Genomics. 2008 Apr 22;33(2):267-77. doi: 10.1152/physiolgenomics.00265.2007. Epub 2008 Feb 26.

PMID:
18303083
29.

Synthesis from caffeine of a mixed N-heterocyclic carbene-silver acetate complex active against resistant respiratory pathogens.

Kascatan-Nebioglu A, Melaiye A, Hindi K, Durmus S, Panzner MJ, Hogue LA, Mallett RJ, Hovis CE, Coughenour M, Crosby SD, Milsted A, Ely DL, Tessier CA, Cannon CL, Youngs WJ.

J Med Chem. 2006 Nov 16;49(23):6811-8.

PMID:
17154511
30.

RovA, a global regulator of Yersinia pestis, specifically required for bubonic plague.

Cathelyn JS, Crosby SD, Lathem WW, Goldman WE, Miller VL.

Proc Natl Acad Sci U S A. 2006 Sep 5;103(36):13514-9. Epub 2006 Aug 28.

31.

Progression of primary pneumonic plague: a mouse model of infection, pathology, and bacterial transcriptional activity.

Lathem WW, Crosby SD, Miller VL, Goldman WE.

Proc Natl Acad Sci U S A. 2005 Dec 6;102(49):17786-91. Epub 2005 Nov 23.

32.

Profiling of gender-regulated gene transcripts in the filarial nematode Brugia malayi by cDNA oligonucleotide array analysis.

Li BW, Rush AC, Crosby SD, Warren WC, Williams SA, Mitreva M, Weil GJ.

Mol Biochem Parasitol. 2005 Sep;143(1):49-57.

PMID:
15992941
33.

Neural-specific expression, genomic structure, and chromosomal localization of the gene encoding the zinc-finger transcription factor NGFI-C.

Crosby SD, Veile RA, Donis-Keller H, Baraban JM, Bhat RV, Simburger KS, Milbrandt J.

Proc Natl Acad Sci U S A. 1992 Jul 15;89(14):6663. No abstract available.

34.

Neural-specific expression, genomic structure, and chromosomal localization of the gene encoding the zinc-finger transcription factor NGFI-C.

Crosby SD, Veile RA, Donis-Keller H, Baraban JM, Bhat RV, Simburger KS, Milbrandt J.

Proc Natl Acad Sci U S A. 1992 May 15;89(10):4739-43. Erratum in: Proc Natl Acad Sci U S A. 1992 Jul 15;89(14):6663.

35.
36.

Simplified procedure for the quantitation of radioactive phosphoinositides by thin-layer chromatography.

Crosby SD, Dale GL.

J Chromatogr. 1985 Apr 26;323(2):462-4. No abstract available.

PMID:
2987282

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